Click here to switch to the map view.

The map label for this gene is comM [H]

Identifier: 170076988

GI number: 170076988

Start: 382207

End: 383736

Strand: Direct

Name: comM [H]

Synonym: SYNPCC7002_A0360

Alternate gene names: 170076988

Gene position: 382207-383736 (Clockwise)

Preceding gene: 170076986

Following gene: 170076991

Centisome position: 12.71

GC content: 54.25

Gene sequence:

>1530_bases
ATGCTAGCAAAAATTTGGAGTGCCACCATTGTCGGGGTCGATGCCCTCAGGGTCGGGGTGGAAGTGGATATTTCCGGCGG
CTTACCGAAAATGATGGTGGTCGGACTGCCGGATACAGCAGTACAAGAATCCCGGGAACGGGTCAAGGCTGCCCTCAAAA
ATTCTGGCTTCGGCTTCCCTGTGCGCAAAATTTTAGTCAATCTCACCCCTGCCGATCTCCGCAAGGAAGGCCCTAGTTTT
GATCTTCCCATTAGTGTGGGCATTTTGGCCGCGACGGAACAAATTGAAACAACGCTCCTAGAAGATTTTTTATTCCTGGG
GGAAGTGTCCCTCGATGGCACCCTCCGGCCTGTGGCAGGAGTTTTACCGATCGCCGCCGCCGCCCAAAAGTTAGGGTTTA
AGGGGATGGTCGTTCCCACTGCCAACGCCCAGGAAGCAGCAGTCGTAGCGGGTCTAACGGTTTATGGCTGTGGAAATTTA
AAGGAAGTGGCGGATCTGTTGGGGGCACCCCATGGGCATCAAGCTGTAAAAATCGATATCCGAGAGGCGATCGCCAAAGC
CGCCCACCTCGTCCCCGATCTCAAAGATGTCAAAGGCCAAACCCTAGCCCGTCGCGCCCTGGAGATTGCCGCCGCTGGGG
GCCATAATCTCGTTTTTGTGGGGCCACCCGGTAGCGGAAAAACGATGCTGGCTCGAAGATTACCGGGCATCTTGCCGAAA
CTGTCCTTCGATGAAGCCCTAGAAGTGTCGCAAATTCATTCCGTCGCTGGTTTACTCAAAGATCGTGGCACATTGGTAAC
AGCACGCCCTTTCCGTAGCCCCCACCATTCCGCCTCTGGCCCTTCCCTCGTTGGTGGAGGTAGTTTTCCGCGCCCAGGGG
AAATTTCCCTCGCCCATCGAGGAGTGTTGTTTCTTGATGAACTGACTGAGTTCAAACGTACTGTTTTGGAGTTTTTACGG
CAACCCCTCGAAGATGGTTTTGTCACCATTTCCCGCACCCGCCAGTCAGTGGAATTTCCCGCCCAATTTACCCTCGTTGC
CAGCACCAATCCCTGTCCTTGTGGTTATTTTGGCGACCCGATCCAAGCTTGCACTTGCAGTCCCCGCGCCCGCGAACAAT
ACTGGGCGAAACTTTCTGGGCCGTTGATGGATCGCATTGATCTCCAGGTAGCGGTCAATCGTCTGAAGCCAGAAGAAATG
ATGCAACAGGGTGTCGGTGAAGATTCTCACACCGTCGCAGAACGGGTTAACCAGGCGCGACAGATTGCCCAAGTGCGATT
TCAGGATCACCCCCAAGTGCACTGCAATGCGGAGATGACCACCAAGGATTTGCGGCAACATTGTGGCCTTGACCAAGGTA
GTCGTAATTTACTCGAAGGGGCAATCCGTAAGTTGGGATTATCGGCCCGGGCCATGGATCGGATTCTGAAGGTATCCCGG
ACAATTGCCGATTTAGCCGCCGCTCCAACCATCCAAACAGTCCACATTGCCGAAGCGATTCAATACCGCACCATTGACCG
AATGCAGTAG

Upstream 100 bases:

>100_bases
GTAGAAAAGAAACATAGCGCATAGGTCAAAGGGAAATCAAAGGGCGGGCGATCGCCAATTTTTCTATAATATTGTCCTAA
CAGCACACTAAAACAGAGCC

Downstream 100 bases:

>100_bases
CAGGTTTTAGGCAATGTCCTCAAGGACAAACCAAGGGGCAGCCTTGTTAATTCTGCCGATCGCCTGAATTTTTTGGGGAG
TCTGCAAATTTCCCAGCCAT

Product: AAA ATPase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MLAKIWSATIVGVDALRVGVEVDISGGLPKMMVVGLPDTAVQESRERVKAALKNSGFGFPVRKILVNLTPADLRKEGPSF
DLPISVGILAATEQIETTLLEDFLFLGEVSLDGTLRPVAGVLPIAAAAQKLGFKGMVVPTANAQEAAVVAGLTVYGCGNL
KEVADLLGAPHGHQAVKIDIREAIAKAAHLVPDLKDVKGQTLARRALEIAAAGGHNLVFVGPPGSGKTMLARRLPGILPK
LSFDEALEVSQIHSVAGLLKDRGTLVTARPFRSPHHSASGPSLVGGGSFPRPGEISLAHRGVLFLDELTEFKRTVLEFLR
QPLEDGFVTISRTRQSVEFPAQFTLVASTNPCPCGYFGDPIQACTCSPRAREQYWAKLSGPLMDRIDLQVAVNRLKPEEM
MQQGVGEDSHTVAERVNQARQIAQVRFQDHPQVHCNAEMTTKDLRQHCGLDQGSRNLLEGAIRKLGLSARAMDRILKVSR
TIADLAAAPTIQTVHIAEAIQYRTIDRMQ

Sequences:

>Translated_509_residues
MLAKIWSATIVGVDALRVGVEVDISGGLPKMMVVGLPDTAVQESRERVKAALKNSGFGFPVRKILVNLTPADLRKEGPSF
DLPISVGILAATEQIETTLLEDFLFLGEVSLDGTLRPVAGVLPIAAAAQKLGFKGMVVPTANAQEAAVVAGLTVYGCGNL
KEVADLLGAPHGHQAVKIDIREAIAKAAHLVPDLKDVKGQTLARRALEIAAAGGHNLVFVGPPGSGKTMLARRLPGILPK
LSFDEALEVSQIHSVAGLLKDRGTLVTARPFRSPHHSASGPSLVGGGSFPRPGEISLAHRGVLFLDELTEFKRTVLEFLR
QPLEDGFVTISRTRQSVEFPAQFTLVASTNPCPCGYFGDPIQACTCSPRAREQYWAKLSGPLMDRIDLQVAVNRLKPEEM
MQQGVGEDSHTVAERVNQARQIAQVRFQDHPQVHCNAEMTTKDLRQHCGLDQGSRNLLEGAIRKLGLSARAMDRILKVSR
TIADLAAAPTIQTVHIAEAIQYRTIDRMQ
>Mature_509_residues
MLAKIWSATIVGVDALRVGVEVDISGGLPKMMVVGLPDTAVQESRERVKAALKNSGFGFPVRKILVNLTPADLRKEGPSF
DLPISVGILAATEQIETTLLEDFLFLGEVSLDGTLRPVAGVLPIAAAAQKLGFKGMVVPTANAQEAAVVAGLTVYGCGNL
KEVADLLGAPHGHQAVKIDIREAIAKAAHLVPDLKDVKGQTLARRALEIAAAGGHNLVFVGPPGSGKTMLARRLPGILPK
LSFDEALEVSQIHSVAGLLKDRGTLVTARPFRSPHHSASGPSLVGGGSFPRPGEISLAHRGVLFLDELTEFKRTVLEFLR
QPLEDGFVTISRTRQSVEFPAQFTLVASTNPCPCGYFGDPIQACTCSPRAREQYWAKLSGPLMDRIDLQVAVNRLKPEEM
MQQGVGEDSHTVAERVNQARQIAQVRFQDHPQVHCNAEMTTKDLRQHCGLDQGSRNLLEGAIRKLGLSARAMDRILKVSR
TIADLAAAPTIQTVHIAEAIQYRTIDRMQ

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=509, Percent_Identity=44.4007858546169, Blast_Score=394, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 54803; Mature: 54803

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAKIWSATIVGVDALRVGVEVDISGGLPKMMVVGLPDTAVQESRERVKAALKNSGFGFP
CCCHHHHHHHEEHHHEEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCC
VRKILVNLTPADLRKEGPSFDLPISVGILAATEQIETTLLEDFLFLGEVSLDGTLRPVAG
HHHHHEECCCHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
VLPIAAAAQKLGFKGMVVPTANAQEAAVVAGLTVYGCGNLKEVADLLGAPHGHQAVKIDI
HHHHHHHHHHCCCCEEEEECCCCCCHHEEECEEEECCCCHHHHHHHHCCCCCCCEEEEEH
REAIAKAAHLVPDLKDVKGQTLARRALEIAAAGGHNLVFVGPPGSGKTMLARRLPGILPK
HHHHHHHHHHCCCHHHHCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCC
LSFDEALEVSQIHSVAGLLKDRGTLVTARPFRSPHHSASGPSLVGGGSFPRPGEISLAHR
CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEECCCCCCCCCCEEECCC
GVLFLDELTEFKRTVLEFLRQPLEDGFVTISRTRQSVEFPAQFTLVASTNPCPCGYFGDP
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCC
IQACTCSPRAREQYWAKLSGPLMDRIDLQVAVNRLKPEEMMQQGVGEDSHTVAERVNQAR
HHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHH
QIAQVRFQDHPQVHCNAEMTTKDLRQHCGLDQGSRNLLEGAIRKLGLSARAMDRILKVSR
HHHHHHHCCCCCEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
TIADLAAAPTIQTVHIAEAIQYRTIDRMQ
HHHHHHCCCCEEEHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLAKIWSATIVGVDALRVGVEVDISGGLPKMMVVGLPDTAVQESRERVKAALKNSGFGFP
CCCHHHHHHHEEHHHEEEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCC
VRKILVNLTPADLRKEGPSFDLPISVGILAATEQIETTLLEDFLFLGEVSLDGTLRPVAG
HHHHHEECCCHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
VLPIAAAAQKLGFKGMVVPTANAQEAAVVAGLTVYGCGNLKEVADLLGAPHGHQAVKIDI
HHHHHHHHHHCCCCEEEEECCCCCCHHEEECEEEECCCCHHHHHHHHCCCCCCCEEEEEH
REAIAKAAHLVPDLKDVKGQTLARRALEIAAAGGHNLVFVGPPGSGKTMLARRLPGILPK
HHHHHHHHHHCCCHHHHCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCCCC
LSFDEALEVSQIHSVAGLLKDRGTLVTARPFRSPHHSASGPSLVGGGSFPRPGEISLAHR
CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEECCCCCCCCCCEEECCC
GVLFLDELTEFKRTVLEFLRQPLEDGFVTISRTRQSVEFPAQFTLVASTNPCPCGYFGDP
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCC
IQACTCSPRAREQYWAKLSGPLMDRIDLQVAVNRLKPEEMMQQGVGEDSHTVAERVNQAR
HHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHH
QIAQVRFQDHPQVHCNAEMTTKDLRQHCGLDQGSRNLLEGAIRKLGLSARAMDRILKVSR
HHHHHHHCCCCCEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
TIADLAAAPTIQTVHIAEAIQYRTIDRMQ
HHHHHHCCCCEEEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]