| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is kefC [C]
Identifier: 170076911
GI number: 170076911
Start: 296736
End: 298775
Strand: Direct
Name: kefC [C]
Synonym: SYNPCC7002_A0283
Alternate gene names: 170076911
Gene position: 296736-298775 (Clockwise)
Preceding gene: 170076909
Following gene: 170076923
Centisome position: 9.86
GC content: 49.26
Gene sequence:
>2040_bases ATGGTTGCCGAATCGATCCAATACATCACAGAAAATCCGATTTTTACGTTTATTCTGCTGCTGTTGGTCTCTCTGACCAT TCCCCCTATTTTTGAACGGCTGAATTTACCTGGTTTGGTGGGCTTACTCTTTGCAGGGATTATCCTTGGTGAAAACGCCC TCGGTCTCCTCGACTCAGAGAGTGAAACCATGGTTTTGTTCTCGGAAGTGGGCAAAATTTACCTGATGTTTGTGGCCGGA TTGGAAATTAATTTGGCGGAGTTTCGGAAAACCCAAGATCGCTCCATTGGCTTTGGTTTTCTGACATTTATTGTGCCGTT AACGATGGGAACGGTGGTCGGCCTAAGTTTCGATTTTGGTTGGAATGCGGCAATTCTTATTGGATCTTTATTGGCTTCCC ATACGTTGCTGGGTTACCCAATTATTAACCGTTTGGGGATTCTCAATAATGAGAGTGTAACGGTCACGATTGGCGCGACG ATTTTTACGGACATTGCGGCTCTTTTGGTGCTGGCGATCTGTGTGTCGATTCACCAGGGCGATTTTTCTACGGCTTCTTT GGTCTTGCAACTGGCGTTATTGGTGGGCTACGGAGCTTTGGTACTCTTCGGTCTGTCCTGGCTTGGTCGAGAATTTTTCC AGCGCAATGGGGATGAAGAGGGCAATCAATTTCTATTTATTTTGCTGGCTGTCTTTCTCGCGTCAGTGGGGGCCCAGGTG ATCAATGTGGATAAAATTGTGGGGGCTTTTTTGGCGGGTTTAGCGGTCAATGATGTGGTCGGCAAAAGCCCGGTAGAGGA AAAAATCGAATTTGTCGGCAGTACGCTATTTATTCCATTCTTCTTTGTGGGGATGGGGTTATTGCTCGATATTCCGGCAT TTATTAATAATTTGCTCTATGAGTTTCCCCTCACGTTTTCGATTGTGGGTGGGTTGTTGTTGTCTAAATTTATCGCGGCG GCGATCGCCAAACAGATTTATCGTTATAGCTGGGCCGAAACCCTCACGATGTGGTCGTTGTCGATCCCCCAGGTGGCGGC AACCCTGGCGGCGGCCTTGGTTGGTTTCCGGGTGGGACTGATCAGCGAATCAGTATTTAATGCGGTGATTGTGCTGATGC TAGTCACTTCGATGCTGGGGCCGGTGTTAACCCGTCGTTTTGGTCGTTTATTACCCAGTAGTGGCAAGGATATTGCCCTG ACAACGGTTAAGGTGTCGCCATCGACGGATCGGTTCAAAATTGTTGTACCCATTGCTAATCCCAGCACCAAGGATTATTT ACTCGAAGCGGCAGGGCTTTTAACCCGCATTCGTCAAGGGGTTGTGATGCCTGTGTCGATTGTGACGGGCCACGCCCACA TGGATGATCCGGCAGTGATGACGGGGATCGACCGGAGTCAAAGCTTACTCCAAGAGGCGATCGCCCAGGGGGAGCAACTG CAAATTACAATGCAACCAAAAATTCGCATCGATGACGATGTGGCCGCCGGGATCAGTCGCGTGGCCCGGGAAGAAAATGC CAACTTAATTTTGATGGGCTGGGGAAAAACCGAGGGTCTCAAAGCAAGGCTCCTGGGGACTTTAATTCACAATGTCTGTT GGTCTGCCCATTGCCCGGTGGCGGTGGTGCGTCTGCTGGATGACCCGAAAAATTTGCGGCGGATTATGGTGCCCTTCAAG GGAATTTCGGCCCAAAATTTACAGATAGTTCAATTTGCAGAACTTTTGGCGATCGCCAACCAAGCCGAAGTCACCGTCTT CCATGTGTGCGAAACCTGGATGACCAAAGACCAACGCAATTTGCTCAAAGCCGACCTAGAAAATGCCCTGCAAAATGCCG GAATCACCACCAAAATGCAGATTCGGATCATCCGTTACCACGACGTGGCCAAGGCAATTCTCCATGACGCCAAAGACTTC GATCTTGTCATTCTGCACTCTACCCGTTACCGTACCGCCGGAGGCCTAGCTGTGGGCGATGTCACCACAAAAATTTCGAG CCAAATCCAAACATCCGTCGTCATTTTCAACGAACTCTAA
Upstream 100 bases:
>100_bases AAGGGCCAAAATTCCCTGTTTTTGCCATAAAATCGACAATTTATTTTCGTTATAAACTTCTTCCGCTACACTGGGAGGCT AGCCTTTTTCTCGGACTGCC
Downstream 100 bases:
>100_bases CCCTCATTCGCCTAACAAAAGTAGCGTTTTTTAAAGTTCAACCTAAAGCCAGTGCTTTGGATAAGGACGTCCCGGCACCA CACGACTAAAAATTACCGTC
Product: Sodium/hydrogen exchanger family protein
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: MjNapA [H]
Number of amino acids: Translated: 679; Mature: 679
Protein sequence:
>679_residues MVAESIQYITENPIFTFILLLLVSLTIPPIFERLNLPGLVGLLFAGIILGENALGLLDSESETMVLFSEVGKIYLMFVAG LEINLAEFRKTQDRSIGFGFLTFIVPLTMGTVVGLSFDFGWNAAILIGSLLASHTLLGYPIINRLGILNNESVTVTIGAT IFTDIAALLVLAICVSIHQGDFSTASLVLQLALLVGYGALVLFGLSWLGREFFQRNGDEEGNQFLFILLAVFLASVGAQV INVDKIVGAFLAGLAVNDVVGKSPVEEKIEFVGSTLFIPFFFVGMGLLLDIPAFINNLLYEFPLTFSIVGGLLLSKFIAA AIAKQIYRYSWAETLTMWSLSIPQVAATLAAALVGFRVGLISESVFNAVIVLMLVTSMLGPVLTRRFGRLLPSSGKDIAL TTVKVSPSTDRFKIVVPIANPSTKDYLLEAAGLLTRIRQGVVMPVSIVTGHAHMDDPAVMTGIDRSQSLLQEAIAQGEQL QITMQPKIRIDDDVAAGISRVAREENANLILMGWGKTEGLKARLLGTLIHNVCWSAHCPVAVVRLLDDPKNLRRIMVPFK GISAQNLQIVQFAELLAIANQAEVTVFHVCETWMTKDQRNLLKADLENALQNAGITTKMQIRIIRYHDVAKAILHDAKDF DLVILHSTRYRTAGGLAVGDVTTKISSQIQTSVVIFNEL
Sequences:
>Translated_679_residues MVAESIQYITENPIFTFILLLLVSLTIPPIFERLNLPGLVGLLFAGIILGENALGLLDSESETMVLFSEVGKIYLMFVAG LEINLAEFRKTQDRSIGFGFLTFIVPLTMGTVVGLSFDFGWNAAILIGSLLASHTLLGYPIINRLGILNNESVTVTIGAT IFTDIAALLVLAICVSIHQGDFSTASLVLQLALLVGYGALVLFGLSWLGREFFQRNGDEEGNQFLFILLAVFLASVGAQV INVDKIVGAFLAGLAVNDVVGKSPVEEKIEFVGSTLFIPFFFVGMGLLLDIPAFINNLLYEFPLTFSIVGGLLLSKFIAA AIAKQIYRYSWAETLTMWSLSIPQVAATLAAALVGFRVGLISESVFNAVIVLMLVTSMLGPVLTRRFGRLLPSSGKDIAL TTVKVSPSTDRFKIVVPIANPSTKDYLLEAAGLLTRIRQGVVMPVSIVTGHAHMDDPAVMTGIDRSQSLLQEAIAQGEQL QITMQPKIRIDDDVAAGISRVAREENANLILMGWGKTEGLKARLLGTLIHNVCWSAHCPVAVVRLLDDPKNLRRIMVPFK GISAQNLQIVQFAELLAIANQAEVTVFHVCETWMTKDQRNLLKADLENALQNAGITTKMQIRIIRYHDVAKAILHDAKDF DLVILHSTRYRTAGGLAVGDVTTKISSQIQTSVVIFNEL >Mature_679_residues MVAESIQYITENPIFTFILLLLVSLTIPPIFERLNLPGLVGLLFAGIILGENALGLLDSESETMVLFSEVGKIYLMFVAG LEINLAEFRKTQDRSIGFGFLTFIVPLTMGTVVGLSFDFGWNAAILIGSLLASHTLLGYPIINRLGILNNESVTVTIGAT IFTDIAALLVLAICVSIHQGDFSTASLVLQLALLVGYGALVLFGLSWLGREFFQRNGDEEGNQFLFILLAVFLASVGAQV INVDKIVGAFLAGLAVNDVVGKSPVEEKIEFVGSTLFIPFFFVGMGLLLDIPAFINNLLYEFPLTFSIVGGLLLSKFIAA AIAKQIYRYSWAETLTMWSLSIPQVAATLAAALVGFRVGLISESVFNAVIVLMLVTSMLGPVLTRRFGRLLPSSGKDIAL TTVKVSPSTDRFKIVVPIANPSTKDYLLEAAGLLTRIRQGVVMPVSIVTGHAHMDDPAVMTGIDRSQSLLQEAIAQGEQL QITMQPKIRIDDDVAAGISRVAREENANLILMGWGKTEGLKARLLGTLIHNVCWSAHCPVAVVRLLDDPKNLRRIMVPFK GISAQNLQIVQFAELLAIANQAEVTVFHVCETWMTKDQRNLLKADLENALQNAGITTKMQIRIIRYHDVAKAILHDAKDF DLVILHSTRYRTAGGLAVGDVTTKISSQIQTSVVIFNEL
Specific function: This is probably a Na(+)/H(+) antiporter [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family [H]
Homologues:
Organism=Escherichia coli, GI1786232, Length=285, Percent_Identity=28.7719298245614, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1789749, Length=282, Percent_Identity=25.531914893617, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322367, Length=424, Percent_Identity=22.4056603773585, Blast_Score=92, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 73858; Mature: 73858
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00289 PENTAXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAESIQYITENPIFTFILLLLVSLTIPPIFERLNLPGLVGLLFAGIILGENALGLLDSE CCCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC SETMVLFSEVGKIYLMFVAGLEINLAEFRKTQDRSIGFGFLTFIVPLTMGTVVGLSFDFG CCCEEEHHHHHHHHHHHHHCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEECCC WNAAILIGSLLASHTLLGYPIINRLGILNNESVTVTIGATIFTDIAALLVLAICVSIHQG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCC DFSTASLVLQLALLVGYGALVLFGLSWLGREFFQRNGDEEGNQFLFILLAVFLASVGAQV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHH INVDKIVGAFLAGLAVNDVVGKSPVEEKIEFVGSTLFIPFFFVGMGLLLDIPAFINNLLY HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFPLTFSIVGGLLLSKFIAAAIAKQIYRYSWAETLTMWSLSIPQVAATLAAALVGFRVGL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ISESVFNAVIVLMLVTSMLGPVLTRRFGRLLPSSGKDIALTTVKVSPSTDRFKIVVPIAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEECC PSTKDYLLEAAGLLTRIRQGVVMPVSIVTGHAHMDDPAVMTGIDRSQSLLQEAIAQGEQL CCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHEECCCHHHHHHHHHHCCCCEE QITMQPKIRIDDDVAAGISRVAREENANLILMGWGKTEGLKARLLGTLIHNVCWSAHCPV EEEECCCEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHH AVVRLLDDPKNLRRIMVPFKGISAQNLQIVQFAELLAIANQAEVTVFHVCETWMTKDQRN HHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHCHHHHH LLKADLENALQNAGITTKMQIRIIRYHDVAKAILHDAKDFDLVILHSTRYRTAGGLAVGD HHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEECH VTTKISSQIQTSVVIFNEL HHHHHHHHHHEEEEEEECC >Mature Secondary Structure MVAESIQYITENPIFTFILLLLVSLTIPPIFERLNLPGLVGLLFAGIILGENALGLLDSE CCCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC SETMVLFSEVGKIYLMFVAGLEINLAEFRKTQDRSIGFGFLTFIVPLTMGTVVGLSFDFG CCCEEEHHHHHHHHHHHHHCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHHHHEEEECCC WNAAILIGSLLASHTLLGYPIINRLGILNNESVTVTIGATIFTDIAALLVLAICVSIHQG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCC DFSTASLVLQLALLVGYGALVLFGLSWLGREFFQRNGDEEGNQFLFILLAVFLASVGAQV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCHHH INVDKIVGAFLAGLAVNDVVGKSPVEEKIEFVGSTLFIPFFFVGMGLLLDIPAFINNLLY HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EFPLTFSIVGGLLLSKFIAAAIAKQIYRYSWAETLTMWSLSIPQVAATLAAALVGFRVGL HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ISESVFNAVIVLMLVTSMLGPVLTRRFGRLLPSSGKDIALTTVKVSPSTDRFKIVVPIAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEECC PSTKDYLLEAAGLLTRIRQGVVMPVSIVTGHAHMDDPAVMTGIDRSQSLLQEAIAQGEQL CCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHEECCCHHHHHHHHHHCCCCEE QITMQPKIRIDDDVAAGISRVAREENANLILMGWGKTEGLKARLLGTLIHNVCWSAHCPV EEEECCCEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHH AVVRLLDDPKNLRRIMVPFKGISAQNLQIVQFAELLAIANQAEVTVFHVCETWMTKDQRN HHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHCHHHHH LLKADLENALQNAGITTKMQIRIIRYHDVAKAILHDAKDFDLVILHSTRYRTAGGLAVGD HHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEECH VTTKISSQIQTSVVIFNEL HHHHHHHHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]