Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170076899

Identifier: 170076899

GI number: 170076899

Start: 284712

End: 286823

Strand: Direct

Name: 170076899

Synonym: SYNPCC7002_A0271

Alternate gene names: NA

Gene position: 284712-286823 (Clockwise)

Preceding gene: 170076897

Following gene: 170076901

Centisome position: 9.47

GC content: 51.94

Gene sequence:

>2112_bases
ATGACCAACCCAACCCGAATTTTGATGTGTGCTCCCGACCATTACGAGGTGGACTATGTCATTAACCCTTGGATGGAAGG
AAACGTCCACAAATCGTCCCAAGCTCAAGCCATTGAACAGTGGCAGGCCCTACATCAAATCATCAAAGAATATGCCGTTG
TTGACCTCGTGCCCCCTGCCCAGGGCTGGCCAGATATGGTTTTTACGGCCAATGCCGGCCTAGTCTTGGGTCAAAAAGCG
ATTCTCAGTCGTTTCTATCACCCAGAGCGCCAAGGGGAAGAACCCTACTTTAAGCAATGGTTTGCGGAAAATGGTTTCCA
GGTCTATGAGCTGCCCCAGGATTTGCCCTTTGAAGGGGCAGGGGATGCCCTCTTTGACCGGGATTCTGGAGCGTTGTGGG
CCGGTTATGGTTTTCGCTCTGAACTCGACTCCCACGCCTACATTGCCCAGTGGCTCGATGTGGAAGTTTTATCCCTACGC
CTGATCGATCCCCGCTTTTATCACCTCGATACTTGCTTCTGTCCCCTCAGCGGCGGCTATCTCCTCTACTATCCCCCTGC
CTTTGATACGTACTCCAATGCCCTAATTGAGCGGCGGATTCCGGCGGAAAAACGTATTGTTGTCCCCGAGCCGGATGCGG
TGAACTTTGCCTGCAATGCGGTCAATGTCGATGATGTGATCATCATGAATAAAATCAGCCCAGAACTCGAAACGGCGATC
GCCACCAAGGGCTTTCAGGTGCGGCAAACGTCCCTCACGGAATTTCTCAAGGCAGGGGGAGCTGCAAAATGTTTAACCCT
AAAAACCACAGAACCGATTCAAGAAACTGCCCAAGCCAATGCTCCGGTGGATAGTCGGATTATTCACCTCGAAGGGCACC
TCCTCGATGCGGGCATTTTGAACCAAGCCTTGGATTTAATCAATGAACAGGGCGGCAGTGCAAAAGTATTAAATTTCAAC
CTCGGCATCGAGCGAAAAAATACGTCATCGGCCAATGTACGGGTATCCGCACCCTCTCCCACCACCATGGAGGACATTAT
GTCCGCCCTTATTGAAATGGGCGCGATCAGTGCTTCGGCAGAAGATATTCAGGATGCACACCTAGAAACCGTGAAGCAAA
TGGGAGTCGCCCCCGATGATTTTTATGTCACGAATATCTATCCCACGGAGGTCAGGATTAAAGGCCAATGGGTTAAGGTG
ACCCACCAACGGATGGACGGGGCGATCGCCATTAGTGAGAGCAACGGCACTATTCATGCCCGCTGTCGTCTGTTGCGGGA
TCTCCAGGTGGGAGAAAAAGTTGTTGTGGGCATCGACGGGATTCGCACCAACCATAAAACCACCGCTCGCCCCAGTGCCG
AAAAACAAGAATTTAGCTTCATGGGGGCCGGGGTTTCGAGTGAACGCCGTGTGGAATTGGTCGTTGAGCAAATTGCCTGG
GAACTCCATAAAATCCGTGCCCAGGGTGGAAAAGTTGCGGTCACGGCTGGGCCAGTGGTGATCCATACCGGGGGGGCGCA
ACATCTCGCCAATTTAATTCGCCAGGGCTATGTCCATACTTTGCTCGGTGGGAATGCGATCGCCGTCCACGACATTGAAC
AATCAATGATGGGTACTTCCCTCGGCGTTGATATGAATAAAGGCGTTCCCGTGCGTGGGGGACACCGTCACCACCTCAAG
GTAATTAATACTATTCGTCGCTGTGGCAGTATCGCCAATGCCGTGGCCCAGGGGCTCATTACAAAGGGGGTAATGTATGA
ATGCGTCCAAAATAATGTGCCCTTCTGTTTAGCCGGATCTATTCGTGATGATGGCCCTCTCCCCGATACAGAAATGGATC
TGATTCGCGCCCAGGAAGAATATGCTCGCTTGCTAGAAGGCACCAATATGGTTTTGATGCTTTCGACGATGCTCCATTCC
ATTGGCGTCGGCAATATGACTCCTGCCGGGGTGAAGATGGTCTGTGTCGATATTAATCCTGCGGTAGTCACAAAACTAAG
CGATCGCGGCTCGGTAGAATCCGTCGGTGTAGTCACCGATGTGGGGTTATTCCTCAGTCTCCTGACGCGCCAACTGGATC
GACTCAACCAAAAAGCTGCAATTACTGTGTAA

Upstream 100 bases:

>100_bases
CGCCACAGAAAACAGGGTTTTGTACCGTACCGATCAATACAATTCGCCCGCTTTTCCCGTTGCATGATTAGTCCTAAACC
ATTCAGCTTTTAAATTGACC

Downstream 100 bases:

>100_bases
TTCCCGGAACAGCCTAGGCGATCGCCAAAAAACTCCCTCGGAAAGTCTGGGGAGTTTTTTTGTTGCTGCTCCCGAATCAT
GGCAATTAAAAAAACCACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 703; Mature: 702

Protein sequence:

>703_residues
MTNPTRILMCAPDHYEVDYVINPWMEGNVHKSSQAQAIEQWQALHQIIKEYAVVDLVPPAQGWPDMVFTANAGLVLGQKA
ILSRFYHPERQGEEPYFKQWFAENGFQVYELPQDLPFEGAGDALFDRDSGALWAGYGFRSELDSHAYIAQWLDVEVLSLR
LIDPRFYHLDTCFCPLSGGYLLYYPPAFDTYSNALIERRIPAEKRIVVPEPDAVNFACNAVNVDDVIIMNKISPELETAI
ATKGFQVRQTSLTEFLKAGGAAKCLTLKTTEPIQETAQANAPVDSRIIHLEGHLLDAGILNQALDLINEQGGSAKVLNFN
LGIERKNTSSANVRVSAPSPTTMEDIMSALIEMGAISASAEDIQDAHLETVKQMGVAPDDFYVTNIYPTEVRIKGQWVKV
THQRMDGAIAISESNGTIHARCRLLRDLQVGEKVVVGIDGIRTNHKTTARPSAEKQEFSFMGAGVSSERRVELVVEQIAW
ELHKIRAQGGKVAVTAGPVVIHTGGAQHLANLIRQGYVHTLLGGNAIAVHDIEQSMMGTSLGVDMNKGVPVRGGHRHHLK
VINTIRRCGSIANAVAQGLITKGVMYECVQNNVPFCLAGSIRDDGPLPDTEMDLIRAQEEYARLLEGTNMVLMLSTMLHS
IGVGNMTPAGVKMVCVDINPAVVTKLSDRGSVESVGVVTDVGLFLSLLTRQLDRLNQKAAITV

Sequences:

>Translated_703_residues
MTNPTRILMCAPDHYEVDYVINPWMEGNVHKSSQAQAIEQWQALHQIIKEYAVVDLVPPAQGWPDMVFTANAGLVLGQKA
ILSRFYHPERQGEEPYFKQWFAENGFQVYELPQDLPFEGAGDALFDRDSGALWAGYGFRSELDSHAYIAQWLDVEVLSLR
LIDPRFYHLDTCFCPLSGGYLLYYPPAFDTYSNALIERRIPAEKRIVVPEPDAVNFACNAVNVDDVIIMNKISPELETAI
ATKGFQVRQTSLTEFLKAGGAAKCLTLKTTEPIQETAQANAPVDSRIIHLEGHLLDAGILNQALDLINEQGGSAKVLNFN
LGIERKNTSSANVRVSAPSPTTMEDIMSALIEMGAISASAEDIQDAHLETVKQMGVAPDDFYVTNIYPTEVRIKGQWVKV
THQRMDGAIAISESNGTIHARCRLLRDLQVGEKVVVGIDGIRTNHKTTARPSAEKQEFSFMGAGVSSERRVELVVEQIAW
ELHKIRAQGGKVAVTAGPVVIHTGGAQHLANLIRQGYVHTLLGGNAIAVHDIEQSMMGTSLGVDMNKGVPVRGGHRHHLK
VINTIRRCGSIANAVAQGLITKGVMYECVQNNVPFCLAGSIRDDGPLPDTEMDLIRAQEEYARLLEGTNMVLMLSTMLHS
IGVGNMTPAGVKMVCVDINPAVVTKLSDRGSVESVGVVTDVGLFLSLLTRQLDRLNQKAAITV
>Mature_702_residues
TNPTRILMCAPDHYEVDYVINPWMEGNVHKSSQAQAIEQWQALHQIIKEYAVVDLVPPAQGWPDMVFTANAGLVLGQKAI
LSRFYHPERQGEEPYFKQWFAENGFQVYELPQDLPFEGAGDALFDRDSGALWAGYGFRSELDSHAYIAQWLDVEVLSLRL
IDPRFYHLDTCFCPLSGGYLLYYPPAFDTYSNALIERRIPAEKRIVVPEPDAVNFACNAVNVDDVIIMNKISPELETAIA
TKGFQVRQTSLTEFLKAGGAAKCLTLKTTEPIQETAQANAPVDSRIIHLEGHLLDAGILNQALDLINEQGGSAKVLNFNL
GIERKNTSSANVRVSAPSPTTMEDIMSALIEMGAISASAEDIQDAHLETVKQMGVAPDDFYVTNIYPTEVRIKGQWVKVT
HQRMDGAIAISESNGTIHARCRLLRDLQVGEKVVVGIDGIRTNHKTTARPSAEKQEFSFMGAGVSSERRVELVVEQIAWE
LHKIRAQGGKVAVTAGPVVIHTGGAQHLANLIRQGYVHTLLGGNAIAVHDIEQSMMGTSLGVDMNKGVPVRGGHRHHLKV
INTIRRCGSIANAVAQGLITKGVMYECVQNNVPFCLAGSIRDDGPLPDTEMDLIRAQEEYARLLEGTNMVLMLSTMLHSI
GVGNMTPAGVKMVCVDINPAVVTKLSDRGSVESVGVVTDVGLFLSLLTRQLDRLNQKAAITV

Specific function: Unknown

COG id: COG1915

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI25147433, Length=273, Percent_Identity=41.7582417582418, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71998636, Length=265, Percent_Identity=40, Blast_Score=201, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17540300, Length=273, Percent_Identity=39.1941391941392, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI71998638, Length=103, Percent_Identity=42.7184466019417, Blast_Score=90, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005239
- InterPro:   IPR007545 [H]

Pfam domain/function: PF04455 Saccharop_dh_N [H]

EC number: NA

Molecular weight: Translated: 77038; Mature: 76907

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNPTRILMCAPDHYEVDYVINPWMEGNVHKSSQAQAIEQWQALHQIIKEYAVVDLVPPA
CCCCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCC
QGWPDMVFTANAGLVLGQKAILSRFYHPERQGEEPYFKQWFAENGFQVYELPQDLPFEGA
CCCCCEEEEECCCEEECHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCC
GDALFDRDSGALWAGYGFRSELDSHAYIAQWLDVEVLSLRLIDPRFYHLDTCFCPLSGGY
CCCEEECCCCCEEECCCCHHHCCCHHHHHHHHCEEEEEEEEECCCEEEEEEEEEECCCCE
LLYYPPAFDTYSNALIERRIPAEKRIVVPEPDAVNFACNAVNVDDVIIMNKISPELETAI
EEEECCCCCHHHHHHHHHCCCCCCEEECCCCCCCEEEEEECCCCCEEEEECCCCHHHHHH
ATKGFQVRQTSLTEFLKAGGAAKCLTLKTTEPIQETAQANAPVDSRIIHLEGHLLDAGIL
HCCCCEEHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCCCEEEEEECCEECHHHH
NQALDLINEQGGSAKVLNFNLGIERKNTSSANVRVSAPSPTTMEDIMSALIEMGAISASA
HHHHHHHHCCCCCEEEEEEEECEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCH
EDIQDAHLETVKQMGVAPDDFYVTNIYPTEVRIKGQWVKVTHQRMDGAIAISESNGTIHA
HHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEECEEEEEEHHHCCCEEEEECCCCEEHH
RCRLLRDLQVGEKVVVGIDGIRTNHKTTARPSAEKQEFSFMGAGVSSERRVELVVEQIAW
HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHH
ELHKIRAQGGKVAVTAGPVVIHTGGAQHLANLIRQGYVHTLLGGNAIAVHDIEQSMMGTS
HHHHHHHCCCEEEEEECCEEEECCCHHHHHHHHHCCCEEEEECCCEEEEEEHHHHHCCCC
LGVDMNKGVPVRGGHRHHLKVINTIRRCGSIANAVAQGLITKGVMYECVQNNVPFCLAGS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
IRDDGPLPDTEMDLIRAQEEYARLLEGTNMVLMLSTMLHSIGVGNMTPAGVKMVCVDINP
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCEEEEEEECCH
AVVTKLSDRGSVESVGVVTDVGLFLSLLTRQLDRLNQKAAITV
HHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECC
>Mature Secondary Structure 
TNPTRILMCAPDHYEVDYVINPWMEGNVHKSSQAQAIEQWQALHQIIKEYAVVDLVPPA
CCCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCC
QGWPDMVFTANAGLVLGQKAILSRFYHPERQGEEPYFKQWFAENGFQVYELPQDLPFEGA
CCCCCEEEEECCCEEECHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCC
GDALFDRDSGALWAGYGFRSELDSHAYIAQWLDVEVLSLRLIDPRFYHLDTCFCPLSGGY
CCCEEECCCCCEEECCCCHHHCCCHHHHHHHHCEEEEEEEEECCCEEEEEEEEEECCCCE
LLYYPPAFDTYSNALIERRIPAEKRIVVPEPDAVNFACNAVNVDDVIIMNKISPELETAI
EEEECCCCCHHHHHHHHHCCCCCCEEECCCCCCCEEEEEECCCCCEEEEECCCCHHHHHH
ATKGFQVRQTSLTEFLKAGGAAKCLTLKTTEPIQETAQANAPVDSRIIHLEGHLLDAGIL
HCCCCEEHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCCCEEEEEECCEECHHHH
NQALDLINEQGGSAKVLNFNLGIERKNTSSANVRVSAPSPTTMEDIMSALIEMGAISASA
HHHHHHHHCCCCCEEEEEEEECEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCH
EDIQDAHLETVKQMGVAPDDFYVTNIYPTEVRIKGQWVKVTHQRMDGAIAISESNGTIHA
HHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEECEEEEEEHHHCCCEEEEECCCCEEHH
RCRLLRDLQVGEKVVVGIDGIRTNHKTTARPSAEKQEFSFMGAGVSSERRVELVVEQIAW
HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHH
ELHKIRAQGGKVAVTAGPVVIHTGGAQHLANLIRQGYVHTLLGGNAIAVHDIEQSMMGTS
HHHHHHHCCCEEEEEECCEEEECCCHHHHHHHHHCCCEEEEECCCEEEEEEHHHHHCCCC
LGVDMNKGVPVRGGHRHHLKVINTIRRCGSIANAVAQGLITKGVMYECVQNNVPFCLAGS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
IRDDGPLPDTEMDLIRAQEEYARLLEGTNMVLMLSTMLHSIGVGNMTPAGVKMVCVDINP
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCEEEEEEECCH
AVVTKLSDRGSVESVGVVTDVGLFLSLLTRQLDRLNQKAAITV
HHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]