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The map label for this gene is hypE [H]

Identifier: 170076825

GI number: 170076825

Start: 204923

End: 205969

Strand: Direct

Name: hypE [H]

Synonym: SYNPCC7002_A0194

Alternate gene names: 170076825

Gene position: 204923-205969 (Clockwise)

Preceding gene: 170076821

Following gene: 170076826

Centisome position: 6.81

GC content: 52.82

Gene sequence:

>1047_bases
ATGGATTTAACCTGCCCGCTTCCCTTACAAAATACTTCCCATGTACTGTTAGCCCATGGCGGCGGTGGCAAACTGATGCA
AGACCTCATCGACAAAATGTTTGCCACGGCCTTTGGTGAGCCTTGCACGAGCCATGATGCAGCGGCCTTACCAGTATCGA
CGGAGAAACTCGCGTTTACGACGGATTCCTATGTGGTGCAGCCCCTCTTTTTTCCGGGGGGAGACATTGGCAAATTAGCG
ATTTACGGCACGGTGAATGATCTGGCGATGGCGGGAGCGCGGCCCCTGTACCTTAGTGTGGGCTTCATTTTAGAAGAAGG
CTTGCCCTTAGAAACCCTCTGGCAGGTGGTGGTCTCGATGCAGCAGGCGGCCCAGGTCGTCGGCGTACAGATCGTCACGG
GGGATACGAAGGTGGTGGAGCGGGGTAAGGGAGATGGTCTGTTTATCAACACATCAGGCATTGGCATTATTGAATCTAGG
CTTAATATTCAACCAAAGGCGATCGCCCCTGGGGATACGATTTTAGTCAGCGGAGATCTCGGTCGCCATGGCATCGCGAT
TATGGCCCAGCGGGAGGGGTTAGCCTTTGAAAGTCCCATTGAAAGTGACTGTGCCCCCTTGGTGGAGCCGGTACAGGATT
TGTTAAAAGCAGGAATTGAGATTCATTGTTTACGGGATATCACGCGGGGTGGGCTAGGGGCGGTCTTGAATGAGTTGGCG
ATCGCCGCTGGATATCAGTTTAAAGTCCATGGCAATCAAATTCCTGTAATCGAAGCGGTGCGCGGGGCCTGTGAAATTTT
TGGCTTTGACCCGGTACACATTGCCAATGAGGGCCGCTTTGTGGCGATTTTGCCAGAGGCGAGGGCGGCTGAAGGCTTGG
CTCTTTTGCAGCATTACAATGCCAACGCCCGCCAAATTGGTCTCGTGACGACCCAAAACTGTGGGGAACAACATTTGGCG
ATCGCCCCCGTGGTTGTAGAAAATGATCTGGGGGTAACACGCATTTTAGAACGTCTGAGTGGTGAACAATTACCGCGAAT
TTGTTAA

Upstream 100 bases:

>100_bases
CTTCAGGATTTGAACTTTCATTACCCAAAGTGATGGCGGGGTTCTTTTTCCCTTGGGGAGGCGCTACCTTAAACGAAAAA
ATAACAAGCAATACGCCCCC

Downstream 100 bases:

>100_bases
GTATTTTTTGTACATTGATTAAAATTATGAGCTGCCAATTTTTTCCGGAATTAAACAACAAAATAATTGTTTTATAGCGC
GATCAAATTTATATTAATTC

Product: hydrogenase expression/formation protein HypE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MDLTCPLPLQNTSHVLLAHGGGGKLMQDLIDKMFATAFGEPCTSHDAAALPVSTEKLAFTTDSYVVQPLFFPGGDIGKLA
IYGTVNDLAMAGARPLYLSVGFILEEGLPLETLWQVVVSMQQAAQVVGVQIVTGDTKVVERGKGDGLFINTSGIGIIESR
LNIQPKAIAPGDTILVSGDLGRHGIAIMAQREGLAFESPIESDCAPLVEPVQDLLKAGIEIHCLRDITRGGLGAVLNELA
IAAGYQFKVHGNQIPVIEAVRGACEIFGFDPVHIANEGRFVAILPEARAAEGLALLQHYNANARQIGLVTTQNCGEQHLA
IAPVVVENDLGVTRILERLSGEQLPRIC

Sequences:

>Translated_348_residues
MDLTCPLPLQNTSHVLLAHGGGGKLMQDLIDKMFATAFGEPCTSHDAAALPVSTEKLAFTTDSYVVQPLFFPGGDIGKLA
IYGTVNDLAMAGARPLYLSVGFILEEGLPLETLWQVVVSMQQAAQVVGVQIVTGDTKVVERGKGDGLFINTSGIGIIESR
LNIQPKAIAPGDTILVSGDLGRHGIAIMAQREGLAFESPIESDCAPLVEPVQDLLKAGIEIHCLRDITRGGLGAVLNELA
IAAGYQFKVHGNQIPVIEAVRGACEIFGFDPVHIANEGRFVAILPEARAAEGLALLQHYNANARQIGLVTTQNCGEQHLA
IAPVVVENDLGVTRILERLSGEQLPRIC
>Mature_348_residues
MDLTCPLPLQNTSHVLLAHGGGGKLMQDLIDKMFATAFGEPCTSHDAAALPVSTEKLAFTTDSYVVQPLFFPGGDIGKLA
IYGTVNDLAMAGARPLYLSVGFILEEGLPLETLWQVVVSMQQAAQVVGVQIVTGDTKVVERGKGDGLFINTSGIGIIESR
LNIQPKAIAPGDTILVSGDLGRHGIAIMAQREGLAFESPIESDCAPLVEPVQDLLKAGIEIHCLRDITRGGLGAVLNELA
IAAGYQFKVHGNQIPVIEAVRGACEIFGFDPVHIANEGRFVAILPEARAAEGLALLQHYNANARQIGLVTTQNCGEQHLA
IAPVVVENDLGVTRILERLSGEQLPRIC

Specific function: May be involved in the maturation of the nifE hydrogenase [H]

COG id: COG0309

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypE family [H]

Homologues:

Organism=Escherichia coli, GI226510967, Length=348, Percent_Identity=44.5402298850575, Blast_Score=265, Evalue=3e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR011854
- InterPro:   IPR016188 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: NA

Molecular weight: Translated: 36922; Mature: 36922

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLTCPLPLQNTSHVLLAHGGGGKLMQDLIDKMFATAFGEPCTSHDAAALPVSTEKLAFT
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEE
TDSYVVQPLFFPGGDIGKLAIYGTVNDLAMAGARPLYLSVGFILEEGLPLETLWQVVVSM
CCCEEEEEEECCCCCCCCEEEEECHHHHHHCCCCEEEEEEEEHHCCCCCHHHHHHHHHHH
QQAAQVVGVQIVTGDTKVVERGKGDGLFINTSGIGIIESRLNIQPKAIAPGDTILVSGDL
HHHHHEEEEEEEECCHHHHHCCCCCEEEEECCCCEEEECCCCCCCCEECCCCEEEEECCC
GRHGIAIMAQREGLAFESPIESDCAPLVEPVQDLLKAGIEIHCLRDITRGGLGAVLNELA
CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHCCCHHHHHHHHH
IAAGYQFKVHGNQIPVIEAVRGACEIFGFDPVHIANEGRFVAILPEARAAEGLALLQHYN
HHCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHCC
ANARQIGLVTTQNCGEQHLAIAPVVVENDLGVTRILERLSGEQLPRIC
CCCEEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDLTCPLPLQNTSHVLLAHGGGGKLMQDLIDKMFATAFGEPCTSHDAAALPVSTEKLAFT
CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEE
TDSYVVQPLFFPGGDIGKLAIYGTVNDLAMAGARPLYLSVGFILEEGLPLETLWQVVVSM
CCCEEEEEEECCCCCCCCEEEEECHHHHHHCCCCEEEEEEEEHHCCCCCHHHHHHHHHHH
QQAAQVVGVQIVTGDTKVVERGKGDGLFINTSGIGIIESRLNIQPKAIAPGDTILVSGDL
HHHHHEEEEEEEECCHHHHHCCCCCEEEEECCCCEEEECCCCCCCCEECCCCEEEEECCC
GRHGIAIMAQREGLAFESPIESDCAPLVEPVQDLLKAGIEIHCLRDITRGGLGAVLNELA
CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHCCCHHHHHHHHH
IAAGYQFKVHGNQIPVIEAVRGACEIFGFDPVHIANEGRFVAILPEARAAEGLALLQHYN
HHCCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHCC
ANARQIGLVTTQNCGEQHLAIAPVVVENDLGVTRILERLSGEQLPRIC
CCCEEEEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1526470 [H]