| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170076793
Identifier: 170076793
GI number: 170076793
Start: 167146
End: 167700
Strand: Direct
Name: 170076793
Synonym: SYNPCC7002_A0161
Alternate gene names: NA
Gene position: 167146-167700 (Clockwise)
Preceding gene: 170076792
Following gene: 170076797
Centisome position: 5.56
GC content: 56.76
Gene sequence:
>555_bases ATGGCGAAGTTGATGATGTTAGAGCCTTATCAACTATTGTTGGGCGGCGTAGTGGCGATCGCCTTTCTCACGGTGGGCCT GACGGTGGGGGTCAGCAATGCCCTGGGGCGCAATATTCTTAAACCCCGGCAGTTTACCTGTCAGCCCGTCATAGAACCCC AAACAGGAGACTTGATGTGGACGGTCTTTCATCAGGGCCAAGGGCAACCGCAACCTTGGCTGCAAATGGTGCCGGGCATG GAAGGGGATGTGTCCCCCAAAAGTCGTTGTGAGCAGGTCGCCCAGCGCCTAGATTCCCTAGTGCCACAGCAACTCCGCGC CCTCACCTATCAGCCCAACCCAGCCACCCCAGAACGGGAAGCAATTTGTGCTCTGACTCAAACGAAAGGCGGCCCTTGTA CGACGCTCCTAATTTTGAAGCCAGAGACAGACCCAACGCAGTTTTTTGCGGATCTGACCCTGCCCCTACGCCGATGGGGA GAGGGGATGCAATTAGAAACCGCAAACCAGGTTCCCCTCGATCTGCAGCCTTTGCTGGAGCCAGCTTCTCCCTAG
Upstream 100 bases:
>100_bases AGACGAAATAGGCAAAATTCTGGAAATTTAGGGTCTAATCGGGAAACTTTTTTGGGGTCATCCCCGACAGATAATCATGG TGAAGTATTAGGGAAATACA
Downstream 100 bases:
>100_bases AGTTCTGGGCGGCTTAAATGTGGCCTAAATTTCACCTGGGCGATCGCCAAGACAAATCCCTAAGCCCCGCGCGGTTTTCA CCAAAGTTCCCTCCGGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MAKLMMLEPYQLLLGGVVAIAFLTVGLTVGVSNALGRNILKPRQFTCQPVIEPQTGDLMWTVFHQGQGQPQPWLQMVPGM EGDVSPKSRCEQVAQRLDSLVPQQLRALTYQPNPATPEREAICALTQTKGGPCTTLLILKPETDPTQFFADLTLPLRRWG EGMQLETANQVPLDLQPLLEPASP
Sequences:
>Translated_184_residues MAKLMMLEPYQLLLGGVVAIAFLTVGLTVGVSNALGRNILKPRQFTCQPVIEPQTGDLMWTVFHQGQGQPQPWLQMVPGM EGDVSPKSRCEQVAQRLDSLVPQQLRALTYQPNPATPEREAICALTQTKGGPCTTLLILKPETDPTQFFADLTLPLRRWG EGMQLETANQVPLDLQPLLEPASP >Mature_183_residues AKLMMLEPYQLLLGGVVAIAFLTVGLTVGVSNALGRNILKPRQFTCQPVIEPQTGDLMWTVFHQGQGQPQPWLQMVPGME GDVSPKSRCEQVAQRLDSLVPQQLRALTYQPNPATPEREAICALTQTKGGPCTTLLILKPETDPTQFFADLTLPLRRWGE GMQLETANQVPLDLQPLLEPASP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20227; Mature: 20096
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLMMLEPYQLLLGGVVAIAFLTVGLTVGVSNALGRNILKPRQFTCQPVIEPQTGDLMW CCCEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEE TVFHQGQGQPQPWLQMVPGMEGDVSPKSRCEQVAQRLDSLVPQQLRALTYQPNPATPERE EEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH AICALTQTKGGPCTTLLILKPETDPTQFFADLTLPLRRWGEGMQLETANQVPLDLQPLLE HEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHCCC PASP CCCC >Mature Secondary Structure AKLMMLEPYQLLLGGVVAIAFLTVGLTVGVSNALGRNILKPRQFTCQPVIEPQTGDLMW CCEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCEEE TVFHQGQGQPQPWLQMVPGMEGDVSPKSRCEQVAQRLDSLVPQQLRALTYQPNPATPERE EEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH AICALTQTKGGPCTTLLILKPETDPTQFFADLTLPLRRWGEGMQLETANQVPLDLQPLLE HEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHCCC PASP CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA