Click here to switch to the map view.

The map label for this gene is patA [H]

Identifier: 170076680

GI number: 170076680

Start: 49554

End: 50762

Strand: Direct

Name: patA [H]

Synonym: SYNPCC7002_A0045

Alternate gene names: 170076680

Gene position: 49554-50762 (Clockwise)

Preceding gene: 170076678

Following gene: 170076681

Centisome position: 1.65

GC content: 49.46

Gene sequence:

>1209_bases
ATGACTGCTGCAGGCAATACACTCAGTTTCATCGCCGATCAACTAAACCAGTTGTGCCAAACCCGGGCTACGGGGGAGTT
GATTGTGGGGAATAGTCAATACCAGGGGCATATTCATCTCCTGTCCGGGCGTCTTCTCCATGCCACCGCCGGTATCCACT
CTACCCGTCGTTGGTACCGCATTACCCAACGGCTCGCCCCCCAGTGGACGCCAAATCCTCAAGAACTGACAAGTCCCCAA
ATGTGGGAATATCAGCTCCTTTACCAAGGGATCACAACCAAACAACTGACGGTCATGCAAGCGAAGGCAATTATTCGGGC
GATCGCCCAGGAAGTCTTCTTCGATCTTGGTTGCTATGCCGATGCCACCATCGAATCCCATGAAACCCAAAAAAATGCCA
CAGAAATCGCCCTCAGTTTGTCCTTGTCTTACCTAGAAGTCGAACCCGACCTCAAGCGAGTGATGCAACTCCAACAACAA
TGGCAAGCCGCTGGTCTTGGTAACTTGAGTCCCACCCTCGCCCCAGTGCTAAAGGCAGGTATTGATGCCAGTGCCCTTGG
CAGTTTGGGTCAGTATCTCAATGGACAATTCACCATGTGGGACATTTCTGTGTGCCTTGGTAAATCGGTTAATAGCGTTG
CCAATGCCCTAATTCCCCTATTAAAAAAGCGCATTGTTCAACTGAAAAAAATTGCCGATTTACCCCCTCCCCTAGGCCAT
CTTGCAGAATCTACCGATGCTGATAGCCCCACTTCCGGCAGTCTGAGATCGCCCGAAAAGCGTGATGCCCTCATTGCTTG
CATTGATGATAGCCCCGTGATTCTCCAAACCCTACGGAAAATCCTCGAAGGGGCTGGTTATCGCACCATCGGCATTAGTG
AACCCATGCGGGGCGTTGCCAAGCTTATCGAGAGTCAACCAGACGTGATCATTCTTGACCTCGTGATGCCCAATGCTAGT
GGTTATACCGTGTGTAAGTTTCTCAGGCAAACCTCTGTGTTTGAAAAAACGCCAATTATTGTCTTGACCAGCCGCGATAC
CTTGATTGATCGCAATCGAGCCAAGCTCGTGGGGGCTTCAGATTTTTTGGGGAAACCACCGGATCCAGAAAAAACCATTG
CCTTAATTGAAAAATATTTAGATGAAGTTGCCGCACAGGATAATGAAACAGAAGATGTCACCTTAAAAGTTTCTAGCTCT
ACCCGATAA

Upstream 100 bases:

>100_bases
TTTAAATTAATAAATTGATTTGTGTATTGTTGCAAAGTTTTTGTTAGGTGATCGTGATGTTATGGGTATATTAAAACCGA
GAATGCTCTAGACACAGAAT

Downstream 100 bases:

>100_bases
AATTTGACTTTTCAAAGTTTACTTAAGGGTTGCTCTCAAACAAGAATTGTTATTTAATTTGAATTTTCCCCAGAGGTTTG
TAATGGCAACTTTATTATTA

Product: two component response regulator

Products: NA

Alternate protein names: PAT-1 [H]

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MTAAGNTLSFIADQLNQLCQTRATGELIVGNSQYQGHIHLLSGRLLHATAGIHSTRRWYRITQRLAPQWTPNPQELTSPQ
MWEYQLLYQGITTKQLTVMQAKAIIRAIAQEVFFDLGCYADATIESHETQKNATEIALSLSLSYLEVEPDLKRVMQLQQQ
WQAAGLGNLSPTLAPVLKAGIDASALGSLGQYLNGQFTMWDISVCLGKSVNSVANALIPLLKKRIVQLKKIADLPPPLGH
LAESTDADSPTSGSLRSPEKRDALIACIDDSPVILQTLRKILEGAGYRTIGISEPMRGVAKLIESQPDVIILDLVMPNAS
GYTVCKFLRQTSVFEKTPIIVLTSRDTLIDRNRAKLVGASDFLGKPPDPEKTIALIEKYLDEVAAQDNETEDVTLKVSSS
TR

Sequences:

>Translated_402_residues
MTAAGNTLSFIADQLNQLCQTRATGELIVGNSQYQGHIHLLSGRLLHATAGIHSTRRWYRITQRLAPQWTPNPQELTSPQ
MWEYQLLYQGITTKQLTVMQAKAIIRAIAQEVFFDLGCYADATIESHETQKNATEIALSLSLSYLEVEPDLKRVMQLQQQ
WQAAGLGNLSPTLAPVLKAGIDASALGSLGQYLNGQFTMWDISVCLGKSVNSVANALIPLLKKRIVQLKKIADLPPPLGH
LAESTDADSPTSGSLRSPEKRDALIACIDDSPVILQTLRKILEGAGYRTIGISEPMRGVAKLIESQPDVIILDLVMPNAS
GYTVCKFLRQTSVFEKTPIIVLTSRDTLIDRNRAKLVGASDFLGKPPDPEKTIALIEKYLDEVAAQDNETEDVTLKVSSS
TR
>Mature_401_residues
TAAGNTLSFIADQLNQLCQTRATGELIVGNSQYQGHIHLLSGRLLHATAGIHSTRRWYRITQRLAPQWTPNPQELTSPQM
WEYQLLYQGITTKQLTVMQAKAIIRAIAQEVFFDLGCYADATIESHETQKNATEIALSLSLSYLEVEPDLKRVMQLQQQW
QAAGLGNLSPTLAPVLKAGIDASALGSLGQYLNGQFTMWDISVCLGKSVNSVANALIPLLKKRIVQLKKIADLPPPLGHL
AESTDADSPTSGSLRSPEKRDALIACIDDSPVILQTLRKILEGAGYRTIGISEPMRGVAKLIESQPDVIILDLVMPNASG
YTVCKFLRQTSVFEKTPIIVLTSRDTLIDRNRAKLVGASDFLGKPPDPEKTIALIEKYLDEVAAQDNETEDVTLKVSSST
R

Specific function: Controls heterocyst pattern formation. Required for the differentiation of intercalary heterocysts but not for terminal heterocysts [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=120, Percent_Identity=29.1666666666667, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1788394, Length=122, Percent_Identity=30.327868852459, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786911, Length=102, Percent_Identity=36.2745098039216, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 44088; Mature: 43957

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAGNTLSFIADQLNQLCQTRATGELIVGNSQYQGHIHLLSGRLLHATAGIHSTRRWYR
CCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCEEEHHHCHHHHHHHHH
ITQRLAPQWTPNPQELTSPQMWEYQLLYQGITTKQLTVMQAKAIIRAIAQEVFFDLGCYA
HHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DATIESHETQKNATEIALSLSLSYLEVEPDLKRVMQLQQQWQAAGLGNLSPTLAPVLKAG
CCCCCHHHHHHHHHHEEEEEEEEEEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC
IDASALGSLGQYLNGQFTMWDISVCLGKSVNSVANALIPLLKKRIVQLKKIADLPPPLGH
CCHHHHHHHHHHHCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LAESTDADSPTSGSLRSPEKRDALIACIDDSPVILQTLRKILEGAGYRTIGISEPMRGVA
HHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEECCCHHHHHHH
KLIESQPDVIILDLVMPNASGYTVCKFLRQTSVFEKTPIIVLTSRDTLIDRNRAKLVGAS
HHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCHHEEECH
DFLGKPPDPEKTIALIEKYLDEVAAQDNETEDVTLKVSSSTR
HHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
>Mature Secondary Structure 
TAAGNTLSFIADQLNQLCQTRATGELIVGNSQYQGHIHLLSGRLLHATAGIHSTRRWYR
CCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEECCCEEEHHHCHHHHHHHHH
ITQRLAPQWTPNPQELTSPQMWEYQLLYQGITTKQLTVMQAKAIIRAIAQEVFFDLGCYA
HHHHHCCCCCCCHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DATIESHETQKNATEIALSLSLSYLEVEPDLKRVMQLQQQWQAAGLGNLSPTLAPVLKAG
CCCCCHHHHHHHHHHEEEEEEEEEEEECHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC
IDASALGSLGQYLNGQFTMWDISVCLGKSVNSVANALIPLLKKRIVQLKKIADLPPPLGH
CCHHHHHHHHHHHCCCEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LAESTDADSPTSGSLRSPEKRDALIACIDDSPVILQTLRKILEGAGYRTIGISEPMRGVA
HHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEECCCHHHHHHH
KLIESQPDVIILDLVMPNASGYTVCKFLRQTSVFEKTPIIVLTSRDTLIDRNRAKLVGAS
HHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHCCCCHHEEECH
DFLGKPPDPEKTIALIEKYLDEVAAQDNETEDVTLKVSSSTR
HHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1608976; 11237320; 11759840 [H]