| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170076659
Identifier: 170076659
GI number: 170076659
Start: 20085
End: 20954
Strand: Direct
Name: 170076659
Synonym: SYNPCC7002_A0023
Alternate gene names: NA
Gene position: 20085-20954 (Clockwise)
Preceding gene: 170076656
Following gene: 170076660
Centisome position: 0.67
GC content: 55.98
Gene sequence:
>870_bases GTGTCGGTTTTAACGTCACCTATGACAGAAATCACCATGGCAACACGGGAGCAGCTCCGGGAACAACGGAAGCAAAAACA ACGACAGCGTACCCTCCGCTGGTTCCAGGGTCTATGGCGATCGCTGGCCCTGATAGGGTTGGCCTATGGGGCATTCTGGG TCTTAGACCGACCCGATTGGATTATCAAAAGTGCCGCTCAAATCACCATTGAAGGTAATCAAGTCCTGCCCACAGAGCGG ATTCGTCCCCTGATCCCCCTCACCTATCCCCAACCAATCCTAACCCTCAAACCCCAGGAACTAGAGCAAGCCATTGAAGC CCAAGGGGCGATCGCCGAAGCCCTGGTTTCCCGTCGTCTGGTGCCCCCCAGCCTGGCGATCCAAGTCCAAGAACGCTTCC CCGTCGCCCGCTCCCAAACGCCCATCTCTAGCCAAGGCGATCGCCCCCTTGAACCGGGATACCTAGATGCCGAAGGGCAA TGGTTCCCCGCCGCAGTCTACGAACCCCTCAGTGAATATCAGCCCTTACCGACCCTAGAAGTGACCGGAATTCGGGAGCT GCAACTGCCCCTCTGGCCCGAACTCTATCGCACCCTAGGGCGATCGCCCGTTGAAATTTTGAGCATCAACTGGCAAGACT CCAACAATTTGATTTTGAACACCGAACTTGGTAGTTTTCACCTGGGGCCAGATCTGACGCAACTCGAGGCCCAATTAGCG GCGATCGCCAAGCTCCAACAAACCCTCGGCACAACCATTCCCGCCCAGGATATCCAATACATTGATCTGCAAAATCCTGA CGAGCCTATTATCCAGAGCAACAAACCCATCGTTCCCCCAGCCTCCCAGCCCGAAACCCCCCAAACCTAA
Upstream 100 bases:
>100_bases GGCGGGACGTGGGAAATGGCGGGCCAGGGCGATTGATCATGGCAAATCCAAGGGTAATTTCCAGGAAAGAGAACTAACTT CAGTAAGATAGTCATACATT
Downstream 100 bases:
>100_bases AAAAATGATGCCCCTGTAACAGCAACATCTCCCAAAATCTGGCAGTCTAAAAAAGCTTGAAGGTCTTATGATCTAAGAAA TTTCTCCCAAAAGATACTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Polypeptide-Transport-Associated Domain Protein FtsQ-Type; POTRA Domain FtsQ-Type Family; Septal Protein; Polypeptide-Transport-Associated Domain-Containing Protein
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSVLTSPMTEITMATREQLREQRKQKQRQRTLRWFQGLWRSLALIGLAYGAFWVLDRPDWIIKSAAQITIEGNQVLPTER IRPLIPLTYPQPILTLKPQELEQAIEAQGAIAEALVSRRLVPPSLAIQVQERFPVARSQTPISSQGDRPLEPGYLDAEGQ WFPAAVYEPLSEYQPLPTLEVTGIRELQLPLWPELYRTLGRSPVEILSINWQDSNNLILNTELGSFHLGPDLTQLEAQLA AIAKLQQTLGTTIPAQDIQYIDLQNPDEPIIQSNKPIVPPASQPETPQT
Sequences:
>Translated_289_residues MSVLTSPMTEITMATREQLREQRKQKQRQRTLRWFQGLWRSLALIGLAYGAFWVLDRPDWIIKSAAQITIEGNQVLPTER IRPLIPLTYPQPILTLKPQELEQAIEAQGAIAEALVSRRLVPPSLAIQVQERFPVARSQTPISSQGDRPLEPGYLDAEGQ WFPAAVYEPLSEYQPLPTLEVTGIRELQLPLWPELYRTLGRSPVEILSINWQDSNNLILNTELGSFHLGPDLTQLEAQLA AIAKLQQTLGTTIPAQDIQYIDLQNPDEPIIQSNKPIVPPASQPETPQT >Mature_288_residues SVLTSPMTEITMATREQLREQRKQKQRQRTLRWFQGLWRSLALIGLAYGAFWVLDRPDWIIKSAAQITIEGNQVLPTERI RPLIPLTYPQPILTLKPQELEQAIEAQGAIAEALVSRRLVPPSLAIQVQERFPVARSQTPISSQGDRPLEPGYLDAEGQW FPAAVYEPLSEYQPLPTLEVTGIRELQLPLWPELYRTLGRSPVEILSINWQDSNNLILNTELGSFHLGPDLTQLEAQLAA IAKLQQTLGTTIPAQDIQYIDLQNPDEPIIQSNKPIVPPASQPETPQT
Specific function: Unknown
COG id: COG1589
COG function: function code M; Cell division septal protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32571; Mature: 32440
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLTSPMTEITMATREQLREQRKQKQRQRTLRWFQGLWRSLALIGLAYGAFWVLDRPDW CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCH IIKSAAQITIEGNQVLPTERIRPLIPLTYPQPILTLKPQELEQAIEAQGAIAEALVSRRL HHCCCEEEEEECCEECCHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCC VPPSLAIQVQERFPVARSQTPISSQGDRPLEPGYLDAEGQWFPAAVYEPLSEYQPLPTLE CCCHHEEEEHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCEECHHHHHHHHHCCCCCCEE VTGIRELQLPLWPELYRTLGRSPVEILSINWQDSNNLILNTELGSFHLGPDLTQLEAQLA ECCCEEECCCCCHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCEECCCCHHHHHHHHH AIAKLQQTLGTTIPAQDIQYIDLQNPDEPIIQSNKPIVPPASQPETPQT HHHHHHHHHCCCCCCCCCEEEECCCCCCCHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVLTSPMTEITMATREQLREQRKQKQRQRTLRWFQGLWRSLALIGLAYGAFWVLDRPDW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCH IIKSAAQITIEGNQVLPTERIRPLIPLTYPQPILTLKPQELEQAIEAQGAIAEALVSRRL HHCCCEEEEEECCEECCHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCC VPPSLAIQVQERFPVARSQTPISSQGDRPLEPGYLDAEGQWFPAAVYEPLSEYQPLPTLE CCCHHEEEEHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCEECHHHHHHHHHCCCCCCEE VTGIRELQLPLWPELYRTLGRSPVEILSINWQDSNNLILNTELGSFHLGPDLTQLEAQLA ECCCEEECCCCCHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCEECCCCHHHHHHHHH AIAKLQQTLGTTIPAQDIQYIDLQNPDEPIIQSNKPIVPPASQPETPQT HHHHHHHHHCCCCCCCCCEEEECCCCCCCHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA