| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170025979
Identifier: 170025979
GI number: 170025979
Start: 4151159
End: 4151296
Strand: Reverse
Name: 170025979
Synonym: YPK_3764
Alternate gene names: NA
Gene position: 4151296-4151159 (Counterclockwise)
Preceding gene: 170025980
Following gene: 170025976
Centisome position: 88.52
GC content: 40.58
Gene sequence:
>138_bases ATGGATGTATTTACGGCGTCTTTACGATCTGCCTGTTCTCTCCGTCGCGGGCACTTTGTCAATAACCTCATTGGCGGTTA TTATTTACACTTAATCTTATTTGTAAATATTAGCGGTGGCATGCCAATTATTCTCTGA
Upstream 100 bases:
>100_bases ATTGCAGACTGCTGACAAACCCCGATGACGCGATCTTGAACGGTGAGGATAGGCAGAGGAGTAAAGCGTCCGCGCCAAGG ATGGCGCGGCTCGAGCCTAC
Downstream 100 bases:
>100_bases ACGCACTTCAATCACTTTATACGCTTTCGCACCCACGGTATCTGCTTTATCAGATAAGGCCTGGCGGATGTCAGATGGTG CGCCATTAAGGCCACTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 45
Protein sequence:
>45_residues MDVFTASLRSACSLRRGHFVNNLIGGYYLHLILFVNISGGMPIIL
Sequences:
>Translated_45_residues MDVFTASLRSACSLRRGHFVNNLIGGYYLHLILFVNISGGMPIIL >Mature_45_residues MDVFTASLRSACSLRRGHFVNNLIGGYYLHLILFVNISGGMPIIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4981; Mature: 4981
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVFTASLRSACSLRRGHFVNNLIGGYYLHLILFVNISGGMPIIL CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCEEEC >Mature Secondary Structure MDVFTASLRSACSLRRGHFVNNLIGGYYLHLILFVNISGGMPIIL CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA