| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170025966
Identifier: 170025966
GI number: 170025966
Start: 4140653
End: 4141663
Strand: Reverse
Name: 170025966
Synonym: YPK_3751
Alternate gene names: NA
Gene position: 4141663-4140653 (Counterclockwise)
Preceding gene: 170025967
Following gene: 170025965
Centisome position: 88.32
GC content: 49.36
Gene sequence:
>1011_bases ATGAAACTTCAAGAAACTGGCAATAGCCGGGGCGGATACCCCTACGCCCAAAACATGGCGAACGGTATTAACGAAATTCG TCGTAACGTTATTTGTGGTGACTGGTCAGCCGTTAATAATCGTGTTTGCACATTAACGGATTTAGGCTTGCGTCATAACG GTCAGGGGCTTGTATGGCTGCGTTCTGGTGTGCCAGTCCGTGAGGCGGATAGCGATACTGGGTTCAGTGGTAAAGCGAAG GTATCCCATGAGTACCATGAGTCGCTATGTCCATCACGTCCAGCAGATAACAAGGGTTTCATCCGTGGCGTTCACTCTCA TAAAGTTGATGGTTATTGCCTGAATATCCTCACCAGCAGCCCGTCATGGATTGAGTACTGGCATCGGCGGGATGGTAAGG CTCTTTCTACTTTCGCCGTTCAGGTGCTCACTAATGAGCGTCAGGAAGCCTTTGACGATTGGGTCATTTATCGCAGCCCG GCGCAGCCAGATAAATACACAGTGATTAATACGGTGCGTAATAGCTCGACGGTGAAGGAATATCAGCGTTTGGGCTGGGT ATGTGAATCAGCGCATGAGCTATCGTTGCTGGTTAAGAACGATGCTGAGTTTAGCCGTCTGATGGGCCGGTTGGGTTACG TGAAAATCCGAACCCGCAAAATTACCGGACGAAAGGAGGCTTTCTGGATTTATCGTTCAGCAGAAAAAGGATTATCGGCG GCAGAGAAGCAACCCCTAATGGATGCAAGTTATTCTGATGTAGTTAAGCGTATTTCTCGCGGTAAACAAGAGGTATGCCC GGAAGGAGCCGCACCACACAAGGCCTCAGAGCCATTTGTGCAGGTGTCACACAAGCCTCGATATGGTTATAACGAGGTCG CTTTAGATGGGAAATTACTTCATGTGTATGGCGACCACATCCGTTTACTGACTAAAAAGCGGGTTCGTGTGAATGGTAAG CAGGTTCAGGGCTACACAGCTAAAGGTCTGCGTGTGGAGGTGGTGGGATGA
Upstream 100 bases:
>100_bases GGCTACTCAGTGACTTACTTTGCTGGGTTCGTAACCCTCCAGCGGTAAATAACGTTAATACTCCATGTGGTCGCAAGTCT GCTTAATTAAGGCCTGAAAT
Downstream 100 bases:
>100_bases TACTCACAACTCCAGTGGACAGCCAGAAACAAGCCTTTCCCCTGGCTGGCAGTATCCAAACTCAGCCTGAATCCAGCCAG AGTGATATTTCCAGCAGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKLQETGNSRGGYPYAQNMANGINEIRRNVICGDWSAVNNRVCTLTDLGLRHNGQGLVWLRSGVPVREADSDTGFSGKAK VSHEYHESLCPSRPADNKGFIRGVHSHKVDGYCLNILTSSPSWIEYWHRRDGKALSTFAVQVLTNERQEAFDDWVIYRSP AQPDKYTVINTVRNSSTVKEYQRLGWVCESAHELSLLVKNDAEFSRLMGRLGYVKIRTRKITGRKEAFWIYRSAEKGLSA AEKQPLMDASYSDVVKRISRGKQEVCPEGAAPHKASEPFVQVSHKPRYGYNEVALDGKLLHVYGDHIRLLTKKRVRVNGK QVQGYTAKGLRVEVVG
Sequences:
>Translated_336_residues MKLQETGNSRGGYPYAQNMANGINEIRRNVICGDWSAVNNRVCTLTDLGLRHNGQGLVWLRSGVPVREADSDTGFSGKAK VSHEYHESLCPSRPADNKGFIRGVHSHKVDGYCLNILTSSPSWIEYWHRRDGKALSTFAVQVLTNERQEAFDDWVIYRSP AQPDKYTVINTVRNSSTVKEYQRLGWVCESAHELSLLVKNDAEFSRLMGRLGYVKIRTRKITGRKEAFWIYRSAEKGLSA AEKQPLMDASYSDVVKRISRGKQEVCPEGAAPHKASEPFVQVSHKPRYGYNEVALDGKLLHVYGDHIRLLTKKRVRVNGK QVQGYTAKGLRVEVVG >Mature_336_residues MKLQETGNSRGGYPYAQNMANGINEIRRNVICGDWSAVNNRVCTLTDLGLRHNGQGLVWLRSGVPVREADSDTGFSGKAK VSHEYHESLCPSRPADNKGFIRGVHSHKVDGYCLNILTSSPSWIEYWHRRDGKALSTFAVQVLTNERQEAFDDWVIYRSP AQPDKYTVINTVRNSSTVKEYQRLGWVCESAHELSLLVKNDAEFSRLMGRLGYVKIRTRKITGRKEAFWIYRSAEKGLSA AEKQPLMDASYSDVVKRISRGKQEVCPEGAAPHKASEPFVQVSHKPRYGYNEVALDGKLLHVYGDHIRLLTKKRVRVNGK QVQGYTAKGLRVEVVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37881; Mature: 37881
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQETGNSRGGYPYAQNMANGINEIRRNVICGDWSAVNNRVCTLTDLGLRHNGQGLVWL CCCCCCCCCCCCCCHHHHHHHHHHHHHHCEECCCHHHHCCCEEEEEECCCEECCCEEEEE RSGVPVREADSDTGFSGKAKVSHEYHESLCPSRPADNKGFIRGVHSHKVDGYCLNILTSS ECCCCCCCCCCCCCCCCCEECCHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEEECC PSWIEYWHRRDGKALSTFAVQVLTNERQEAFDDWVIYRSPAQPDKYTVINTVRNSSTVKE CHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCEEEECCCCCCCCEEEEEECCCCHHHHH YQRLGWVCESAHELSLLVKNDAEFSRLMGRLGYVKIRTRKITGRKEAFWIYRSAEKGLSA HHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCEEEEEEEEECCCCEEEEEEECHHHCCHH AEKQPLMDASYSDVVKRISRGKQEVCPEGAAPHKASEPFVQVSHKPRYGYNEVALDGKLL HHCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCEEE HVYGDHIRLLTKKRVRVNGKQVQGYTAKGLRVEVVG EEECCHHEEEEHHHHEECCEEECCEEECCEEEEEEC >Mature Secondary Structure MKLQETGNSRGGYPYAQNMANGINEIRRNVICGDWSAVNNRVCTLTDLGLRHNGQGLVWL CCCCCCCCCCCCCCHHHHHHHHHHHHHHCEECCCHHHHCCCEEEEEECCCEECCCEEEEE RSGVPVREADSDTGFSGKAKVSHEYHESLCPSRPADNKGFIRGVHSHKVDGYCLNILTSS ECCCCCCCCCCCCCCCCCEECCHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEEECC PSWIEYWHRRDGKALSTFAVQVLTNERQEAFDDWVIYRSPAQPDKYTVINTVRNSSTVKE CHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCEEEECCCCCCCCEEEEEECCCCHHHHH YQRLGWVCESAHELSLLVKNDAEFSRLMGRLGYVKIRTRKITGRKEAFWIYRSAEKGLSA HHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCEEEEEEEEECCCCEEEEEEECHHHCCHH AEKQPLMDASYSDVVKRISRGKQEVCPEGAAPHKASEPFVQVSHKPRYGYNEVALDGKLL HHCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCEEE HVYGDHIRLLTKKRVRVNGKQVQGYTAKGLRVEVVG EEECCHHEEEEHHHHEECCEEECCEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA