| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170025937
Identifier: 170025937
GI number: 170025937
Start: 4112128
End: 4112439
Strand: Reverse
Name: 170025937
Synonym: YPK_3722
Alternate gene names: NA
Gene position: 4112439-4112128 (Counterclockwise)
Preceding gene: 170025938
Following gene: 170025936
Centisome position: 87.7
GC content: 45.51
Gene sequence:
>312_bases ATGAAAAGTGATCTGACACTGCACGCTTGGGATGAGGTTCGGGCAGAACTCTTACAAGATGAAGAAACCGCAAGGGCCTA TGCTATCGTCATGCTACGTAAGGCACTACTCAATAGTCTGGTTGCGGTCAGAAAATCCAAACAGTTGACGCAGGTTGATA TCGCTAAACGCATCGGTGTGAGTCGGCAGGCGATCAGCAAATTCGAGAAAGGTGAGTCAGCCCCGACTCTTGATACTCTG ATTGGTTATACGGCGGCCATGGATATTGATTTTGCTGCCAATATGAAGAAAATATTTACTCAAACATTTTGA
Upstream 100 bases:
>100_bases ATAAGGCACCTGATTCCAGCAAAGCACTCGGATTACGTAGGTATAAAGATTTCCTCCGTTCTCAGGGTGAGGAATAAATT AGCAACAAAAAGAGGTTGTT
Downstream 100 bases:
>100_bases TGATTAAACGTAAAAACCAGCCTTCGGGCTGGTTCAGACTGCTGACAAACCCCGATGACGCGATCTTGAACGGTGAGGAT AGGCAGAGGAGTAAAGCGTC
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Addiction System Transcriptional Regulator
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MKSDLTLHAWDEVRAELLQDEETARAYAIVMLRKALLNSLVAVRKSKQLTQVDIAKRIGVSRQAISKFEKGESAPTLDTL IGYTAAMDIDFAANMKKIFTQTF
Sequences:
>Translated_103_residues MKSDLTLHAWDEVRAELLQDEETARAYAIVMLRKALLNSLVAVRKSKQLTQVDIAKRIGVSRQAISKFEKGESAPTLDTL IGYTAAMDIDFAANMKKIFTQTF >Mature_103_residues MKSDLTLHAWDEVRAELLQDEETARAYAIVMLRKALLNSLVAVRKSKQLTQVDIAKRIGVSRQAISKFEKGESAPTLDTL IGYTAAMDIDFAANMKKIFTQTF
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11548; Mature: 11548
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSDLTLHAWDEVRAELLQDEETARAYAIVMLRKALLNSLVAVRKSKQLTQVDIAKRIGV CCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC SRQAISKFEKGESAPTLDTLIGYTAAMDIDFAANMKKIFTQTF CHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MKSDLTLHAWDEVRAELLQDEETARAYAIVMLRKALLNSLVAVRKSKQLTQVDIAKRIGV CCCCCEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC SRQAISKFEKGESAPTLDTLIGYTAAMDIDFAANMKKIFTQTF CHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA