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The map label for this gene is yurM [H]

Identifier: 170025922

GI number: 170025922

Start: 4093674

End: 4094513

Strand: Reverse

Name: yurM [H]

Synonym: YPK_3707

Alternate gene names: 170025922

Gene position: 4094513-4093674 (Counterclockwise)

Preceding gene: 170025923

Following gene: 170025921

Centisome position: 87.31

GC content: 50.36

Gene sequence:

>840_bases
ATGAAAAGTAAAAGCTGGAACAGTATCGGCCGTTGGATAATTTATGGTCTGCTGCTGATTGTGTTTGTTGGCCCGTACTG
GGGAATTATTGCCACGGCATTCAGTGGTGCACCGGTGAAACCCGGTGAATTGCTGGCATGGCCCAATCAGTTCTCATGGG
ATAACTTTATCTTCGCCTGGATGGATATCGGCGTCTGGCAATACTTACTGAACTCGATCATTGTGGTGTTCTTTGGCACG
GTGTTGCAGGTGTCAGTCAGTGCGCTGGCGGCTTATGCGTTGGCCCGTAAAAAGTTTGTCGGGGTCTCCTTGACCAGTCT
GATCATCCTGTCGACCATGATGCTGCCGGAAGAAGTGATCGCCATTCCTTTGTATATGATCATCAACTGGCAACTGCCGG
TGATCGATGCCTCGCTGTACAACAGCTATCTGGGCATGATCCTACCGATTGTGGGCTGGGCCTTCTCTATCTTTGTATTG
ACCGAATTTATGGCGGCAATTCCAAAAGAGCTGGAAGAGGCGGCGCGCATTGACGGTGCCAGCGAATGGCAAATCTTCTT
CCACGTGATCTTGCCGTTGGTTAAACCTGCATTGGGTACTGTGGTGACCTTCGGCTTTATCATGATTTGGGATCAATACC
TGTTGCCACTGATTGTGGTGAATCAGGACAGTCTGAACACCATTCCGGTGATCCTCGGCACACTCCGTACCGATGAGAGC
ATCACCCCGAACATCTTTATTGCCATCACGCTGTTGGCGATGTTGCCGAGCATCATCGTGTATCTGGGTCTGCAAAAACA
TTTCAATCGCGGGATCATGTCTGGCGCGGTTAAAGGCTAG

Upstream 100 bases:

>100_bases
GGTGTCCTTCCTGCTATTTGCGTTCACTGTGATGCTGACGATGGGTCATCTCACCTTGAAAAAGCGGATCGCCCGTTACT
AACCGAGCCGGAGACTGGTA

Downstream 100 bases:

>100_bases
GGAGAAAGAAAATGGGATCGGTTGTACTTAAAAATGTGTGTAAATCTTACGGTGACATCCATGTGATCCGCGATGTATCG
CTGGAGATCCCTGATGGTGA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKSKSWNSIGRWIIYGLLLIVFVGPYWGIIATAFSGAPVKPGELLAWPNQFSWDNFIFAWMDIGVWQYLLNSIIVVFFGT
VLQVSVSALAAYALARKKFVGVSLTSLIILSTMMLPEEVIAIPLYMIINWQLPVIDASLYNSYLGMILPIVGWAFSIFVL
TEFMAAIPKELEEAARIDGASEWQIFFHVILPLVKPALGTVVTFGFIMIWDQYLLPLIVVNQDSLNTIPVILGTLRTDES
ITPNIFIAITLLAMLPSIIVYLGLQKHFNRGIMSGAVKG

Sequences:

>Translated_279_residues
MKSKSWNSIGRWIIYGLLLIVFVGPYWGIIATAFSGAPVKPGELLAWPNQFSWDNFIFAWMDIGVWQYLLNSIIVVFFGT
VLQVSVSALAAYALARKKFVGVSLTSLIILSTMMLPEEVIAIPLYMIINWQLPVIDASLYNSYLGMILPIVGWAFSIFVL
TEFMAAIPKELEEAARIDGASEWQIFFHVILPLVKPALGTVVTFGFIMIWDQYLLPLIVVNQDSLNTIPVILGTLRTDES
ITPNIFIAITLLAMLPSIIVYLGLQKHFNRGIMSGAVKG
>Mature_279_residues
MKSKSWNSIGRWIIYGLLLIVFVGPYWGIIATAFSGAPVKPGELLAWPNQFSWDNFIFAWMDIGVWQYLLNSIIVVFFGT
VLQVSVSALAAYALARKKFVGVSLTSLIILSTMMLPEEVIAIPLYMIINWQLPVIDASLYNSYLGMILPIVGWAFSIFVL
TEFMAAIPKELEEAARIDGASEWQIFFHVILPLVKPALGTVVTFGFIMIWDQYLLPLIVVNQDSLNTIPVILGTLRTDES
ITPNIFIAITLLAMLPSIIVYLGLQKHFNRGIMSGAVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=212, Percent_Identity=33.9622641509434, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1787571, Length=286, Percent_Identity=27.6223776223776, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1790464, Length=282, Percent_Identity=27.3049645390071, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31078; Mature: 31078

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKSWNSIGRWIIYGLLLIVFVGPYWGIIATAFSGAPVKPGELLAWPNQFSWDNFIFAW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHH
MDIGVWQYLLNSIIVVFFGTVLQVSVSALAAYALARKKFVGVSLTSLIILSTMMLPEEVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIPLYMIINWQLPVIDASLYNSYLGMILPIVGWAFSIFVLTEFMAAIPKELEEAARIDGA
HHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SEWQIFFHVILPLVKPALGTVVTFGFIMIWDQYLLPLIVVNQDSLNTIPVILGTLRTDES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCCCC
ITPNIFIAITLLAMLPSIIVYLGLQKHFNRGIMSGAVKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKSKSWNSIGRWIIYGLLLIVFVGPYWGIIATAFSGAPVKPGELLAWPNQFSWDNFIFAW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCHHHHHH
MDIGVWQYLLNSIIVVFFGTVLQVSVSALAAYALARKKFVGVSLTSLIILSTMMLPEEVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIPLYMIINWQLPVIDASLYNSYLGMILPIVGWAFSIFVLTEFMAAIPKELEEAARIDGA
HHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SEWQIFFHVILPLVKPALGTVVTFGFIMIWDQYLLPLIVVNQDSLNTIPVILGTLRTDES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHCCCCC
ITPNIFIAITLLAMLPSIIVYLGLQKHFNRGIMSGAVKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]