| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yjjZ [H]
Identifier: 170025852
GI number: 170025852
Start: 4014027
End: 4014365
Strand: Reverse
Name: yjjZ [H]
Synonym: YPK_3637
Alternate gene names: 170025852
Gene position: 4014365-4014027 (Counterclockwise)
Preceding gene: 170025854
Following gene: 170025850
Centisome position: 85.6
GC content: 49.56
Gene sequence:
>339_bases ATGATATTGGTTATGATTATCATTATCATTATCATTTGGGTGGGCATCATCATGATTACATCGACATTTGCAGCTTACCG TTCGTGGGGGATCACCGGGTTGCTCAGCCGTGGCATGTCCAGTGGCTGGGGAATATTGCTGCCTTTTACCTTGTTACCTG TACTGGGCTGGGTAGATATCTCTATCGGCCAATTGCGCATTCTTATTGTCGTGGCGATGCTGGCAACCGTCAGCATGTTG TACCACGTGCGGTTGCGGCACTTTTTGTTACTGCCATCTTGTCTGGCGCTGTTAGGCGGCTTGGTCGCGCTAATGCTAAT GCACGGTGGTGTGTCATGA
Upstream 100 bases:
>100_bases GTTTCAGCCTGTCATCATGATGTCGTTCAACGGCGCAAAATGATGCATATGACGCGAGCGTGTAGATAACGACATGGTGC AGAGTGCCAAAGAGTGATAT
Downstream 100 bases:
>100_bases TGGGGGTATCCGATCATCGGGGATAATATAAAACGTGAGGTAATACAGTAAGTAACAGCTTGGATGATTGACGTTGAAAT GGAATATATTGTGGGTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MILVMIIIIIIIWVGIIMITSTFAAYRSWGITGLLSRGMSSGWGILLPFTLLPVLGWVDISIGQLRILIVVAMLATVSML YHVRLRHFLLLPSCLALLGGLVALMLMHGGVS
Sequences:
>Translated_112_residues MILVMIIIIIIIWVGIIMITSTFAAYRSWGITGLLSRGMSSGWGILLPFTLLPVLGWVDISIGQLRILIVVAMLATVSML YHVRLRHFLLLPSCLALLGGLVALMLMHGGVS >Mature_112_residues MILVMIIIIIIIWVGIIMITSTFAAYRSWGITGLLSRGMSSGWGILLPFTLLPVLGWVDISIGQLRILIVVAMLATVSML YHVRLRHFLLLPSCLALLGGLVALMLMHGGVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082437, Length=75, Percent_Identity=49.3333333333333, Blast_Score=68, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009885 - ProDom: PD058594 [H]
Pfam domain/function: PF07256 DUF1435 [H]
EC number: NA
Molecular weight: Translated: 12216; Mature: 12216
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILVMIIIIIIIWVGIIMITSTFAAYRSWGITGLLSRGMSSGWGILLPFTLLPVLGWVDI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH SIGQLRILIVVAMLATVSMLYHVRLRHFLLLPSCLALLGGLVALMLMHGGVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MILVMIIIIIIIWVGIIMITSTFAAYRSWGITGLLSRGMSSGWGILLPFTLLPVLGWVDI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH SIGQLRILIVVAMLATVSMLYHVRLRHFLLLPSCLALLGGLVALMLMHGGVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]