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The map label for this gene is arpA [H]

Identifier: 170025623

GI number: 170025623

Start: 3739525

End: 3740712

Strand: Reverse

Name: arpA [H]

Synonym: YPK_3408

Alternate gene names: 170025623

Gene position: 3740712-3739525 (Counterclockwise)

Preceding gene: 170025624

Following gene: 170025622

Centisome position: 79.77

GC content: 39.9

Gene sequence:

>1188_bases
ATGCATATTGATCACTACAGCTTGCCCGTTTACGATAAAAATAATAGTGATAACACCCTGAAAGAAACCGAATTATTTAA
AGAAGTCCCTTATTTATCTGCTCGGTTAGGGGAGCAGGCTTATGAGTATAGTGGTGGTGACATCAGTAATTATCATTTAT
CTATTCAATATATTATGGACGTTCTGGCTGATCAGGCTAAGGGTAAAGTGGATTTAAGCCATTTTTCCAGTGAGGAAACG
CTCTCTTCTCATGTTTCTCTTGAGAAAAATGAGCATAACTATCATTGCTTTAATCAGCATGCCAGTACTGTTTATCATAT
TAATAATAATGATTTTGGCCGCACGCTGGTTGATCTTTTTGAGCAGATGAACAATTCGGGTGAAAACGTTCGAGCATTAA
AAATTGATAGTTCTCAACATTCAATGGCTGCGCGTCTTTATATTAAAGATACGGAGCAAGGGCAGCGTTTCGTTGTTAAT
TTTTATGACCCTAATATCACGGATAAAACTGTGCGTTGTGAGGTGGATGACGCATTAAAATTGAATGACTACTCATTAAG
AAATTTCATTAGTAATCAGACTTACTTATCCAGCTATGTTGATGCAGAGATATCATCAATTATTGTTTGTGATCAAGCCG
ATATCCATGATCAACATAAGGTGAAAGAGAACCGAGCGTTAACGCCATTATCACAGAGTTCACCTCTTCCTTTATCGGTA
GCACGATTGGATCTGTTGTTAACAGATAATTTTGCTGCAGGCATACAAACAATGGCAGAAGAAGTTAAGAATCTATCAGA
GTCCGAGCGTAACACATTCTTTAATCAGCTATTACAACCGAGGGCGGAGAATGACCTCTCTGGGCTGCAATGTGCTTTCA
ACTATCAGTGTTTTGATGCGTTGGAAGCCTACTCTGCATTGTTGGTGCTTGCACCACCAGAACAACGAACAGACTTATTA
ACAGGAAAAAGCGAAAATGGCTGGAGTAGTCTGGCTCAGGCCATGTCATCTGGGAATAGTGATATGGTGAGCGTATGCTT
CTATTTGTTGCAATGGCTCCCTTTGGACGATATGAATGCGTTTGTGTGGAAGTTGTTAGCATCCCTTCCTTTGGAAGATG
CGAATACACTTATGTGTCCGTTGGAAGAACCCCTTCCTTTGGACAATATGAGTACACGTGTGGAGTAA

Upstream 100 bases:

>100_bases
TAATGGCTTAATTTCATTATTTTACCTTATACCGCTTGGCGTAAATGAACGGCATGGTATGTAGATTGCTAACAAACAAG
ACTCTTCTATAAGGTAAAAT

Downstream 100 bases:

>100_bases
TACACTGATTTCATGCAACAGCAATCTAATTCATTGGTAAAAGACGCTGAAATATATGCACAACAATCAGCAGCCGTTAC
ACCAGCGTCTGCTTAAGTGG

Product: ShET2 enterotoxin domain-containing protein

Products: NA

Alternate protein names: Ankyrin-like regulatory protein [H]

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MHIDHYSLPVYDKNNSDNTLKETELFKEVPYLSARLGEQAYEYSGGDISNYHLSIQYIMDVLADQAKGKVDLSHFSSEET
LSSHVSLEKNEHNYHCFNQHASTVYHINNNDFGRTLVDLFEQMNNSGENVRALKIDSSQHSMAARLYIKDTEQGQRFVVN
FYDPNITDKTVRCEVDDALKLNDYSLRNFISNQTYLSSYVDAEISSIIVCDQADIHDQHKVKENRALTPLSQSSPLPLSV
ARLDLLLTDNFAAGIQTMAEEVKNLSESERNTFFNQLLQPRAENDLSGLQCAFNYQCFDALEAYSALLVLAPPEQRTDLL
TGKSENGWSSLAQAMSSGNSDMVSVCFYLLQWLPLDDMNAFVWKLLASLPLEDANTLMCPLEEPLPLDNMSTRVE

Sequences:

>Translated_395_residues
MHIDHYSLPVYDKNNSDNTLKETELFKEVPYLSARLGEQAYEYSGGDISNYHLSIQYIMDVLADQAKGKVDLSHFSSEET
LSSHVSLEKNEHNYHCFNQHASTVYHINNNDFGRTLVDLFEQMNNSGENVRALKIDSSQHSMAARLYIKDTEQGQRFVVN
FYDPNITDKTVRCEVDDALKLNDYSLRNFISNQTYLSSYVDAEISSIIVCDQADIHDQHKVKENRALTPLSQSSPLPLSV
ARLDLLLTDNFAAGIQTMAEEVKNLSESERNTFFNQLLQPRAENDLSGLQCAFNYQCFDALEAYSALLVLAPPEQRTDLL
TGKSENGWSSLAQAMSSGNSDMVSVCFYLLQWLPLDDMNAFVWKLLASLPLEDANTLMCPLEEPLPLDNMSTRVE
>Mature_395_residues
MHIDHYSLPVYDKNNSDNTLKETELFKEVPYLSARLGEQAYEYSGGDISNYHLSIQYIMDVLADQAKGKVDLSHFSSEET
LSSHVSLEKNEHNYHCFNQHASTVYHINNNDFGRTLVDLFEQMNNSGENVRALKIDSSQHSMAARLYIKDTEQGQRFVVN
FYDPNITDKTVRCEVDDALKLNDYSLRNFISNQTYLSSYVDAEISSIIVCDQADIHDQHKVKENRALTPLSQSSPLPLSV
ARLDLLLTDNFAAGIQTMAEEVKNLSESERNTFFNQLLQPRAENDLSGLQCAFNYQCFDALEAYSALLVLAPPEQRTDLL
TGKSENGWSSLAQAMSSGNSDMVSVCFYLLQWLPLDDMNAFVWKLLASLPLEDANTLMCPLEEPLPLDNMSTRVE

Specific function: Regulator Of Acs Synthesis. [C]

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 ANK repeats [H]

Homologues:

Organism=Escherichia coli, GI1790447, Length=341, Percent_Identity=24.9266862170088, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR012927 [H]

Pfam domain/function: PF07906 Toxin_15 [H]

EC number: NA

Molecular weight: Translated: 44704; Mature: 44704

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIDHYSLPVYDKNNSDNTLKETELFKEVPYLSARLGEQAYEYSGGDISNYHLSIQYIMD
CCCCCCCCCEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHH
VLADQAKGKVDLSHFSSEETLSSHVSLEKNEHNYHCFNQHASTVYHINNNDFGRTLVDLF
HHHHHCCCCEEHHHCCCHHHHHHHCEEECCCCCCEEECCCCCEEEEECCCCHHHHHHHHH
EQMNNSGENVRALKIDSSQHSMAARLYIKDTEQGQRFVVNFYDPNITDKTVRCEVDDALK
HHHCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCEE
LNDYSLRNFISNQTYLSSYVDAEISSIIVCDQADIHDQHKVKENRALTPLSQSSPLPLSV
CCCHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCEEH
ARLDLLLTDNFAAGIQTMAEEVKNLSESERNTFFNQLLQPRAENDLSGLQCAFNYQCFDA
HHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHH
LEAYSALLVLAPPEQRTDLLTGKSENGWSSLAQAMSSGNSDMVSVCFYLLQWLPLDDMNA
HHHHCEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHH
FVWKLLASLPLEDANTLMCPLEEPLPLDNMSTRVE
HHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHIDHYSLPVYDKNNSDNTLKETELFKEVPYLSARLGEQAYEYSGGDISNYHLSIQYIMD
CCCCCCCCCEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHH
VLADQAKGKVDLSHFSSEETLSSHVSLEKNEHNYHCFNQHASTVYHINNNDFGRTLVDLF
HHHHHCCCCEEHHHCCCHHHHHHHCEEECCCCCCEEECCCCCEEEEECCCCHHHHHHHHH
EQMNNSGENVRALKIDSSQHSMAARLYIKDTEQGQRFVVNFYDPNITDKTVRCEVDDALK
HHHCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCCEE
LNDYSLRNFISNQTYLSSYVDAEISSIIVCDQADIHDQHKVKENRALTPLSQSSPLPLSV
CCCHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCEEH
ARLDLLLTDNFAAGIQTMAEEVKNLSESERNTFFNQLLQPRAENDLSGLQCAFNYQCFDA
HHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHH
LEAYSALLVLAPPEQRTDLLTGKSENGWSSLAQAMSSGNSDMVSVCFYLLQWLPLDDMNA
HHHHCEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHH
FVWKLLASLPLEDANTLMCPLEEPLPLDNMSTRVE
HHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503; 1995429; 8014990 [H]