| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170025563
Identifier: 170025563
GI number: 170025563
Start: 3668009
End: 3668551
Strand: Direct
Name: 170025563
Synonym: YPK_3346
Alternate gene names: NA
Gene position: 3668009-3668551 (Clockwise)
Preceding gene: 170025562
Following gene: 170025567
Centisome position: 78.22
GC content: 49.91
Gene sequence:
>543_bases ATGGGGCTATTTTACAACGCGCAATTTCTGTGTTTCGCGCACAGCAAAACCCCACGCTTTGGGCATGGGGTTATCAATAC AACGTGTAATTTCTGTGTTTCGCACACAGCAAAAAAAACCCACGTTTTTGGCATGGGGTCATCATTACAACGCACAATTT CTGTGTTTCGCGCACAGCAAAAAACCCACGCTTTGGGCATGGGGTTATCAATACAACGTGTAATTTCTGTGTTTCGCGCA CAGCAAAAACCCCACGCTTTTGGCATGGGGTCATCATTACAACGCGTAATTTCTGTGTTTCGCGCACAGCAAAAACCCCA CGCTTTGGGCATGGGGTCTTGGCTTTATTTGATGCCTGGCAGTGTCCTACTCTCGCATGGGGAGACCCCACACTACCATC GGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGATCAGGTGGGACCACCGCGCTATGGCCGCCAGGCAAATTCTGTT TCAATTAACCCGCAAACAAGCAACACTTGTCAGCCAGTCAACACAATCTCGGAACGACGCTGA
Upstream 100 bases:
>100_bases CGTATGGAAATCCCAACAGATTGAATATCAAGAAAATGTATCACTGCCCCAAACTTAATCCCCAATAATATTCCCCCTTC AATCAACACCATCACCCAGC
Downstream 100 bases:
>100_bases AAATCTCTCTCAATTCAAAACACCTTCGGTGTTGTAAGGTTAAGCCTCACGGATCATTAGTACTGGTTAGCTCAATACAT CGCTGCACTTACACACCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MGLFYNAQFLCFAHSKTPRFGHGVINTTCNFCVSHTAKKTHVFGMGSSLQRTISVFRAQQKTHALGMGLSIQRVISVFRA QQKPHAFGMGSSLQRVISVFRAQQKPHALGMGSWLYLMPGSVLLSHGETPHYHRRYGVSLLSSAWDQVGPPRYGRQANSV SINPQTSNTCQPVNTISERR
Sequences:
>Translated_180_residues MGLFYNAQFLCFAHSKTPRFGHGVINTTCNFCVSHTAKKTHVFGMGSSLQRTISVFRAQQKTHALGMGLSIQRVISVFRA QQKPHAFGMGSSLQRVISVFRAQQKPHALGMGSWLYLMPGSVLLSHGETPHYHRRYGVSLLSSAWDQVGPPRYGRQANSV SINPQTSNTCQPVNTISERR >Mature_179_residues GLFYNAQFLCFAHSKTPRFGHGVINTTCNFCVSHTAKKTHVFGMGSSLQRTISVFRAQQKTHALGMGLSIQRVISVFRAQ QKPHAFGMGSSLQRVISVFRAQQKPHALGMGSWLYLMPGSVLLSHGETPHYHRRYGVSLLSSAWDQVGPPRYGRQANSVS INPQTSNTCQPVNTISERR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19989; Mature: 19858
Theoretical pI: Translated: 11.50; Mature: 11.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFYNAQFLCFAHSKTPRFGHGVINTTCNFCVSHTAKKTHVFGMGSSLQRTISVFRAQQ CCEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH KTHALGMGLSIQRVISVFRAQQKPHAFGMGSSLQRVISVFRAQQKPHALGMGSWLYLMPG HHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCC SVLLSHGETPHYHRRYGVSLLSSAWDQVGPPRYGRQANSVSINPQTSNTCQPVNTISERR HHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCCC >Mature Secondary Structure GLFYNAQFLCFAHSKTPRFGHGVINTTCNFCVSHTAKKTHVFGMGSSLQRTISVFRAQQ CEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHH KTHALGMGLSIQRVISVFRAQQKPHAFGMGSSLQRVISVFRAQQKPHALGMGSWLYLMPG HHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCC SVLLSHGETPHYHRRYGVSLLSSAWDQVGPPRYGRQANSVSINPQTSNTCQPVNTISERR HHEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA