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The map label for this gene is iolD [H]

Identifier: 170025269

GI number: 170025269

Start: 3349318

End: 3351264

Strand: Reverse

Name: iolD [H]

Synonym: YPK_3048

Alternate gene names: 170025269

Gene position: 3351264-3349318 (Counterclockwise)

Preceding gene: 170025270

Following gene: 170025268

Centisome position: 71.46

GC content: 56.81

Gene sequence:

>1947_bases
ATGAGCACCGTAAACATGGCGATGAAAACAGTACGGATGACCATGGCACAGGCGCTGGTCAGGTTTCTTAATCAGCAATA
TGTGGCCATTGATGGTCAGGAGGTCGCATTTGTCCACGGCGTGATGACGATTTTCGGGCACGGCAATGTACTCGGTATCG
GCCAGGCTCTGGAAGAAAATCCGGGCCATTTACAGGTGCATCAGGGCTGTAACGAGCAGGGCATGGCGCATATGGCGATT
GGTTTTGCGAAACAGTATCGCCGTCAGCGTATCTATGCCGTCAGTTCGTCTATCGGGCCGGGAGCCGCCAATATGGTCAC
CGCAGCGGCCACCGCCACGGCAAACCGCATTCCGCTGCTGCTATTGCCGGGGGATATCTACGCCAGCCGTCAGCCTGACC
CGGTGTTACAGCAGATCGAGCAATATCACGACCTTAGTATTAGCACTAACGATTGCTTCCGCCCGGTATCACGTTACTGG
GATCGCATTAATCGCCCTGAGCAATTGATGAGCGCCATGCTGAGTGCTATGCGAGTACTGACTGACCCGGCGGATACCGG
TGCGGTGACCCTTTGTCTGCCTCAGGATGTGCAGGGCGAAGCGTGGGATTACCCGGCGAGCTTCTTTGAGCGCCGGGTGC
ATCGTATCGAGCGCCGTCCACCGGATACGCGCAGGCTTTCTGATGCGCTCAGCCTGATCGCCCGTAAACGCCGCCCGCTG
GTGGTGTGTGGCGGCGGCGTGCGCTATTCGGGGGCGCATGAGGCGTTTCGTGCATTTGTGGAAAACGCTCAATTACCCTT
TACTGAAACCCAAGCGGGCAAAGGGGCGCTGCCAAGTGATCATCCCCTCAACTTGGGGGGAATTGGTGTCACTGGCGGGT
TGGCCGCTAACCGGTTAGCTCCACAGGCTGATCTGGTGATCGGCATCGGTACCCGGCTCACCGATTTCACTACGGGTTCC
AAAGCACTATTTTCTCACCCGGAGGTGGCGTTTTTGCTGCTTAACGTGGCGGAATTCGATGCGCTTAAACTGGATGCCAC
GGCCCTGATTGCCGATGCGCGGGTGGGGCTTGAGGCATTAACCGAAGGGCTGACAGGTTATCGCACCGCTTGGCAGGGCG
ATATCATTGAGGCCAAAGCAGCGTGGCGCGACGAATGTCAACGGCTTTGGTCACGCACCTGGCGGCCTGATGAGGTGCCA
GAGGTGGCCGGTCATCTTGATGATTCGCTACAAGAATACGCCGAGGTGCTCAATACCACACTGACCCAGACTCGGGTACT
TGGGCTTATCAACCAGCATATTGAAGACGATGCCATTGTCGTGGGGGCGGCGGGGTCGCTGCCGGGGGATTTACAGCGTC
TATGGCAGGTAAAAACGGCAGACACCTATCATCTTGAATACGGTTATTCATGCATGGGCTATGAAATCGCTGCCGCCATC
GGGGCGAAAATTGCGATGCCACATCAACCGGTGTACGCCATGGTGGGTGATGGCTCCTATATGATGCTGCATTCCGAGCT
GCACACGGCGGTACAAGAGGGGCTAAAAATTACCGTCCTACTGTTTGATAACGCCGGATTCGGCTGTATCAACAACCTGC
AGATGGGTCACGGGATGAGCAGTTTTTGTACCGAGAGCCGCCACCGTAACCACGAGTCGGGGCAACTCAATGGCCCATTG
ATTCGCGTTGATTTCGCCCAAAACGCCGAAAGTTATGGCTGCCGCGCCTGGCGGGTGCACGATGAACCAAGCCTGCTAGC
GGCATTGGCAGCATCCCGCGATCATCCGGGGCCGGTGCTACTGGATATTAAAGTCTTGCCGAAAAGCATGACGCACGATT
ATGCGTCTTGGTGGCGTACTGGCGATGCGCAAATCGCCCGTTCACCCGCGGTACAGCAGGCTGCAGAGCGAACCCAGATG
AAGGTAAAACGTGCCCGTCAGTACTAA

Upstream 100 bases:

>100_bases
TACACGCGGATGAAAACTATCACTGCCCGCTGGCCAGAAGCACAGCATGATCAGGGCGCGGCATTCTCTATGCCGACACT
CGGTTGAAGGGAGAGGCCGC

Downstream 100 bases:

>100_bases
CCCTCCGTTATCCTGCCTGTTCATCCGTCGTTGGCTGCAAAAAATGGGGTTAGTTTTAGAAAATGTTGTGACTGTGATAG
CAAAACTAACTCACTTTATT

Product: thiamine pyrophosphate binding domain-containing protein

Products: pyruvate; 2-aceto-2-hydroxy-butyrate; CO2 [C]

Alternate protein names: THcHDO hydrolase [H]

Number of amino acids: Translated: 648; Mature: 647

Protein sequence:

>648_residues
MSTVNMAMKTVRMTMAQALVRFLNQQYVAIDGQEVAFVHGVMTIFGHGNVLGIGQALEENPGHLQVHQGCNEQGMAHMAI
GFAKQYRRQRIYAVSSSIGPGAANMVTAAATATANRIPLLLLPGDIYASRQPDPVLQQIEQYHDLSISTNDCFRPVSRYW
DRINRPEQLMSAMLSAMRVLTDPADTGAVTLCLPQDVQGEAWDYPASFFERRVHRIERRPPDTRRLSDALSLIARKRRPL
VVCGGGVRYSGAHEAFRAFVENAQLPFTETQAGKGALPSDHPLNLGGIGVTGGLAANRLAPQADLVIGIGTRLTDFTTGS
KALFSHPEVAFLLLNVAEFDALKLDATALIADARVGLEALTEGLTGYRTAWQGDIIEAKAAWRDECQRLWSRTWRPDEVP
EVAGHLDDSLQEYAEVLNTTLTQTRVLGLINQHIEDDAIVVGAAGSLPGDLQRLWQVKTADTYHLEYGYSCMGYEIAAAI
GAKIAMPHQPVYAMVGDGSYMMLHSELHTAVQEGLKITVLLFDNAGFGCINNLQMGHGMSSFCTESRHRNHESGQLNGPL
IRVDFAQNAESYGCRAWRVHDEPSLLAALAASRDHPGPVLLDIKVLPKSMTHDYASWWRTGDAQIARSPAVQQAAERTQM
KVKRARQY

Sequences:

>Translated_648_residues
MSTVNMAMKTVRMTMAQALVRFLNQQYVAIDGQEVAFVHGVMTIFGHGNVLGIGQALEENPGHLQVHQGCNEQGMAHMAI
GFAKQYRRQRIYAVSSSIGPGAANMVTAAATATANRIPLLLLPGDIYASRQPDPVLQQIEQYHDLSISTNDCFRPVSRYW
DRINRPEQLMSAMLSAMRVLTDPADTGAVTLCLPQDVQGEAWDYPASFFERRVHRIERRPPDTRRLSDALSLIARKRRPL
VVCGGGVRYSGAHEAFRAFVENAQLPFTETQAGKGALPSDHPLNLGGIGVTGGLAANRLAPQADLVIGIGTRLTDFTTGS
KALFSHPEVAFLLLNVAEFDALKLDATALIADARVGLEALTEGLTGYRTAWQGDIIEAKAAWRDECQRLWSRTWRPDEVP
EVAGHLDDSLQEYAEVLNTTLTQTRVLGLINQHIEDDAIVVGAAGSLPGDLQRLWQVKTADTYHLEYGYSCMGYEIAAAI
GAKIAMPHQPVYAMVGDGSYMMLHSELHTAVQEGLKITVLLFDNAGFGCINNLQMGHGMSSFCTESRHRNHESGQLNGPL
IRVDFAQNAESYGCRAWRVHDEPSLLAALAASRDHPGPVLLDIKVLPKSMTHDYASWWRTGDAQIARSPAVQQAAERTQM
KVKRARQY
>Mature_647_residues
STVNMAMKTVRMTMAQALVRFLNQQYVAIDGQEVAFVHGVMTIFGHGNVLGIGQALEENPGHLQVHQGCNEQGMAHMAIG
FAKQYRRQRIYAVSSSIGPGAANMVTAAATATANRIPLLLLPGDIYASRQPDPVLQQIEQYHDLSISTNDCFRPVSRYWD
RINRPEQLMSAMLSAMRVLTDPADTGAVTLCLPQDVQGEAWDYPASFFERRVHRIERRPPDTRRLSDALSLIARKRRPLV
VCGGGVRYSGAHEAFRAFVENAQLPFTETQAGKGALPSDHPLNLGGIGVTGGLAANRLAPQADLVIGIGTRLTDFTTGSK
ALFSHPEVAFLLLNVAEFDALKLDATALIADARVGLEALTEGLTGYRTAWQGDIIEAKAAWRDECQRLWSRTWRPDEVPE
VAGHLDDSLQEYAEVLNTTLTQTRVLGLINQHIEDDAIVVGAAGSLPGDLQRLWQVKTADTYHLEYGYSCMGYEIAAAIG
AKIAMPHQPVYAMVGDGSYMMLHSELHTAVQEGLKITVLLFDNAGFGCINNLQMGHGMSSFCTESRHRNHESGQLNGPLI
RVDFAQNAESYGCRAWRVHDEPSLLAALAASRDHPGPVLLDIKVLPKSMTHDYASWWRTGDAQIARSPAVQQAAERTQMK
VKRARQY

Specific function: Involved in the cleavage of the C1-C2 bond of 3D- (3,5/4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG) [H]

COG id: COG3962

COG function: function code E; Acetolactate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TPP enzyme family [H]

Homologues:

Organism=Homo sapiens, GI93004078, Length=563, Percent_Identity=21.8472468916519, Blast_Score=87, Evalue=5e-17,
Organism=Homo sapiens, GI21361361, Length=484, Percent_Identity=23.1404958677686, Blast_Score=80, Evalue=9e-15,
Organism=Escherichia coli, GI1790104, Length=618, Percent_Identity=27.1844660194175, Blast_Score=155, Evalue=1e-38,
Organism=Escherichia coli, GI87081685, Length=549, Percent_Identity=27.5045537340619, Blast_Score=138, Evalue=1e-33,
Organism=Escherichia coli, GI1786717, Length=546, Percent_Identity=24.7252747252747, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1788716, Length=438, Percent_Identity=23.972602739726, Blast_Score=98, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6323755, Length=653, Percent_Identity=25.2679938744257, Blast_Score=140, Evalue=8e-34,
Organism=Drosophila melanogaster, GI19922626, Length=605, Percent_Identity=23.1404958677686, Blast_Score=83, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012000
- InterPro:   IPR012001
- InterPro:   IPR000399
- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]

EC number: 2.2.1.6 [C]

Molecular weight: Translated: 71161; Mature: 71030

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS00187 TPP_ENZYMES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVNMAMKTVRMTMAQALVRFLNQQYVAIDGQEVAFVHGVMTIFGHGNVLGIGQALEEN
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEECCHHHHCC
PGHLQVHQGCNEQGMAHMAIGFAKQYRRQRIYAVSSSIGPGAANMVTAAATATANRIPLL
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHCCCCCEEE
LLPGDIYASRQPDPVLQQIEQYHDLSISTNDCFRPVSRYWDRINRPEQLMSAMLSAMRVL
EECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TDPADTGAVTLCLPQDVQGEAWDYPASFFERRVHRIERRPPDTRRLSDALSLIARKRRPL
CCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCE
VVCGGGVRYSGAHEAFRAFVENAQLPFTETQAGKGALPSDHPLNLGGIGVTGGLAANRLA
EEECCCCEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
PQADLVIGIGTRLTDFTTGSKALFSHPEVAFLLLNVAEFDALKLDATALIADARVGLEAL
CCCCEEEECCCCEEECCCCCHHHHCCCCHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHH
TEGLTGYRTAWQGDIIEAKAAWRDECQRLWSRTWRPDEVPEVAGHLDDSLQEYAEVLNTT
HCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LTQTRVLGLINQHIEDDAIVVGAAGSLPGDLQRLWQVKTADTYHLEYGYSCMGYEIAAAI
HHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
GAKIAMPHQPVYAMVGDGSYMMLHSELHTAVQEGLKITVLLFDNAGFGCINNLQMGHGMS
CCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHH
SFCTESRHRNHESGQLNGPLIRVDFAQNAESYGCRAWRVHDEPSLLAALAASRDHPGPVL
HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCEE
LDIKVLPKSMTHDYASWWRTGDAQIARSPAVQQAAERTQMKVKRARQY
EEEEECCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STVNMAMKTVRMTMAQALVRFLNQQYVAIDGQEVAFVHGVMTIFGHGNVLGIGQALEEN
CHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCEEECCHHHHCC
PGHLQVHQGCNEQGMAHMAIGFAKQYRRQRIYAVSSSIGPGAANMVTAAATATANRIPLL
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHCCCCCEEE
LLPGDIYASRQPDPVLQQIEQYHDLSISTNDCFRPVSRYWDRINRPEQLMSAMLSAMRVL
EECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
TDPADTGAVTLCLPQDVQGEAWDYPASFFERRVHRIERRPPDTRRLSDALSLIARKRRPL
CCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCE
VVCGGGVRYSGAHEAFRAFVENAQLPFTETQAGKGALPSDHPLNLGGIGVTGGLAANRLA
EEECCCCEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
PQADLVIGIGTRLTDFTTGSKALFSHPEVAFLLLNVAEFDALKLDATALIADARVGLEAL
CCCCEEEECCCCEEECCCCCHHHHCCCCHHHHHHHHHHHCCEEECHHHHHHHHHHHHHHH
TEGLTGYRTAWQGDIIEAKAAWRDECQRLWSRTWRPDEVPEVAGHLDDSLQEYAEVLNTT
HCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LTQTRVLGLINQHIEDDAIVVGAAGSLPGDLQRLWQVKTADTYHLEYGYSCMGYEIAAAI
HHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
GAKIAMPHQPVYAMVGDGSYMMLHSELHTAVQEGLKITVLLFDNAGFGCINNLQMGHGMS
CCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCHH
SFCTESRHRNHESGQLNGPLIRVDFAQNAESYGCRAWRVHDEPSLLAALAASRDHPGPVL
HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCEE
LDIKVLPKSMTHDYASWWRTGDAQIARSPAVQQAAERTQMKVKRARQY
EEEEECCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: FAD [C]

Metal ions: Mg2+ [C]

Kcat value (1/min): 4002 [C]

Specific activity: 53

Km value (mM): 5 {2-oxobutanoate}} 1 {2-oxobutanoate}} 7.6 {pyruvate}} 7 {pyruvate}} 2.9 {pyruvate}} 2.6 {pyruvate}} 1.3 {pyruvate}} 1 {pyruvate}} [C]

Substrates: acetolactate; CO2; pyruvate; 2-oxobutanoate [C]

Specific reaction: acetolactate + CO2 = 2pyruvate pyruvate + 2-oxobutanoate = 2-aceto-2-hydroxy-butyrate + CO2 [C]

General reaction: C-C bond formation; Decarboxylation [C]

Inhibitor: 2-oxobutanoate; chlorimuronethyl; chlorsulphuron; Ile; imazapyr; Leu; Val [C]

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA