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The map label for this gene is rcsB [C]

Identifier: 170025254

GI number: 170025254

Start: 3333553

End: 3334143

Strand: Reverse

Name: rcsB [C]

Synonym: YPK_3033

Alternate gene names: 170025254

Gene position: 3334143-3333553 (Counterclockwise)

Preceding gene: 170025256

Following gene: 170025252

Centisome position: 71.1

GC content: 35.53

Gene sequence:

>591_bases
ATGATAGTCGATAACGATAAATATCAAACATTAGGTATGGTATCTATCGTAAAAAAAATCTTCACATCCTTAGGATTTAA
AAAAGAGATTAAATTCTACCGAAAAGCTTTTTATTCAGCAGATGTGATTTTTATTGGCGTCGATGAATTCAGTTTTTTCG
AGGCACTCAAACGTCTGGATAAGACCCCCGCAGAAGCGGATGTCTTTTTGATTTGTGATGCCAGATTGAATAGTTTTTTA
CAAGGTATTCCAAGATTTAGCGATGTGACCATGATCTTCAGAGAAGACTCATTGGAAACGGTGAGTAATAAAATCGCTAC
TGTATTTAAGCGTAAGTTCCGTGGGTTTAAAGACAATTTAATCGAACGTAAAACAGCTAAAGTACTTCATCTAGTATCAT
CTGAGCGTCAATATCTGACACCGAATGAAAATATTGTACTGAAGTTATTCAATGAAGGCTTTTCTGGTGGTGATATTGCC
AGAATCTTGAAGAAAAGTGAAAAAACAGTCAGTGGACAAAAGCGCTCCGCCATGAAGAAACTTGGTGCACGGACTGATGT
CGAGTTAATAAAAATGTTTATGTTTAAATAA

Upstream 100 bases:

>100_bases
TATGATATTCAATCGTATTTTATCATAGAGCAAACAGATAAGCATCAGGGATTCACAGAGTGCTTAAGCACTAATGGGCA
TAGCCAAAATGATAAGCTGC

Downstream 100 bases:

>100_bases
TTAGCATAAGGATATCTGGGGTTGTCGTTATTTTTATTGTCGACACCAGAGGATGTTATAAGGGACGCTTTTGCATTTGC
AGGCAAGGACGCTTGCGTTA

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: LuxR Family Regulatory Protein

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MIVDNDKYQTLGMVSIVKKIFTSLGFKKEIKFYRKAFYSADVIFIGVDEFSFFEALKRLDKTPAEADVFLICDARLNSFL
QGIPRFSDVTMIFREDSLETVSNKIATVFKRKFRGFKDNLIERKTAKVLHLVSSERQYLTPNENIVLKLFNEGFSGGDIA
RILKKSEKTVSGQKRSAMKKLGARTDVELIKMFMFK

Sequences:

>Translated_196_residues
MIVDNDKYQTLGMVSIVKKIFTSLGFKKEIKFYRKAFYSADVIFIGVDEFSFFEALKRLDKTPAEADVFLICDARLNSFL
QGIPRFSDVTMIFREDSLETVSNKIATVFKRKFRGFKDNLIERKTAKVLHLVSSERQYLTPNENIVLKLFNEGFSGGDIA
RILKKSEKTVSGQKRSAMKKLGARTDVELIKMFMFK
>Mature_196_residues
MIVDNDKYQTLGMVSIVKKIFTSLGFKKEIKFYRKAFYSADVIFIGVDEFSFFEALKRLDKTPAEADVFLICDARLNSFL
QGIPRFSDVTMIFREDSLETVSNKIATVFKRKFRGFKDNLIERKTAKVLHLVSSERQYLTPNENIVLKLFNEGFSGGDIA
RILKKSEKTVSGQKRSAMKKLGARTDVELIKMFMFK

Specific function: Rcsb Is A Member Of The Two-Component Regulatory System Rcsb/Rcsc, Which Regulates The Expression Of Genes Involved In Colanic Acid Capsule Synthesis. Rcsb Acts As The Effector. Additional Control Is Provided By The Dependence On The Alternate Sigma Facto

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22570; Mature: 22570

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVDNDKYQTLGMVSIVKKIFTSLGFKKEIKFYRKAFYSADVIFIGVDEFSFFEALKRLD
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHC
KTPAEADVFLICDARLNSFLQGIPRFSDVTMIFREDSLETVSNKIATVFKRKFRGFKDNL
CCCCCCCEEEEEHHHHHHHHHHCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHCCHHHHH
IERKTAKVLHLVSSERQYLTPNENIVLKLFNEGFSGGDIARILKKSEKTVSGQKRSAMKK
HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHH
LGARTDVELIKMFMFK
HCCCCHHHHHHHHHCC
>Mature Secondary Structure
MIVDNDKYQTLGMVSIVKKIFTSLGFKKEIKFYRKAFYSADVIFIGVDEFSFFEALKRLD
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHC
KTPAEADVFLICDARLNSFLQGIPRFSDVTMIFREDSLETVSNKIATVFKRKFRGFKDNL
CCCCCCCEEEEEHHHHHHHHHHCCCCCHHEEEEECCHHHHHHHHHHHHHHHHHCCHHHHH
IERKTAKVLHLVSSERQYLTPNENIVLKLFNEGFSGGDIARILKKSEKTVSGQKRSAMKK
HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHHHHH
LGARTDVELIKMFMFK
HCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA