| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170025126
Identifier: 170025126
GI number: 170025126
Start: 3198698
End: 3199024
Strand: Reverse
Name: 170025126
Synonym: YPK_2904
Alternate gene names: NA
Gene position: 3199024-3198698 (Counterclockwise)
Preceding gene: 170025128
Following gene: 170025120
Centisome position: 68.22
GC content: 44.95
Gene sequence:
>327_bases ATGCCATCTGTGAAAGGTTTTAAACATGTTGGTTTTCTTACTCGCAAAAAAGGGCAGAGCTTTGAGGATTTTGTGAAGCA CTGGGAAGAGGTTCATGCCGCAATCACACTCAAGCTTCCCGGCTTGAGAGGTTATGTACTCAATCCTATTGACCGCGAAA AATACCCGGACTCACCAGTTGATGGTTTCTCCGAGCTCTGGTTTGACTCCATTGAAGACGCTATTGCGGCTTTTGATTCA CCCATCGGTAAAGCAGCATACGAAGATGTCCCCAATTTCGTAGAGAGTGCCGCTATTACCTATATCACTGAAATCAGAAA GCTGTAA
Upstream 100 bases:
>100_bases GGCGCAGAGACCAGGGCTTCTGCAACCCGGACGCCAAATTTTATCGAGCAGTTTTTCTATTACTTTTTTAAACATTTTAC GTCACTTTAAGGAGGCGATG
Downstream 100 bases:
>100_bases TTTATCCGCACCTAGGCGGTGCGCTGCCCCTGAAACGCCTAGGCGATTTTTCGTCGAAACATACCATAAGCCGCACTGCC CGTAGTGGCAGTGATCACCA
Product: ethyl tert-butyl ether degradation EthD
Products: NA
Alternate protein names: Ethyl Tert-Butyl Ether Degradation EthD
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MPSVKGFKHVGFLTRKKGQSFEDFVKHWEEVHAAITLKLPGLRGYVLNPIDREKYPDSPVDGFSELWFDSIEDAIAAFDS PIGKAAYEDVPNFVESAAITYITEIRKL
Sequences:
>Translated_108_residues MPSVKGFKHVGFLTRKKGQSFEDFVKHWEEVHAAITLKLPGLRGYVLNPIDREKYPDSPVDGFSELWFDSIEDAIAAFDS PIGKAAYEDVPNFVESAAITYITEIRKL >Mature_107_residues PSVKGFKHVGFLTRKKGQSFEDFVKHWEEVHAAITLKLPGLRGYVLNPIDREKYPDSPVDGFSELWFDSIEDAIAAFDSP IGKAAYEDVPNFVESAAITYITEIRKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12204; Mature: 12073
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSVKGFKHVGFLTRKKGQSFEDFVKHWEEVHAAITLKLPGLRGYVLNPIDREKYPDSPV CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCC DGFSELWFDSIEDAIAAFDSPIGKAAYEDVPNFVESAAITYITEIRKL CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSVKGFKHVGFLTRKKGQSFEDFVKHWEEVHAAITLKLPGLRGYVLNPIDREKYPDSPV CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCC DGFSELWFDSIEDAIAAFDSPIGKAAYEDVPNFVESAAITYITEIRKL CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA