| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is fabG [H]
Identifier: 170024999
GI number: 170024999
Start: 3061746
End: 3062561
Strand: Direct
Name: fabG [H]
Synonym: YPK_2774
Alternate gene names: 170024999
Gene position: 3061746-3062561 (Clockwise)
Preceding gene: 170024998
Following gene: 170025001
Centisome position: 65.29
GC content: 58.46
Gene sequence:
>816_bases ATGAATGACCACAAAAAGCGGTCTGATCTCGAAAAGCGGCCTGATCTCGAAAAACAGTCTTATCCCGAAAAACAGAGCCT GTCTGGGAAGCGGGCGCTGGTGACTGGTGCAGGTCAGGGGATCGGGGCGGCAATCGCTGAAGGGCTGGCGGCAACCGGTG CGGAAGTGATCTGCACCGATATTTCACGTGAACGCGCTGCAGCAACCGCACAAGCACTGAACGCCAAGGGCTACAACGTG CGGGCCGAGGAACTGGACGTTACCGACAGCGCGGCTATTGACGCTCTGGCCGCCGCGTTACCGCCATTGGACGTGCTGGT CTGCAATGCCGGGATCGTGACCCATACCCCGGCTGAAGAGATGACCGACGCGGACTGGGATAAGGTCATCGCCGTCAACT TGACTGGCGTGTTTCGCACCTGTCGTGGCTTTGGCCGCCGGATGCTTGAAGCGGGGCGCGGCTCGATCATCAATATCGGT TCGATATCGGGCCAAATCGTTAATGTGCCGCAGCCCCAGTGCCACTACAATGCATCGAAGGCGGGAGTACACCATTTGAC CAAATCACTGGCGGTGGAGTGGGCCACACGTGGCGTTCGCGTCAATGCCGTCGCCCCCACCTATATAGAAACACCACTGA TACAAGGGTTGACCAGCCAGCCGGGGCGGGTATCGCGATGGCTCGATATGACCCCCATGGGGCGGTTAGGCAGCCCCCAT GAAATTGCTTCTGTGGTGCAGTTTTTGGCTTCGGAGGCCTCCAGCTTGCTGACAGGTTCAATCATTACTGCCGATGCGGG ATATACCAGCATCTGA
Upstream 100 bases:
>100_bases GATGCGTCGGTCAAAAAACTGCAACAACTGGCGTCTGAAGAGGCCCTACGGGGACTGCGCGGTGAGCCACTGCGCTGCCC ACTGACTTAAGGAGAAGAGG
Downstream 100 bases:
>100_bases GGGCGGTCAGGAGAAGCAGAGGAACACGTACTGGCAGCGGAGAGAATCAGCCGATCGTAAAAACGCATTTAAGGCGCAGT CACCGCTTCCAGCGCAATCA
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MNDHKKRSDLEKRPDLEKQSYPEKQSLSGKRALVTGAGQGIGAAIAEGLAATGAEVICTDISRERAAATAQALNAKGYNV RAEELDVTDSAAIDALAAALPPLDVLVCNAGIVTHTPAEEMTDADWDKVIAVNLTGVFRTCRGFGRRMLEAGRGSIINIG SISGQIVNVPQPQCHYNASKAGVHHLTKSLAVEWATRGVRVNAVAPTYIETPLIQGLTSQPGRVSRWLDMTPMGRLGSPH EIASVVQFLASEASSLLTGSIITADAGYTSI
Sequences:
>Translated_271_residues MNDHKKRSDLEKRPDLEKQSYPEKQSLSGKRALVTGAGQGIGAAIAEGLAATGAEVICTDISRERAAATAQALNAKGYNV RAEELDVTDSAAIDALAAALPPLDVLVCNAGIVTHTPAEEMTDADWDKVIAVNLTGVFRTCRGFGRRMLEAGRGSIINIG SISGQIVNVPQPQCHYNASKAGVHHLTKSLAVEWATRGVRVNAVAPTYIETPLIQGLTSQPGRVSRWLDMTPMGRLGSPH EIASVVQFLASEASSLLTGSIITADAGYTSI >Mature_271_residues MNDHKKRSDLEKRPDLEKQSYPEKQSLSGKRALVTGAGQGIGAAIAEGLAATGAEVICTDISRERAAATAQALNAKGYNV RAEELDVTDSAAIDALAAALPPLDVLVCNAGIVTHTPAEEMTDADWDKVIAVNLTGVFRTCRGFGRRMLEAGRGSIINIG SISGQIVNVPQPQCHYNASKAGVHHLTKSLAVEWATRGVRVNAVAPTYIETPLIQGLTSQPGRVSRWLDMTPMGRLGSPH EIASVVQFLASEASSLLTGSIITADAGYTSI
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=249, Percent_Identity=40.9638554216867, Blast_Score=146, Evalue=2e-35, Organism=Homo sapiens, GI19923817, Length=268, Percent_Identity=33.2089552238806, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI66933014, Length=247, Percent_Identity=33.6032388663968, Blast_Score=112, Evalue=3e-25, Organism=Homo sapiens, GI7705925, Length=245, Percent_Identity=30.6122448979592, Blast_Score=110, Evalue=1e-24, Organism=Homo sapiens, GI32483357, Length=253, Percent_Identity=30.4347826086957, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI10190704, Length=249, Percent_Identity=31.7269076305221, Blast_Score=93, Evalue=3e-19, Organism=Homo sapiens, GI40254992, Length=246, Percent_Identity=31.3008130081301, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI4758504, Length=262, Percent_Identity=32.824427480916, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI4503301, Length=262, Percent_Identity=27.8625954198473, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI5031737, Length=257, Percent_Identity=28.7937743190661, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI31542939, Length=205, Percent_Identity=32.1951219512195, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI126723750, Length=258, Percent_Identity=27.5193798449612, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI4504505, Length=196, Percent_Identity=31.1224489795918, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI59889578, Length=162, Percent_Identity=34.5679012345679, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI7705855, Length=193, Percent_Identity=29.0155440414508, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI310128830, Length=211, Percent_Identity=27.4881516587678, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI310115468, Length=211, Percent_Identity=27.4881516587678, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI83715985, Length=262, Percent_Identity=31.6793893129771, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI142976729, Length=208, Percent_Identity=28.3653846153846, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI226371731, Length=245, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI33667109, Length=198, Percent_Identity=30.3030303030303, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1787335, Length=247, Percent_Identity=41.2955465587045, Blast_Score=159, Evalue=1e-40, Organism=Escherichia coli, GI1790717, Length=247, Percent_Identity=36.4372469635627, Blast_Score=153, Evalue=1e-38, Organism=Escherichia coli, GI87082100, Length=256, Percent_Identity=37.5, Blast_Score=134, Evalue=6e-33, Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=34.2741935483871, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI87082160, Length=247, Percent_Identity=31.5789473684211, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI2367175, Length=243, Percent_Identity=34.9794238683128, Blast_Score=107, Evalue=6e-25, Organism=Escherichia coli, GI1789057, Length=253, Percent_Identity=31.6205533596838, Blast_Score=104, Evalue=8e-24, Organism=Escherichia coli, GI1788459, Length=244, Percent_Identity=33.1967213114754, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787905, Length=245, Percent_Identity=32.6530612244898, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=30.5882352941176, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI2367365, Length=247, Percent_Identity=31.1740890688259, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1789378, Length=259, Percent_Identity=31.2741312741313, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1787820, Length=180, Percent_Identity=33.8888888888889, Blast_Score=76, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=39.4308943089431, Blast_Score=142, Evalue=2e-34, Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=36.9477911646586, Blast_Score=133, Evalue=9e-32, Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=31.3492063492063, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=30.6772908366534, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI193204405, Length=263, Percent_Identity=33.8403041825095, Blast_Score=107, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17536651, Length=267, Percent_Identity=31.8352059925094, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17536025, Length=254, Percent_Identity=32.6771653543307, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17562910, Length=265, Percent_Identity=32.4528301886792, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17564282, Length=204, Percent_Identity=31.3725490196078, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17561272, Length=261, Percent_Identity=34.8659003831418, Blast_Score=91, Evalue=9e-19, Organism=Caenorhabditis elegans, GI193203117, Length=218, Percent_Identity=29.3577981651376, Blast_Score=90, Evalue=9e-19, Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=30.6772908366534, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17562906, Length=267, Percent_Identity=29.5880149812734, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71994604, Length=252, Percent_Identity=30.952380952381, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17560150, Length=268, Percent_Identity=29.8507462686567, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI193203115, Length=221, Percent_Identity=28.5067873303167, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17562908, Length=266, Percent_Identity=30.8270676691729, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17538480, Length=265, Percent_Identity=30.188679245283, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=31.2252964426877, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI72000259, Length=262, Percent_Identity=29.3893129770992, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=30.188679245283, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17538182, Length=257, Percent_Identity=31.5175097276265, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17531453, Length=268, Percent_Identity=29.8507462686567, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=29.3893129770992, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17562990, Length=267, Percent_Identity=29.9625468164794, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17560220, Length=260, Percent_Identity=29.6153846153846, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=29.3233082706767, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17538486, Length=264, Percent_Identity=28.4090909090909, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17567345, Length=210, Percent_Identity=26.1904761904762, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17563726, Length=268, Percent_Identity=26.865671641791, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17565030, Length=267, Percent_Identity=28.8389513108614, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17551412, Length=264, Percent_Identity=28.4090909090909, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17508895, Length=242, Percent_Identity=24.3801652892562, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17544670, Length=267, Percent_Identity=25.0936329588015, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17508651, Length=244, Percent_Identity=31.9672131147541, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17568967, Length=195, Percent_Identity=29.2307692307692, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322861, Length=266, Percent_Identity=27.0676691729323, Blast_Score=76, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6324126, Length=266, Percent_Identity=28.1954887218045, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6322067, Length=189, Percent_Identity=32.8042328042328, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6320089, Length=194, Percent_Identity=28.3505154639175, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI24639444, Length=249, Percent_Identity=37.3493975903614, Blast_Score=135, Evalue=3e-32, Organism=Drosophila melanogaster, GI24643142, Length=243, Percent_Identity=33.7448559670782, Blast_Score=117, Evalue=9e-27, Organism=Drosophila melanogaster, GI23397609, Length=251, Percent_Identity=34.6613545816733, Blast_Score=111, Evalue=4e-25, Organism=Drosophila melanogaster, GI21355319, Length=254, Percent_Identity=30.3149606299213, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=30.2788844621514, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI21357041, Length=254, Percent_Identity=31.8897637795276, Blast_Score=87, Evalue=9e-18, Organism=Drosophila melanogaster, GI17737361, Length=255, Percent_Identity=32.5490196078431, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=30.3149606299213, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI24644337, Length=250, Percent_Identity=32, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24581726, Length=210, Percent_Identity=27.6190476190476, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24649181, Length=197, Percent_Identity=31.4720812182741, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI281364892, Length=196, Percent_Identity=32.1428571428571, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI18859837, Length=257, Percent_Identity=29.5719844357977, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI21355631, Length=177, Percent_Identity=28.2485875706215, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24640442, Length=195, Percent_Identity=29.7435897435897, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI21358495, Length=204, Percent_Identity=29.9019607843137, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 28584; Mature: 28584
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDHKKRSDLEKRPDLEKQSYPEKQSLSGKRALVTGAGQGIGAAIAEGLAATGAEVICTD CCCCHHHHHHHHCCCCCHHCCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEC ISRERAAATAQALNAKGYNVRAEELDVTDSAAIDALAAALPPLDVLVCNAGIVTHTPAEE HHHHHHHHHHHHHCCCCCCEEHHHCCCCHHHHHHHHHHHCCCCEEEEECCCEEECCCHHH MTDADWDKVIAVNLTGVFRTCRGFGRRMLEAGRGSIINIGSISGQIVNVPQPQCHYNASK HCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCCCHH AGVHHLTKSLAVEWATRGVRVNAVAPTYIETPLIQGLTSQPGRVSRWLDMTPMGRLGSPH HHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHH EIASVVQFLASEASSLLTGSIITADAGYTSI HHHHHHHHHHHHHHHHHCCCEEEECCCCCCC >Mature Secondary Structure MNDHKKRSDLEKRPDLEKQSYPEKQSLSGKRALVTGAGQGIGAAIAEGLAATGAEVICTD CCCCHHHHHHHHCCCCCHHCCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEC ISRERAAATAQALNAKGYNVRAEELDVTDSAAIDALAAALPPLDVLVCNAGIVTHTPAEE HHHHHHHHHHHHHCCCCCCEEHHHCCCCHHHHHHHHHHHCCCCEEEEECCCEEECCCHHH MTDADWDKVIAVNLTGVFRTCRGFGRRMLEAGRGSIINIGSISGQIVNVPQPQCHYNASK HCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCCCCCCCCCHH AGVHHLTKSLAVEWATRGVRVNAVAPTYIETPLIQGLTSQPGRVSRWLDMTPMGRLGSPH HHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHH EIASVVQFLASEASSLLTGSIITADAGYTSI HHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]