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The map label for this gene is ydjH [H]

Identifier: 170024632

GI number: 170024632

Start: 2638001

End: 2638960

Strand: Reverse

Name: ydjH [H]

Synonym: YPK_2407

Alternate gene names: 170024632

Gene position: 2638960-2638001 (Counterclockwise)

Preceding gene: 170024633

Following gene: 170024615

Centisome position: 56.27

GC content: 52.6

Gene sequence:

>960_bases
ATGTCAAAAATTGTCAGCCTGGGGATTCATGTTCTTGATGTATTAGGACGTCACGTGAACCGATTCCCCCCCGGTGGAGA
GCTCGATATTATTAATGAAATCCGCTTAACCGTTGCGGGTACAGCGGCTGGGATGAGTGTTGATCTGGCTAAGCTCGGCG
GCGATGTTTATGCGATGGGGGCCGTGGGTCTGGATGAATCGGGCAACTTTATTATCGACACCTTGCGGCGCTATGGGGTT
AATACCGACCACATTGTACGTAAATCAGAGGTACAAACCTCTTGCAGTATGCTGCCCATCAGACCCAATGGCGAGCGGCC
GGTTCTGCATGTTTTGGGGGCCAACGCGACCTATAGGCTTGAAGATATCCATTGGGATGTGATTGCCAGTGCGGATATTC
TCCACTTCGGTGGCACTTATTTACTGCCCGGCCTTGATGGGCCACCCACGGCCACTATCTTAAAATTTGCCAAAGAGCAT
GGGGTGACTACCACGCTGGATTTACTGGTTAACGCCCAACCTGACCTGCTGGCCAAACTGGAGCCCGCGTTGCCTTATAT
CGATTATTTTATGCCCGGCTTAGATGAGGCGCGGGCCATTTGCGGTTTAGAGAAACGTGCTGATGTCATTGCGTTTTTCC
TGAACCGCGGGGTGGGCCACACCGTTTTCAAAATGGGGGCTGAGGGGAGCAGTATTGCGTCACTGGACATGGCGGAGGTT
CTGATCCCCGCGTATAAAGCGCAGGTTGTGGATTCAACCGGCTGCGGTGATTCCTATTGTGCGGCCTTTATTATGGGGTT
AACCAAAGGCTGGGATCTGGCGACATCGGGGCGCTTCGCTTCTGCTGCGGCCTCGCTGGTGGTCTCTGGTTTAGGCTCTG
ATGCGGGGATTATTGATTTTGAGCATACCCTTAAGGTGATGAATACGGCCGAAACCTTACCCATTGCCCAAGAGACTTAA

Upstream 100 bases:

>100_bases
GGCGTTTATTATCGCCGCCGGTAGCGCCTTTGGTTGGCGTAAGTATCGCTAAGGCCGATTTCAGCATTTATGTTTAATCA
ATGATGATGAGGATATCAAT

Downstream 100 bases:

>100_bases
CCCTCGGATCCCAATGACGGTCTATCGTTCGGGTCATTGGGATAGCTCGGTTTTTTTTATCTTGATTAAGGGTAAACTAC
TTTTTCCCTTGGGTAAAAGA

Product: ribokinase-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MSKIVSLGIHVLDVLGRHVNRFPPGGELDIINEIRLTVAGTAAGMSVDLAKLGGDVYAMGAVGLDESGNFIIDTLRRYGV
NTDHIVRKSEVQTSCSMLPIRPNGERPVLHVLGANATYRLEDIHWDVIASADILHFGGTYLLPGLDGPPTATILKFAKEH
GVTTTLDLLVNAQPDLLAKLEPALPYIDYFMPGLDEARAICGLEKRADVIAFFLNRGVGHTVFKMGAEGSSIASLDMAEV
LIPAYKAQVVDSTGCGDSYCAAFIMGLTKGWDLATSGRFASAAASLVVSGLGSDAGIIDFEHTLKVMNTAETLPIAQET

Sequences:

>Translated_319_residues
MSKIVSLGIHVLDVLGRHVNRFPPGGELDIINEIRLTVAGTAAGMSVDLAKLGGDVYAMGAVGLDESGNFIIDTLRRYGV
NTDHIVRKSEVQTSCSMLPIRPNGERPVLHVLGANATYRLEDIHWDVIASADILHFGGTYLLPGLDGPPTATILKFAKEH
GVTTTLDLLVNAQPDLLAKLEPALPYIDYFMPGLDEARAICGLEKRADVIAFFLNRGVGHTVFKMGAEGSSIASLDMAEV
LIPAYKAQVVDSTGCGDSYCAAFIMGLTKGWDLATSGRFASAAASLVVSGLGSDAGIIDFEHTLKVMNTAETLPIAQET
>Mature_318_residues
SKIVSLGIHVLDVLGRHVNRFPPGGELDIINEIRLTVAGTAAGMSVDLAKLGGDVYAMGAVGLDESGNFIIDTLRRYGVN
TDHIVRKSEVQTSCSMLPIRPNGERPVLHVLGANATYRLEDIHWDVIASADILHFGGTYLLPGLDGPPTATILKFAKEHG
VTTTLDLLVNAQPDLLAKLEPALPYIDYFMPGLDEARAICGLEKRADVIAFFLNRGVGHTVFKMGAEGSSIASLDMAEVL
IPAYKAQVVDSTGCGDSYCAAFIMGLTKGWDLATSGRFASAAASLVVSGLGSDAGIIDFEHTLKVMNTAETLPIAQET

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI11545855, Length=255, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI87081971, Length=269, Percent_Identity=27.1375464684015, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI87082343, Length=315, Percent_Identity=29.2063492063492, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788484, Length=289, Percent_Identity=24.9134948096886, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17532905, Length=303, Percent_Identity=28.3828382838284, Blast_Score=78, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6322565, Length=287, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 33881; Mature: 33750

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIVSLGIHVLDVLGRHVNRFPPGGELDIINEIRLTVAGTAAGMSVDLAKLGGDVYAMG
CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCEEEHHHHCCCEEEEE
AVGLDESGNFIIDTLRRYGVNTDHIVRKSEVQTSCSMLPIRPNGERPVLHVLGANATYRL
EECCCCCCCHHHHHHHHHCCCHHHHEEHHHHHHHCCEEEECCCCCCCEEEEECCCCEEEE
EDIHWDVIASADILHFGGTYLLPGLDGPPTATILKFAKEHGVTTTLDLLVNAQPDLLAKL
EECEEEEEECCCEEECCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHC
EPALPYIDYFMPGLDEARAICGLEKRADVIAFFLNRGVGHTVFKMGAEGSSIASLDMAEV
CCCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHEEECCCCCCEEHHHHHHH
LIPAYKAQVVDSTGCGDSYCAAFIMGLTKGWDLATSGRFASAAASLVVSGLGSDAGIIDF
HHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEH
EHTLKVMNTAETLPIAQET
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SKIVSLGIHVLDVLGRHVNRFPPGGELDIINEIRLTVAGTAAGMSVDLAKLGGDVYAMG
CCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCEEEHHHHCCCEEEEE
AVGLDESGNFIIDTLRRYGVNTDHIVRKSEVQTSCSMLPIRPNGERPVLHVLGANATYRL
EECCCCCCCHHHHHHHHHCCCHHHHEEHHHHHHHCCEEEECCCCCCCEEEEECCCCEEEE
EDIHWDVIASADILHFGGTYLLPGLDGPPTATILKFAKEHGVTTTLDLLVNAQPDLLAKL
EECEEEEEECCCEEECCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHC
EPALPYIDYFMPGLDEARAICGLEKRADVIAFFLNRGVGHTVFKMGAEGSSIASLDMAEV
CCCCCHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHEEECCCCCCEEHHHHHHH
LIPAYKAQVVDSTGCGDSYCAAFIMGLTKGWDLATSGRFASAAASLVVSGLGSDAGIIDF
HHHHHHHHEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEH
EHTLKVMNTAETLPIAQET
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]