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The map label for this gene is yecS [H]

Identifier: 170024600

GI number: 170024600

Start: 2610014

End: 2610676

Strand: Reverse

Name: yecS [H]

Synonym: YPK_2375

Alternate gene names: 170024600

Gene position: 2610676-2610014 (Counterclockwise)

Preceding gene: 170024601

Following gene: 170024599

Centisome position: 55.67

GC content: 49.47

Gene sequence:

>663_bases
ATGCCAGAAAGTATGCAATTGGTGCTGGATTCAGCACCATTTTTATTGAAGGGTGCCTGGCTAACGCTCCAACTTAGTCT
TGGGGGGATGTTTCTCGGGCTGCTCTTAGGGTTTATGCTAGCGATGATGCGGTTATCGCACTTCTGGCCTTTTTCACTTA
TTTCCCGCTTTTATGTCTCTATCTTCCGTGGTACGCCACTGATTGCTCAGTTATTCATGATTTACTATGGCCTGCCTCAG
TTTGGCATTGAACTGGATCCGATGCCTGCGGCCTTGATTGGTTTATCGCTGAATACTGCCGCTTATACTTCAGAAACATT
GCGGGCGGCGATTTCATCTATTGAGAAAGGGCAGTGGGAAGCGGCAGCCAGTATCGGCATGACACGCTGGCAGGCACTGT
ATCGTGTTATTTTGCCACAGGCAGGGCGCACCGCCTTGCCCCCACTGGGCAACAGCTTTATTGGCTTGGTAAAGGATACC
TCTCTGGCCGCGACCATCCAGGTTCCGGAGCTTTTCCGTCAAGCACAATTGATCACATCACGTACGATGGAAGTTTTCAC
TATGTATCTGGCGGCATCGTTGATCTACTGGATAATGGCAACACTGTTATCGGCATTACAAAGTCGGCTGGAAGCACATG
TTAATCGCCAGGATCAGGAGTAA

Upstream 100 bases:

>100_bases
AATTGTTAGCCGCAGTCAATAATGCTATTGCTGAGATGCAAAAAGACGGCACGCTAGCCAAGATTTCTGAGAAATACTTT
GGTGCGGACGTGACTCAATA

Downstream 100 bases:

>100_bases
CCATGAGTACCATTGATATTAAAAAATTGACCAAGCAGTTTAAGGGTCAACAGGTGCTGCACGGTATCGATCTTGAAGTG
AATAGCGGTGAAGTGGTGGC

Product: polar amino acid ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MPESMQLVLDSAPFLLKGAWLTLQLSLGGMFLGLLLGFMLAMMRLSHFWPFSLISRFYVSIFRGTPLIAQLFMIYYGLPQ
FGIELDPMPAALIGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMTRWQALYRVILPQAGRTALPPLGNSFIGLVKDT
SLAATIQVPELFRQAQLITSRTMEVFTMYLAASLIYWIMATLLSALQSRLEAHVNRQDQE

Sequences:

>Translated_220_residues
MPESMQLVLDSAPFLLKGAWLTLQLSLGGMFLGLLLGFMLAMMRLSHFWPFSLISRFYVSIFRGTPLIAQLFMIYYGLPQ
FGIELDPMPAALIGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMTRWQALYRVILPQAGRTALPPLGNSFIGLVKDT
SLAATIQVPELFRQAQLITSRTMEVFTMYLAASLIYWIMATLLSALQSRLEAHVNRQDQE
>Mature_219_residues
PESMQLVLDSAPFLLKGAWLTLQLSLGGMFLGLLLGFMLAMMRLSHFWPFSLISRFYVSIFRGTPLIAQLFMIYYGLPQF
GIELDPMPAALIGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMTRWQALYRVILPQAGRTALPPLGNSFIGLVKDTS
LAATIQVPELFRQAQLITSRTMEVFTMYLAASLIYWIMATLLSALQSRLEAHVNRQDQE

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=220, Percent_Identity=80, Blast_Score=355, Evalue=1e-99,
Organism=Escherichia coli, GI1787030, Length=201, Percent_Identity=37.3134328358209, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=37.2641509433962, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787087, Length=230, Percent_Identity=30, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1787086, Length=209, Percent_Identity=33.0143540669856, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1788646, Length=219, Percent_Identity=31.0502283105023, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI87082239, Length=201, Percent_Identity=36.318407960199, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1788645, Length=204, Percent_Identity=33.3333333333333, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1786874, Length=229, Percent_Identity=29.2576419213974, Blast_Score=90, Evalue=9e-20,
Organism=Escherichia coli, GI48994930, Length=188, Percent_Identity=34.0425531914894, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24472; Mature: 24341

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPESMQLVLDSAPFLLKGAWLTLQLSLGGMFLGLLLGFMLAMMRLSHFWPFSLISRFYVS
CCCHHHHHHCCCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IFRGTPLIAQLFMIYYGLPQFGIELDPMPAALIGLSLNTAAYTSETLRAAISSIEKGQWE
HHCCCHHHHHHHHHHHCCCHHCCEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHH
AAASIGMTRWQALYRVILPQAGRTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLITS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHEEEEHHHHHHHHHHHHH
RTMEVFTMYLAASLIYWIMATLLSALQSRLEAHVNRQDQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PESMQLVLDSAPFLLKGAWLTLQLSLGGMFLGLLLGFMLAMMRLSHFWPFSLISRFYVS
CCHHHHHHCCCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IFRGTPLIAQLFMIYYGLPQFGIELDPMPAALIGLSLNTAAYTSETLRAAISSIEKGQWE
HHCCCHHHHHHHHHHHCCCHHCCEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHH
AAASIGMTRWQALYRVILPQAGRTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLITS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHEEEEHHHHHHHHHHHHH
RTMEVFTMYLAASLIYWIMATLLSALQSRLEAHVNRQDQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]