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The map label for this gene is ybcY [H]

Identifier: 170024432

GI number: 170024432

Start: 2439260

End: 2439919

Strand: Direct

Name: ybcY [H]

Synonym: YPK_2203

Alternate gene names: 170024432

Gene position: 2439260-2439919 (Clockwise)

Preceding gene: 170024431

Following gene: 170024436

Centisome position: 52.02

GC content: 44.39

Gene sequence:

>660_bases
ATGAACAAATCAACCAAAATAGGTTCCCAAATATATACTCCATTTACCCTGAAGTTATATGACTGGTGGGTATTGAAAAT
GTCCAATCACTTTGCTTGGAAATGCCCTACTCACGACGTTTTAGTACCTCATTTCACTGAATATGCCGGTAATGAACATT
TGGACATAGGCGTAGGGACTGGCTTTTATCTGACACATCTGCCTGAAACTACTCATATCTCTCTGATGGATATCAATACC
AACAGCCTTGCTGTTGCCAGCAATCGCATTGGGTCAACACGGGTCAAGGAATGCATCCAGCATGATGTTTTTGAACCGTT
CCCAGCCCAATACCACGGCTATTTTGACTCAATTTCAATGTTCTATCTGCTGCATTGCCTCCCTGGTGCGCTAAAGGATA
AAGTGCAAGTGATAGCCAATACCGCTATGGGGTTAAAAACGGGTGGCACACTTTATGGCGCGACGATATTAGGCAATGAT
GCAGGGCATAATCGTCTTGGGAAGAAATTGATGAAGGTGTATAACTCAAAAGGTATTTTTTCTAACAAAGACGATACGGA
AGATGGGCTCCATGCCATGCTATCGTCCCAGTTCCGTGATGTTGCAATTACCCGTGTAGGCATGGTCGTGCTTTTTACCG
CAACAGGCCGCCGCGAGTAA

Upstream 100 bases:

>100_bases
TTCCCATGAAATCCATATGGTTATGTGTTTTTTCTATTTGATCTCTACCCCATAGGTTGATTTAATAAGCACCGTAACGA
AATAATAACGGAATATTATT

Downstream 100 bases:

>100_bases
TATATTCACCATGCATTGAATTTTAGCTATGCAGTAAATGTGACACAGCATAAAAAACTGCACTGCCAAATATCAGGGTG
TTATCCAATAATTGGGGTGC

Product: type 12 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MNKSTKIGSQIYTPFTLKLYDWWVLKMSNHFAWKCPTHDVLVPHFTEYAGNEHLDIGVGTGFYLTHLPETTHISLMDINT
NSLAVASNRIGSTRVKECIQHDVFEPFPAQYHGYFDSISMFYLLHCLPGALKDKVQVIANTAMGLKTGGTLYGATILGND
AGHNRLGKKLMKVYNSKGIFSNKDDTEDGLHAMLSSQFRDVAITRVGMVVLFTATGRRE

Sequences:

>Translated_219_residues
MNKSTKIGSQIYTPFTLKLYDWWVLKMSNHFAWKCPTHDVLVPHFTEYAGNEHLDIGVGTGFYLTHLPETTHISLMDINT
NSLAVASNRIGSTRVKECIQHDVFEPFPAQYHGYFDSISMFYLLHCLPGALKDKVQVIANTAMGLKTGGTLYGATILGND
AGHNRLGKKLMKVYNSKGIFSNKDDTEDGLHAMLSSQFRDVAITRVGMVVLFTATGRRE
>Mature_219_residues
MNKSTKIGSQIYTPFTLKLYDWWVLKMSNHFAWKCPTHDVLVPHFTEYAGNEHLDIGVGTGFYLTHLPETTHISLMDINT
NSLAVASNRIGSTRVKECIQHDVFEPFPAQYHGYFDSISMFYLLHCLPGALKDKVQVIANTAMGLKTGGTLYGATILGND
AGHNRLGKKLMKVYNSKGIFSNKDDTEDGLHAMLSSQFRDVAITRVGMVVLFTATGRRE

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR016584 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 24463; Mature: 24463

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSTKIGSQIYTPFTLKLYDWWVLKMSNHFAWKCPTHDVLVPHFTEYAGNEHLDIGVGT
CCCCCCCCCEECCCEEEEEEEEEEEEECCCEEEECCCCCCCCCCHHHHCCCCEEEEECCC
GFYLTHLPETTHISLMDINTNSLAVASNRIGSTRVKECIQHDVFEPFPAQYHGYFDSISM
CEEEEECCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHCCHHHHHHH
FYLLHCLPGALKDKVQVIANTAMGLKTGGTLYGATILGNDAGHNRLGKKLMKVYNSKGIF
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCC
SNKDDTEDGLHAMLSSQFRDVAITRVGMVVLFTATGRRE
CCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCC
>Mature Secondary Structure
MNKSTKIGSQIYTPFTLKLYDWWVLKMSNHFAWKCPTHDVLVPHFTEYAGNEHLDIGVGT
CCCCCCCCCEECCCEEEEEEEEEEEEECCCEEEECCCCCCCCCCHHHHCCCCEEEEECCC
GFYLTHLPETTHISLMDINTNSLAVASNRIGSTRVKECIQHDVFEPFPAQYHGYFDSISM
CEEEEECCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHCCHHHHHHH
FYLLHCLPGALKDKVQVIANTAMGLKTGGTLYGATILGNDAGHNRLGKKLMKVYNSKGIF
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCCC
SNKDDTEDGLHAMLSSQFRDVAITRVGMVVLFTATGRRE
CCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]