| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024429
Identifier: 170024429
GI number: 170024429
Start: 2436266
End: 2437198
Strand: Direct
Name: 170024429
Synonym: YPK_2198
Alternate gene names: NA
Gene position: 2436266-2437198 (Clockwise)
Preceding gene: 170024428
Following gene: 170024430
Centisome position: 51.95
GC content: 40.62
Gene sequence:
>933_bases ATGGCTGTCAAAGTGGACGTGAAAGAAAATACACTCATCACACTGAATGAATTTGTGTCATTTCTTGAAACGAGTGGAAC TATTGAAAAGCTTAGAAATTCAATCTACTCATCCGAAGTAATGAGTTGTGTTGCCACTCAGTTGCGTGCATTAGCGGCCA ATAAGGCGCATATTTTTTCTATTATCATTGAAGAGTTGGAGAAAACAGACCACTTTCAATCACAAAATTACGGGCAAGCT CAAGGATTTGTTCTTTATACAACACCGTGGTATACAATCCGGCTAATGCTGTGGATCCCACCCGGACATCAGGCCAGCGC TATTCCCTTTTCTTACAAGGTCGCACATGACCATGCTTTTGACCTGATGACCGTAGGCTTCTTCGGCCCTGGTTATCGCA CATCACTGTACGAATTTGATTACAATGAGCCCATTCAACGTACTGATGGACTTACCCAGCTCAGTTATAAAGGGGAAATG TATCTGCGAGAAAATGAAGTTATCTATTATTTTGCTAATAAAGATGTGCATATACAACACGAACCAGAGTCACTTTCGGT TTCATTAAATTTAATCATTAATAAACCAGATGCGTCTGCCCGACAAACTGTTTTCGATATTGAATCTACAGATGAAGGTA GCAATTTATGTTGGGGAAAACCCCACTTTAACAGTATTGAAAAAATAGCTTCCCAGCGCTCAATTTTTTCAGCGCTATCA ACCCATGGGAATATGAGATCAAAAAAAGCTATCGAAAAGATCGCACACAATCATAAAGCTGATGAAGTTCGCGCCCTGTC TTGGGTAGCAATGTTACGTGCAAATGATACCGTATTAAGCGATGTGCTCACACTAGAGAAAAGTCATTATGTCAGGCGTG TACTTGCCGAGATAAACATGGCGCAAGGAGAAACTAGCAATGCTCCTAAATAA
Upstream 100 bases:
>100_bases TCGACTATTTGGTGAAGAATGACTCTGACGCTCAAATAATTGAGGCCGCAGAACAGAGCCTTGCAATAAATAAAGCAGAA GAGTCAGAGGTGTAAATATT
Downstream 100 bases:
>100_bases TATTACGCCAGTGAATAAATCACTGACACTACAAGATTTATTAGGAATTTTGAGTCACTCATCGGCAATTTCCAATGTGG CAAATGGGATTTATGTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MAVKVDVKENTLITLNEFVSFLETSGTIEKLRNSIYSSEVMSCVATQLRALAANKAHIFSIIIEELEKTDHFQSQNYGQA QGFVLYTTPWYTIRLMLWIPPGHQASAIPFSYKVAHDHAFDLMTVGFFGPGYRTSLYEFDYNEPIQRTDGLTQLSYKGEM YLRENEVIYYFANKDVHIQHEPESLSVSLNLIINKPDASARQTVFDIESTDEGSNLCWGKPHFNSIEKIASQRSIFSALS THGNMRSKKAIEKIAHNHKADEVRALSWVAMLRANDTVLSDVLTLEKSHYVRRVLAEINMAQGETSNAPK
Sequences:
>Translated_310_residues MAVKVDVKENTLITLNEFVSFLETSGTIEKLRNSIYSSEVMSCVATQLRALAANKAHIFSIIIEELEKTDHFQSQNYGQA QGFVLYTTPWYTIRLMLWIPPGHQASAIPFSYKVAHDHAFDLMTVGFFGPGYRTSLYEFDYNEPIQRTDGLTQLSYKGEM YLRENEVIYYFANKDVHIQHEPESLSVSLNLIINKPDASARQTVFDIESTDEGSNLCWGKPHFNSIEKIASQRSIFSALS THGNMRSKKAIEKIAHNHKADEVRALSWVAMLRANDTVLSDVLTLEKSHYVRRVLAEINMAQGETSNAPK >Mature_309_residues AVKVDVKENTLITLNEFVSFLETSGTIEKLRNSIYSSEVMSCVATQLRALAANKAHIFSIIIEELEKTDHFQSQNYGQAQ GFVLYTTPWYTIRLMLWIPPGHQASAIPFSYKVAHDHAFDLMTVGFFGPGYRTSLYEFDYNEPIQRTDGLTQLSYKGEMY LRENEVIYYFANKDVHIQHEPESLSVSLNLIINKPDASARQTVFDIESTDEGSNLCWGKPHFNSIEKIASQRSIFSALST HGNMRSKKAIEKIAHNHKADEVRALSWVAMLRANDTVLSDVLTLEKSHYVRRVLAEINMAQGETSNAPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35163; Mature: 35032
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKVDVKENTLITLNEFVSFLETSGTIEKLRNSIYSSEVMSCVATQLRALAANKAHIFS CEEEEEECCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH IIIEELEKTDHFQSQNYGQAQGFVLYTTPWYTIRLMLWIPPGHQASAIPFSYKVAHDHAF HHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCCCCEEEEECCCCCC DLMTVGFFGPGYRTSLYEFDYNEPIQRTDGLTQLSYKGEMYLRENEVIYYFANKDVHIQH CEEEEEECCCCCCCEEEEECCCCCHHHCCCCEEEEECCCEEEEECCEEEEEECCCEEEEE EPESLSVSLNLIINKPDASARQTVFDIESTDEGSNLCWGKPHFNSIEKIASQRSIFSALS CCCEEEEEEEEEEECCCCCHHHEEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHH THGNMRSKKAIEKIAHNHKADEVRALSWVAMLRANDTVLSDVLTLEKSHYVRRVLAEINM HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AQGETSNAPK CCCCCCCCCC >Mature Secondary Structure AVKVDVKENTLITLNEFVSFLETSGTIEKLRNSIYSSEVMSCVATQLRALAANKAHIFS EEEEEECCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH IIIEELEKTDHFQSQNYGQAQGFVLYTTPWYTIRLMLWIPPGHQASAIPFSYKVAHDHAF HHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCCCCEEEEECCCCCC DLMTVGFFGPGYRTSLYEFDYNEPIQRTDGLTQLSYKGEMYLRENEVIYYFANKDVHIQH CEEEEEECCCCCCCEEEEECCCCCHHHCCCCEEEEECCCEEEEECCEEEEEECCCEEEEE EPESLSVSLNLIINKPDASARQTVFDIESTDEGSNLCWGKPHFNSIEKIASQRSIFSALS CCCEEEEEEEEEEECCCCCHHHEEEEECCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHH THGNMRSKKAIEKIAHNHKADEVRALSWVAMLRANDTVLSDVLTLEKSHYVRRVLAEINM HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH AQGETSNAPK CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA