| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is 170024419
Identifier: 170024419
GI number: 170024419
Start: 2426005
End: 2426847
Strand: Direct
Name: 170024419
Synonym: YPK_2188
Alternate gene names: NA
Gene position: 2426005-2426847 (Clockwise)
Preceding gene: 170024418
Following gene: 170024423
Centisome position: 51.73
GC content: 46.14
Gene sequence:
>843_bases ATGCGTTTCTTTTTTCTGTTTACACTGGCTGTAGTGATTTCTGTTAGTGCTGTAACGAATTCACACGCAGCCAATAGTGC CGAACGTCGCTGTGGCTGGTTTGAAAACCCGACTCCAGCTAATGCTACGCTGACTGATCGTGATGGCATGTGGGAAATCG GCACTCAAGGCGGCTATCAGGCGAAAGGTGACTGGCCTGGATTTAGTCCTGCCCAATGGGTTCGTACCGGGAATGGAAAC TATGGTTATGGCTGTGCCTGCATCACTGCGGATACAGACCCCACGGCACAGCGCATGAATAATCTGACTAAAGCAACGGC TCGTCCTCTAAGTGCCTGCCGTACAGATAAATCACTCAAAGAACCAGAAAATCCGTTAGCAGAGATGCGACAGATAGCCT TATATCAGGGCAATGGTTTCAGCTTCAGTTATCCAAGCACTTGGTCAGTCAAAAAAGAAAAGCAATGCGTCAGTCTCAAT CAGCCAGAACGGGTGACTGAGGAAGAATACACGTTAAATATTTGTGTTCAGCATGGCACTCTGGAACAGGCGACAGACAG TATGATTTTTTATAACGATAACGGTGTCTGGATGCGGGAAGCGGGAATGGATGCCCCTAGCCCTGTCGATATAATTAAAG GGCCAGGCTGGAAAGGGATGCAGACTACGCAGACGTGTGGCGTCAGCGATGAAGAAACTGGTTTTCATGCCGCGGGTGGC ACCTGTTTTATGGCAATTGTTTATGATGCTAAGACACAATTATTGTTTGATACGGTTGGTTTTTATCATAATTTTGATGT CATCAACATGATTGTTCAGTCTGTTAAATTTACCGAAAAATAA
Upstream 100 bases:
>100_bases TTTGTTGTCTCATGGGGTTTCGCTGAATCTCATGAGAATTGAAAAATGCTATAAAATCCACGCAATTGCGTGGATTTTTG TTTTCATATAAGGATATTTC
Downstream 100 bases:
>100_bases TGTTTATGCTGCAATAATAAGCCGTGAAAGTTTTTTTGTTTTCATAACATCTTAGGTGGTAAGCGAATCGCCACGCGGCA TGAGTAAAAAATTTAGTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MRFFFLFTLAVVISVSAVTNSHAANSAERRCGWFENPTPANATLTDRDGMWEIGTQGGYQAKGDWPGFSPAQWVRTGNGN YGYGCACITADTDPTAQRMNNLTKATARPLSACRTDKSLKEPENPLAEMRQIALYQGNGFSFSYPSTWSVKKEKQCVSLN QPERVTEEEYTLNICVQHGTLEQATDSMIFYNDNGVWMREAGMDAPSPVDIIKGPGWKGMQTTQTCGVSDEETGFHAAGG TCFMAIVYDAKTQLLFDTVGFYHNFDVINMIVQSVKFTEK
Sequences:
>Translated_280_residues MRFFFLFTLAVVISVSAVTNSHAANSAERRCGWFENPTPANATLTDRDGMWEIGTQGGYQAKGDWPGFSPAQWVRTGNGN YGYGCACITADTDPTAQRMNNLTKATARPLSACRTDKSLKEPENPLAEMRQIALYQGNGFSFSYPSTWSVKKEKQCVSLN QPERVTEEEYTLNICVQHGTLEQATDSMIFYNDNGVWMREAGMDAPSPVDIIKGPGWKGMQTTQTCGVSDEETGFHAAGG TCFMAIVYDAKTQLLFDTVGFYHNFDVINMIVQSVKFTEK >Mature_280_residues MRFFFLFTLAVVISVSAVTNSHAANSAERRCGWFENPTPANATLTDRDGMWEIGTQGGYQAKGDWPGFSPAQWVRTGNGN YGYGCACITADTDPTAQRMNNLTKATARPLSACRTDKSLKEPENPLAEMRQIALYQGNGFSFSYPSTWSVKKEKQCVSLN QPERVTEEEYTLNICVQHGTLEQATDSMIFYNDNGVWMREAGMDAPSPVDIIKGPGWKGMQTTQTCGVSDEETGFHAAGG TCFMAIVYDAKTQLLFDTVGFYHNFDVINMIVQSVKFTEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30997; Mature: 30997
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFFFLFTLAVVISVSAVTNSHAANSAERRCGWFENPTPANATLTDRDGMWEIGTQGGYQ CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEECCCCCEEECCCCCCC AKGDWPGFSPAQWVRTGNGNYGYGCACITADTDPTAQRMNNLTKATARPLSACRTDKSLK CCCCCCCCCHHHHEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHC EPENPLAEMRQIALYQGNGFSFSYPSTWSVKKEKQCVSLNQPERVTEEEYTLNICVQHGT CCCCHHHHHHHEEEEECCCEEECCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEEECCC LEQATDSMIFYNDNGVWMREAGMDAPSPVDIIKGPGWKGMQTTQTCGVSDEETGFHAAGG HHHCCCCEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCHHCCCCCCCCCCEECCCC TCFMAIVYDAKTQLLFDTVGFYHNFDVINMIVQSVKFTEK EEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MRFFFLFTLAVVISVSAVTNSHAANSAERRCGWFENPTPANATLTDRDGMWEIGTQGGYQ CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCEEECCCCCEEECCCCCCC AKGDWPGFSPAQWVRTGNGNYGYGCACITADTDPTAQRMNNLTKATARPLSACRTDKSLK CCCCCCCCCHHHHEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHC EPENPLAEMRQIALYQGNGFSFSYPSTWSVKKEKQCVSLNQPERVTEEEYTLNICVQHGT CCCCHHHHHHHEEEEECCCEEECCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEEEEECCC LEQATDSMIFYNDNGVWMREAGMDAPSPVDIIKGPGWKGMQTTQTCGVSDEETGFHAAGG HHHCCCCEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCHHCCCCCCCCCCEECCCC TCFMAIVYDAKTQLLFDTVGFYHNFDVINMIVQSVKFTEK EEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA