| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yecE [H]
Identifier: 170024383
GI number: 170024383
Start: 2380839
End: 2381654
Strand: Direct
Name: yecE [H]
Synonym: YPK_2149
Alternate gene names: 170024383
Gene position: 2380839-2381654 (Clockwise)
Preceding gene: 170024376
Following gene: 170024384
Centisome position: 50.77
GC content: 51.1
Gene sequence:
>816_bases ATGTATATCGGACTGCCGCAATGGCAACACCCGGCCTGGGGCCGACTGGGTCTTCGAGACTTGGCGGACTATAGCCGCTA TTTTAATTGCGTTGAGGGTAATACCACCTTTTATGCATTGCCACGGCCAGAAATTGTGCTGCGCTGGCGTGATATGACAC CGGACAGTTTCCGTTTCTGCTTTAAATTCCCCGCCACAATCAGCCATCAGGCGGCTCTGCGTGACTGTGATAAAGAACTA CAGGCTTTTTATCATTGCCTGGCTCCGCTGAATGATCGCATTGGTCAACTGTGGTTACAACTGCCTGCCGCCTTTGGGCC AAATGAATTGGACCGTTTGTGGCAGTTTATCGATAAGTTACCCGCTGGTTTTCATTATGGCGTGGAAGTCCGACACCCAG AGTTTTTTGCCAAAGGTGCCGCAGAATTAGCCCTTAATCAAGGGTTACATCAGCGTTCAATTAATCGGGTGATGCTCGAT AGCCGCCCTATTCACGCCGCCAAGCCTTTAACCGCCGCCGTTCGTGATGCTCAAAGTAAGAAACCCCGTTTGCCAGTACA TGCTGTCGTCACTGGCGGCCAACCTTTAGTGCGCTTTATTGGTGGCGACCAATTGGATGACAACTTGGCCCTGTTTGCAC CCTGGCTACAAAAACTGCCTTTATGGGAACAGCACCATCAACCCTACGTTTTTATTCACACGCCCGATAACGGCGACTCA CCGCAGCAAGCTCAAAAAATTTGGCAAAAGTTGGCAGAAGCCATCCCGACATTGCCCACCGCACCCGATTGGCCAGAGCA AGAGACACTCTTTTAG
Upstream 100 bases:
>100_bases GGCAGCAAACGAACGCGTCCCGATGAGCTTACATCAGTAAGTGATTCGGGTGAGAGAGAGCAGCTAACAACGCTGTAGCG TCAAGTAAGAAGGGTAAAAG
Downstream 100 bases:
>100_bases TCACTTCAGCGTGTTAGTCACATCAGTGAGGAGTGCGCATAATCGTGCTCTCAGCCTTATCTTTTCGCGCTGCAAATTAA GAGTCAATAAATGATAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MYIGLPQWQHPAWGRLGLRDLADYSRYFNCVEGNTTFYALPRPEIVLRWRDMTPDSFRFCFKFPATISHQAALRDCDKEL QAFYHCLAPLNDRIGQLWLQLPAAFGPNELDRLWQFIDKLPAGFHYGVEVRHPEFFAKGAAELALNQGLHQRSINRVMLD SRPIHAAKPLTAAVRDAQSKKPRLPVHAVVTGGQPLVRFIGGDQLDDNLALFAPWLQKLPLWEQHHQPYVFIHTPDNGDS PQQAQKIWQKLAEAIPTLPTAPDWPEQETLF
Sequences:
>Translated_271_residues MYIGLPQWQHPAWGRLGLRDLADYSRYFNCVEGNTTFYALPRPEIVLRWRDMTPDSFRFCFKFPATISHQAALRDCDKEL QAFYHCLAPLNDRIGQLWLQLPAAFGPNELDRLWQFIDKLPAGFHYGVEVRHPEFFAKGAAELALNQGLHQRSINRVMLD SRPIHAAKPLTAAVRDAQSKKPRLPVHAVVTGGQPLVRFIGGDQLDDNLALFAPWLQKLPLWEQHHQPYVFIHTPDNGDS PQQAQKIWQKLAEAIPTLPTAPDWPEQETLF >Mature_271_residues MYIGLPQWQHPAWGRLGLRDLADYSRYFNCVEGNTTFYALPRPEIVLRWRDMTPDSFRFCFKFPATISHQAALRDCDKEL QAFYHCLAPLNDRIGQLWLQLPAAFGPNELDRLWQFIDKLPAGFHYGVEVRHPEFFAKGAAELALNQGLHQRSINRVMLD SRPIHAAKPLTAAVRDAQSKKPRLPVHAVVTGGQPLVRFIGGDQLDDNLALFAPWLQKLPLWEQHHQPYVFIHTPDNGDS PQQAQKIWQKLAEAIPTLPTAPDWPEQETLF
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0759 family [H]
Homologues:
Organism=Escherichia coli, GI1788175, Length=271, Percent_Identity=60.1476014760148, Blast_Score=357, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002763 [H]
Pfam domain/function: PF01904 DUF72 [H]
EC number: NA
Molecular weight: Translated: 31075; Mature: 31075
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIGLPQWQHPAWGRLGLRDLADYSRYFNCVEGNTTFYALPRPEIVLRWRDMTPDSFRFC CCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCEEEEECCCCEEEEEECCCCCCHHEEE FKFPATISHQAALRDCDKELQAFYHCLAPLNDRIGQLWLQLPAAFGPNELDRLWQFIDKL EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC PAGFHYGVEVRHPEFFAKGAAELALNQGLHQRSINRVMLDSRPIHAAKPLTAAVRDAQSK CCCCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC KPRLPVHAVVTGGQPLVRFIGGDQLDDNLALFAPWLQKLPLWEQHHQPYVFIHTPDNGDS CCCCCEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHCCCCEEEEECCCCCCC PQQAQKIWQKLAEAIPTLPTAPDWPEQETLF HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYIGLPQWQHPAWGRLGLRDLADYSRYFNCVEGNTTFYALPRPEIVLRWRDMTPDSFRFC CCCCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCEEEEECCCCEEEEEECCCCCCHHEEE FKFPATISHQAALRDCDKELQAFYHCLAPLNDRIGQLWLQLPAAFGPNELDRLWQFIDKL EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC PAGFHYGVEVRHPEFFAKGAAELALNQGLHQRSINRVMLDSRPIHAAKPLTAAVRDAQSK CCCCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC KPRLPVHAVVTGGQPLVRFIGGDQLDDNLALFAPWLQKLPLWEQHHQPYVFIHTPDNGDS CCCCCEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHCCCCEEEEECCCCCCC PQQAQKIWQKLAEAIPTLPTAPDWPEQETLF HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]