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The map label for this gene is ychJ [C]

Identifier: 170024314

GI number: 170024314

Start: 2310592

End: 2311056

Strand: Direct

Name: ychJ [C]

Synonym: YPK_2079

Alternate gene names: 170024314

Gene position: 2310592-2311056 (Clockwise)

Preceding gene: 170024309

Following gene: 170024315

Centisome position: 49.27

GC content: 47.31

Gene sequence:

>465_bases
TTGTCAGAACTGTGTCCTTGTGGCAGCATCCTTAATTACCACGAATGCTGCGGCCCCTACATCCTCGGCACTCAGGTTGC
AGCAAAACCGGCAATATTGATGCGCTCGCGCTATTGTGCTTATGTAGAAAAAAATGTGGATTATCTGATTGCTACCTGGC
ATCCAGACTGTCATGCACAGGAGTGGCGAGAAAGTATCATTCAAGGCTTTACCAAGACGGTGTGGCATGGGCTAACAGTT
ATTGCTGAGACTCCTGGTCGCCATCCTGATGAAGCTTTTGTGGAGTTTATTGCCCGTTTCACCGATGCAGATAATGCACA
GATAACGGCAATGCACGAACGTTCTCGCTTCCTACGTATAAAAGAACACTGGTACTATATTGACGGTATCCGCCCCTCTT
TGGGTAGAAACGATACATGTCTTTGCGGTTCGGGGAAAAAACACAAGAAATGCTGTGGCCGTTAA

Upstream 100 bases:

>100_bases
AGGTAAGATAGGCGTACATTGAGTACCACCATCCTATATAGCCCTACTCTGTAGTGATACGATAAGAGCGAGTGGCCTTG
CTGATTATTCTGGAGAAATT

Downstream 100 bases:

>100_bases
TTAAACTATTTCTTTATTGTTACTCCTAAAATATCAGACACTTACACAACATGAAATAATGTTAAGACAGGATTTACCAC
CTTATGCCACACCAGAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MSELCPCGSILNYHECCGPYILGTQVAAKPAILMRSRYCAYVEKNVDYLIATWHPDCHAQEWRESIIQGFTKTVWHGLTV
IAETPGRHPDEAFVEFIARFTDADNAQITAMHERSRFLRIKEHWYYIDGIRPSLGRNDTCLCGSGKKHKKCCGR

Sequences:

>Translated_154_residues
MSELCPCGSILNYHECCGPYILGTQVAAKPAILMRSRYCAYVEKNVDYLIATWHPDCHAQEWRESIIQGFTKTVWHGLTV
IAETPGRHPDEAFVEFIARFTDADNAQITAMHERSRFLRIKEHWYYIDGIRPSLGRNDTCLCGSGKKHKKCCGR
>Mature_153_residues
SELCPCGSILNYHECCGPYILGTQVAAKPAILMRSRYCAYVEKNVDYLIATWHPDCHAQEWRESIIQGFTKTVWHGLTVI
AETPGRHPDEAFVEFIARFTDADNAQITAMHERSRFLRIKEHWYYIDGIRPSLGRNDTCLCGSGKKHKKCCGR

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family

Homologues:

Organism=Escherichia coli, GI1787484, Length=154, Percent_Identity=53.8961038961039, Blast_Score=171, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1530_YERPA (Q1C7S6)

Other databases:

- EMBL:   CP000308
- RefSeq:   YP_651441.1
- ProteinModelPortal:   Q1C7S6
- SMR:   Q1C7S6
- STRING:   Q1C7S6
- GeneID:   4120224
- GenomeReviews:   CP000308_GR
- KEGG:   ypa:YPA_1530
- eggNOG:   COG3012
- HOGENOM:   HBG609508
- OMA:   FTARWHD
- ProtClustDB:   PRK01617
- BioCyc:   YPES360102:YPA_1530-MONOMER
- HAMAP:   MF_00612
- InterPro:   IPR004027
- InterPro:   IPR023006

Pfam domain/function: PF02810 SEC-C

EC number: NA

Molecular weight: Translated: 17623; Mature: 17492

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELCPCGSILNYHECCGPYILGTQVAAKPAILMRSRYCAYVEKNVDYLIATWHPDCHAQ
CCCCCCCCCCCCHHHHCCCEEECCHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHH
EWRESIIQGFTKTVWHGLTVIAETPGRHPDEAFVEFIARFTDADNAQITAMHERSRFLRI
HHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHEEH
KEHWYYIDGIRPSLGRNDTCLCGSGKKHKKCCGR
HCCEEEECCCCCCCCCCCEEEECCCCCHHHHCCC
>Mature Secondary Structure 
SELCPCGSILNYHECCGPYILGTQVAAKPAILMRSRYCAYVEKNVDYLIATWHPDCHAQ
CCCCCCCCCCCHHHHCCCEEECCHHHHCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHH
EWRESIIQGFTKTVWHGLTVIAETPGRHPDEAFVEFIARFTDADNAQITAMHERSRFLRI
HHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHEEH
KEHWYYIDGIRPSLGRNDTCLCGSGKKHKKCCGR
HCCEEEECCCCCCCCCCCEEEECCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA