Click here to switch to the map view.

The map label for this gene is arnE [H]

Identifier: 170024075

GI number: 170024075

Start: 2036509

End: 2036853

Strand: Direct

Name: arnE [H]

Synonym: YPK_1836

Alternate gene names: 170024075

Gene position: 2036509-2036853 (Clockwise)

Preceding gene: 170024074

Following gene: 170024076

Centisome position: 43.43

GC content: 50.14

Gene sequence:

>345_bases
ATGAACAGCTACCTACTCTTGCCGATGGTCAGTCTATTAACCTGTATTGGGCAATTATGTCAAAAACAGGCTGCGCAGTG
TTGGGAGCAACCGCAGGCCCGGCGGTTGAATCTGACATTGCGTTGGTTGGCGATAGCTGTAGTGTCACTTGGCTTGGGGA
TGCTGTTGTGGCTGCGGTTATTGCAGCAACTCCCGCTGAGCGTGGCCTATCCTATGCTCAGCTTTAATTTTGTGTTGGTT
ACCTTGGCGGCACAACTATTTTACGGTGAAAAGGCCACTCTTCGGCATTGGTTGGGGGTTGCCGCTATTATGTTCGGTAT
CTTGCTAATGAGTTGGCACCTATGA

Upstream 100 bases:

>100_bases
TGCAATTAGCCAGAAATGAAGCACTCCCGGCCCATCTGCCGTCAGCGGATAAGGTGAATTTAATGAATCGACTCGCCCTG
TTGTGGTACCAGAAAACACC

Downstream 100 bases:

>100_bases
AAGGGTATCTGTGGGGGGGGGCAAGCGTCGTATTGGTCACGGTGGCACAGTTGGTGTTGAAGTGGGGTATGATGAATATT
CCATTATTATCACTAGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnE; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnE [H]

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MNSYLLLPMVSLLTCIGQLCQKQAAQCWEQPQARRLNLTLRWLAIAVVSLGLGMLLWLRLLQQLPLSVAYPMLSFNFVLV
TLAAQLFYGEKATLRHWLGVAAIMFGILLMSWHL

Sequences:

>Translated_114_residues
MNSYLLLPMVSLLTCIGQLCQKQAAQCWEQPQARRLNLTLRWLAIAVVSLGLGMLLWLRLLQQLPLSVAYPMLSFNFVLV
TLAAQLFYGEKATLRHWLGVAAIMFGILLMSWHL
>Mature_114_residues
MNSYLLLPMVSLLTCIGQLCQKQAAQCWEQPQARRLNLTLRWLAIAVVSLGLGMLLWLRLLQQLPLSVAYPMLSFNFVLV
TLAAQLFYGEKATLRHWLGVAAIMFGILLMSWHL

Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane [H]

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI87082074, Length=108, Percent_Identity=50, Blast_Score=83, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620
- InterPro:   IPR022883 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 12944; Mature: 12944

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSYLLLPMVSLLTCIGQLCQKQAAQCWEQPQARRLNLTLRWLAIAVVSLGLGMLLWLRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQQLPLSVAYPMLSFNFVLVTLAAQLFYGEKATLRHWLGVAAIMFGILLMSWHL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSYLLLPMVSLLTCIGQLCQKQAAQCWEQPQARRLNLTLRWLAIAVVSLGLGMLLWLRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQQLPLSVAYPMLSFNFVLVTLAAQLFYGEKATLRHWLGVAAIMFGILLMSWHL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA