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The map label for this gene is 170023713

Identifier: 170023713

GI number: 170023713

Start: 1625937

End: 1626962

Strand: Reverse

Name: 170023713

Synonym: YPK_1472

Alternate gene names: NA

Gene position: 1626962-1625937 (Counterclockwise)

Preceding gene: 170023714

Following gene: 170023712

Centisome position: 34.69

GC content: 53.9

Gene sequence:

>1026_bases
ATGTTGCCCGATGAATCCGTTCACCAGGAAAAACATGCCAATCTGGACGCCTGGTATCAGGAGTCTCAGCCATGGAACGC
CGGTTTTATCAGCATGATGCGGGCGAATGCCGCCCGCACCCCTACCCTGCCAGCGCCAGGAAAAGCGCCCTTGCCTGAAC
AGGAAGCCTTCCGCATCGGGCAAAGTGCGCACATGACGTTCTCTCCGCGTGAGATATCTCATGCGGTTATGAAAGACGGG
AAAATGGATCTGCAACTTTTTGGCTTAGGGATTTGGGGGCCAAATGGTGCGATGCCGCTTCAGATGACCGAACTGGCCTA
TACCCGTGCCGAGTTGCATGATCATACGATGACGGACTTCGTCGACCTTTTTCATCACCGCGCATTATCACAGCTTTATC
GGGCGTGGTTTGTCTCTCAGGATACCGCCTCGCTAGACCGGCAGAGTGATGAAAAATTCTCCTTCTATGTCGGTAGTCTG
GCCGGGCTGGATCCTCAAGAACTTAATGACACCGAACTCCCGGTTCATGCCCGGTTAGCCTCCTCTGCCCATTTGATTCG
TGAAGCGCGCAACCCCGAAGGGCTCGTGGGCGCATTGCAGTATTACTTTGACGTCCCCGTGCGGATGGTGGAGTACGCCG
AGCAGTGGATCTTTCTGGAAGAAAGCGACCAGACACAATTGGGTGATGGTGCCGGCGCGATGCTCTTGGGCGACGGTGCT
ATTTTGGGCAATACCGTTTTGGATCGGCAGCATAAATTTCAACTGATCCTCGGCCCCCTCAGCCTGCAACAGTACCTGCG
CTTTAGCCTCTGGGGACAAGACTTACCAGTATTGCGAGAGTGGGTACGTAACTTTGTTGGGTTCGAATACGCCTGGGAAG
TCCAGTTGTTGTTAAGCGCCGATGAGGTTCCCATGGCAACACTCGATGGCGGACATCAATTGGGATACACCTCTTGGTTA
GCCCGCAGTGATACCACCCTTGATGTCGGTGGGATGAGTTTTGAGCCTGAAATGCATCACGATTAA

Upstream 100 bases:

>100_bases
ATGCCGCAATAAATGTGTTTACCGAGACCGAGCTAAACTCCATGCAAAGAGGACGTGTCGGTCACTGGAAAGCCCGCCCT
GGCAGACGAGGAGTCCTGTA

Downstream 100 bases:

>100_bases
TTAATGCATCGCTCTTAATCAATAATCTTCATGGCCAATGTGCTGGCAGCAGAAAAAACAGACAACGACGTCCACCCATG
GCGTTAAAAGGAACAAACAT

Product: type VI secretion protein

Products: NA

Alternate protein names: Cytoplasmic Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein ImpH; Type VI Secretion System Protein; T6ss R; Type VI Secretion System Core Protein; Type VI Secretion System Protein EvpG; Conserved Protein; Secreted Protein; Cytoplasmic Protein SciB

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MLPDESVHQEKHANLDAWYQESQPWNAGFISMMRANAARTPTLPAPGKAPLPEQEAFRIGQSAHMTFSPREISHAVMKDG
KMDLQLFGLGIWGPNGAMPLQMTELAYTRAELHDHTMTDFVDLFHHRALSQLYRAWFVSQDTASLDRQSDEKFSFYVGSL
AGLDPQELNDTELPVHARLASSAHLIREARNPEGLVGALQYYFDVPVRMVEYAEQWIFLEESDQTQLGDGAGAMLLGDGA
ILGNTVLDRQHKFQLILGPLSLQQYLRFSLWGQDLPVLREWVRNFVGFEYAWEVQLLLSADEVPMATLDGGHQLGYTSWL
ARSDTTLDVGGMSFEPEMHHD

Sequences:

>Translated_341_residues
MLPDESVHQEKHANLDAWYQESQPWNAGFISMMRANAARTPTLPAPGKAPLPEQEAFRIGQSAHMTFSPREISHAVMKDG
KMDLQLFGLGIWGPNGAMPLQMTELAYTRAELHDHTMTDFVDLFHHRALSQLYRAWFVSQDTASLDRQSDEKFSFYVGSL
AGLDPQELNDTELPVHARLASSAHLIREARNPEGLVGALQYYFDVPVRMVEYAEQWIFLEESDQTQLGDGAGAMLLGDGA
ILGNTVLDRQHKFQLILGPLSLQQYLRFSLWGQDLPVLREWVRNFVGFEYAWEVQLLLSADEVPMATLDGGHQLGYTSWL
ARSDTTLDVGGMSFEPEMHHD
>Mature_341_residues
MLPDESVHQEKHANLDAWYQESQPWNAGFISMMRANAARTPTLPAPGKAPLPEQEAFRIGQSAHMTFSPREISHAVMKDG
KMDLQLFGLGIWGPNGAMPLQMTELAYTRAELHDHTMTDFVDLFHHRALSQLYRAWFVSQDTASLDRQSDEKFSFYVGSL
AGLDPQELNDTELPVHARLASSAHLIREARNPEGLVGALQYYFDVPVRMVEYAEQWIFLEESDQTQLGDGAGAMLLGDGA
ILGNTVLDRQHKFQLILGPLSLQQYLRFSLWGQDLPVLREWVRNFVGFEYAWEVQLLLSADEVPMATLDGGHQLGYTSWL
ARSDTTLDVGGMSFEPEMHHD

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38447; Mature: 38447

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPDESVHQEKHANLDAWYQESQPWNAGFISMMRANAARTPTLPAPGKAPLPEQEAFRIG
CCCCHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCC
QSAHMTFSPREISHAVMKDGKMDLQLFGLGIWGPNGAMPLQMTELAYTRAELHDHTMTDF
CCCCEEECHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHH
VDLFHHRALSQLYRAWFVSQDTASLDRQSDEKFSFYVGSLAGLDPQELNDTELPVHARLA
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEHHHCCCCHHHCCCCCCCHHHHHH
SSAHLIREARNPEGLVGALQYYFDVPVRMVEYAEQWIFLEESDQTQLGDGAGAMLLGDGA
HHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCC
ILGNTVLDRQHKFQLILGPLSLQQYLRFSLWGQDLPVLREWVRNFVGFEYAWEVQLLLSA
EECCHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEEEEEC
DEVPMATLDGGHQLGYTSWLARSDTTLDVGGMSFEPEMHHD
CCCCEEECCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MLPDESVHQEKHANLDAWYQESQPWNAGFISMMRANAARTPTLPAPGKAPLPEQEAFRIG
CCCCHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCC
QSAHMTFSPREISHAVMKDGKMDLQLFGLGIWGPNGAMPLQMTELAYTRAELHDHTMTDF
CCCCEEECHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHH
VDLFHHRALSQLYRAWFVSQDTASLDRQSDEKFSFYVGSLAGLDPQELNDTELPVHARLA
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEHHHCCCCHHHCCCCCCCHHHHHH
SSAHLIREARNPEGLVGALQYYFDVPVRMVEYAEQWIFLEESDQTQLGDGAGAMLLGDGA
HHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCC
ILGNTVLDRQHKFQLILGPLSLQQYLRFSLWGQDLPVLREWVRNFVGFEYAWEVQLLLSA
EECCHHHCCCCCEEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEEEEEC
DEVPMATLDGGHQLGYTSWLARSDTTLDVGGMSFEPEMHHD
CCCCEEECCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA