| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is yfgM [H]
Identifier: 170023541
GI number: 170023541
Start: 1425194
End: 1425829
Strand: Direct
Name: yfgM [H]
Synonym: YPK_1295
Alternate gene names: 170023541
Gene position: 1425194-1425829 (Clockwise)
Preceding gene: 170023540
Following gene: 170023542
Centisome position: 30.39
GC content: 46.86
Gene sequence:
>636_bases GTGGAAGTCTATACCACTGAAAATGACCAGGTTGATGCAGTGCGCCGTTTCTTTAGTGAAAATGGTAAAGCACTGGCCGT GGGTGTGGTGCTCGGGATTGGTGCATTAGTGGGTTGGCGTTATTGGCAGGGTAATCAGAATACTGTCATGACGGAAGCCT CCTCTGCCTATCAGAAAGTCAGTACTGCTCTGTCAACTAACAGTGCGGGTAATGTTAGTGCTGATAGCATTGCTCTCGCT GAAAAGTTTGTTCAGAGCAATAAAAATAACTACGGCGTACTCGTCGGGTTAGAACTGGCTCATGATTTTGTTGAACAAAA TGCATTCGATAAAGCGGCACAGCAACTCAGTCAAGCCTTGGGCCAGACGAAAGATGAAAATCTGTTGTCGCTGATTAATC TGCGCCTTGCGCGTGTGCAACTGCAACTGAAAAAACCCGATGAAGCATTGAAAACGCTGGATGCAGTACAAGGTGATGGC TGGACAGCGATGGCTCAAGATGTTCGTGGCGATGCATTATTAAGCAAAGGTGATACCGCAGGTGCGCGCGCTGCTTATAG TAAAGCTATCGAATCTAATGCTTCTCAGGCGCTGCAAGCATTGTTGCGTATGAAACTGAATAACTTGTCCAGCTAA
Upstream 100 bases:
>100_bases GTCGTTGTAAAAGATCTGCGAAATGGTGAACAAGAAACGCTGGCGCAAGCGGATGTTGCTGCGCGTCTGGCTTTGATGTT GGGTTAAGGAGAGAGACACC
Downstream 100 bases:
>100_bases GGGGTATTCCCATGCAATTGCGTAAAACACTCTTAGTAGGACTGGTATCTGTTGCCCTATTGAGTGGTTGCTCACTGTTT AACAGTGAAGAAGATGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MEVYTTENDQVDAVRRFFSENGKALAVGVVLGIGALVGWRYWQGNQNTVMTEASSAYQKVSTALSTNSAGNVSADSIALA EKFVQSNKNNYGVLVGLELAHDFVEQNAFDKAAQQLSQALGQTKDENLLSLINLRLARVQLQLKKPDEALKTLDAVQGDG WTAMAQDVRGDALLSKGDTAGARAAYSKAIESNASQALQALLRMKLNNLSS
Sequences:
>Translated_211_residues MEVYTTENDQVDAVRRFFSENGKALAVGVVLGIGALVGWRYWQGNQNTVMTEASSAYQKVSTALSTNSAGNVSADSIALA EKFVQSNKNNYGVLVGLELAHDFVEQNAFDKAAQQLSQALGQTKDENLLSLINLRLARVQLQLKKPDEALKTLDAVQGDG WTAMAQDVRGDALLSKGDTAGARAAYSKAIESNASQALQALLRMKLNNLSS >Mature_211_residues MEVYTTENDQVDAVRRFFSENGKALAVGVVLGIGALVGWRYWQGNQNTVMTEASSAYQKVSTALSTNSAGNVSADSIALA EKFVQSNKNNYGVLVGLELAHDFVEQNAFDKAAQQLSQALGQTKDENLLSLINLRLARVQLQLKKPDEALKTLDAVQGDG WTAMAQDVRGDALLSKGDTAGARAAYSKAIESNASQALQALLRMKLNNLSS
Specific function: Unknown
COG id: COG2976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0070 family [H]
Homologues:
Organism=Escherichia coli, GI1788860, Length=210, Percent_Identity=57.1428571428571, Blast_Score=244, Evalue=4e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018704 - InterPro: IPR011990 [H]
Pfam domain/function: PF09976 DUF2133 [H]
EC number: NA
Molecular weight: Translated: 22669; Mature: 22669
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVYTTENDQVDAVRRFFSENGKALAVGVVLGIGALVGWRYWQGNQNTVMTEASSAYQKV CCEECCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHEEECCCCEEEEHHHHHHHHH STALSTNSAGNVSADSIALAEKFVQSNKNNYGVLVGLELAHDFVEQNAFDKAAQQLSQAL HHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH GQTKDENLLSLINLRLARVQLQLKKPDEALKTLDAVQGDGWTAMAQDVRGDALLSKGDTA CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHCCCCCC GARAAYSKAIESNASQALQALLRMKLNNLSS HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEVYTTENDQVDAVRRFFSENGKALAVGVVLGIGALVGWRYWQGNQNTVMTEASSAYQKV CCEECCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHEEECCCCEEEEHHHHHHHHH STALSTNSAGNVSADSIALAEKFVQSNKNNYGVLVGLELAHDFVEQNAFDKAAQQLSQAL HHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH GQTKDENLLSLINLRLARVQLQLKKPDEALKTLDAVQGDGWTAMAQDVRGDALLSKGDTA CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHCCCCCC GARAAYSKAIESNASQALQALLRMKLNNLSS HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503; 9205837 [H]