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The map label for this gene is fdx [H]

Identifier: 170023527

GI number: 170023527

Start: 1408752

End: 1409087

Strand: Direct

Name: fdx [H]

Synonym: YPK_1281

Alternate gene names: 170023527

Gene position: 1408752-1409087 (Clockwise)

Preceding gene: 170023526

Following gene: 170023528

Centisome position: 30.04

GC content: 51.49

Gene sequence:

>336_bases
ATGCCCAAAATAGTATTTCTGCCCCATAAAGACCTTTGCCCGGATGGCGCAGTACTGGAAGCAATACAAGGTGAGACCAT
ATTAGACGTTGCTCTACGTCATGGGATCGATATTGAGCACGCCTGCGAAAAATCCTGCGCTTGTACCACCTGTCACTGCG
TGGTGCGCGAAGGGTTCGATTCACTGCCAGAAAGCAGCGAGTTGGAAGATGATATGCTGGATAAAGCCTGGGGTCTGGAG
CCAGAGAGCCGCCTGAGTTGCCAGGCGAGAGTGACCGATGAAGATCTGGTGGTTGAGATCCCACTCTATACCATTAACCA
TGCCCGAGAACACTAA

Upstream 100 bases:

>100_bases
TCAAAGCGTTAGATGCACAAACGCAAGATTTTGCCGCACGCCGGATGGACGCTTCCATTCGCCGTGCTTTAGCAGGTCAT
TCAGTGGATGAGGTTTAATC

Downstream 100 bases:

>100_bases
CGTTATCGCAATAGGTAGAAAGGATTGATATGAGTTTAACGTGGCAAGATACCCGCGAAATCGCCGAAGCCCTTTACGAA
AGGTTCCCGGATACCGATCC

Product: ferredoxin, 2Fe-2S type, ISC system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MPKIVFLPHKDLCPDGAVLEAIQGETILDVALRHGIDIEHACEKSCACTTCHCVVREGFDSLPESSELEDDMLDKAWGLE
PESRLSCQARVTDEDLVVEIPLYTINHAREH

Sequences:

>Translated_111_residues
MPKIVFLPHKDLCPDGAVLEAIQGETILDVALRHGIDIEHACEKSCACTTCHCVVREGFDSLPESSELEDDMLDKAWGLE
PESRLSCQARVTDEDLVVEIPLYTINHAREH
>Mature_110_residues
PKIVFLPHKDLCPDGAVLEAIQGETILDVALRHGIDIEHACEKSCACTTCHCVVREGFDSLPESSELEDDMLDKAWGLEP
ESRLSCQARVTDEDLVVEIPLYTINHAREH

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. Although the function of this ferredoxin is unknown it is probable that it has a role as a cellular electron transfer protein. Involved in the in vivo as

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI72534754, Length=85, Percent_Identity=48.2352941176471, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1788874, Length=111, Percent_Identity=90.990990990991, Blast_Score=209, Evalue=4e-56,
Organism=Caenorhabditis elegans, GI17544202, Length=86, Percent_Identity=45.3488372093023, Blast_Score=68, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6325004, Length=109, Percent_Identity=43.1192660550459, Blast_Score=80, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24661503, Length=86, Percent_Identity=45.3488372093023, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12370; Mature: 12239

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIVFLPHKDLCPDGAVLEAIQGETILDVALRHGIDIEHACEKSCACTTCHCVVREGFD
CCCEEECCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHH
SLPESSELEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPLYTINHAREH
CCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCEECCCCCCC
>Mature Secondary Structure 
PKIVFLPHKDLCPDGAVLEAIQGETILDVALRHGIDIEHACEKSCACTTCHCVVREGFD
CCEEECCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHH
SLPESSELEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPLYTINHAREH
CCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEECCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]