| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023485
Identifier: 170023485
GI number: 170023485
Start: 1364287
End: 1365126
Strand: Direct
Name: 170023485
Synonym: YPK_1239
Alternate gene names: NA
Gene position: 1364287-1365126 (Clockwise)
Preceding gene: 170023484
Following gene: 170023486
Centisome position: 29.09
GC content: 46.07
Gene sequence:
>840_bases ATGGAGCTAGACCCGCGCATAATCTCGTTATCAATAGAAATCGATGGCAAGTTACACGTTTACACCGATCTCTATATATC AGCATCCGGGCAAAAAACAGCGGGTTCGTTGCAAAATGAATGCACGATAAAAATTGCTAATCTTAAACAGTCTGACCGCA ATTTTCTGATCACAGAAACATCACCGCTCAACCGCCCGCGCAGGCGCAAGAAAATTATTCTATTCGCAGGGCGTAAAAGC TACGGTACGTTTAAGGTTTTTGAAGGGGACATTATCGGATGCACCCCGAGCCAGCCACCTGACATCATGCTCACAATGAA AGCGCGCACTGGTGCTTTCTTTATGACAGACATGCTCAGTTCAAGTTATGCAGCAGCGGTGCCACTCAGCAAAATAGCCG CCGACACTGCACAGAGCATGGATTTAACCCTCGATTTTCAGGCGTCGGACAAGAATATCAGTAATTACAATTTCACCGGG GCTAAGCTAAAACAGGTTGATAAGCTAGGTAGCGCAGGCAGCTATAACGCTTACATCGATGATGACCGATTGATTATAAA AAATAGAGATGTTCCGCTACTCAATGAGACCGTCACGCTCAATAAAAATACTGGAATGATTGGCGTCCCTGAGGTCACGG AAGAGGGCGTTAAAGTGAAATACCTGCTTGATCCGTCGAGCCGTCCGGGGGCCAGCCTGACCATAGAAAGTGATTTAAAT CCGGCAGCTAATGGCACCTTTGTTATTTACAAACTCAGTTATGACATCAGTAACCGAGACACACCTTTTTATCACACGGC GGAATGTCGGAGATTGGGGCTATGGCAGACACTACTTTAA
Upstream 100 bases:
>100_bases AAACTTTTACTTTAATACCCCAGATGATGAATATCCTCATTACGAAAGATTTATAGATAACCATCGTTTTTATTATATTC CGGCTACTGAGGTGTAAATC
Downstream 100 bases:
>100_bases CCGATGTTGACCCGGCGTTAACCGGCTCGCTATCTGGCACGTTGGAATACGTTTTCAAGAAGATGCTACAGGGAATAGAC GGCCAGTTGCCAGCGCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Related-Protein
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MELDPRIISLSIEIDGKLHVYTDLYISASGQKTAGSLQNECTIKIANLKQSDRNFLITETSPLNRPRRRKKIILFAGRKS YGTFKVFEGDIIGCTPSQPPDIMLTMKARTGAFFMTDMLSSSYAAAVPLSKIAADTAQSMDLTLDFQASDKNISNYNFTG AKLKQVDKLGSAGSYNAYIDDDRLIIKNRDVPLLNETVTLNKNTGMIGVPEVTEEGVKVKYLLDPSSRPGASLTIESDLN PAANGTFVIYKLSYDISNRDTPFYHTAECRRLGLWQTLL
Sequences:
>Translated_279_residues MELDPRIISLSIEIDGKLHVYTDLYISASGQKTAGSLQNECTIKIANLKQSDRNFLITETSPLNRPRRRKKIILFAGRKS YGTFKVFEGDIIGCTPSQPPDIMLTMKARTGAFFMTDMLSSSYAAAVPLSKIAADTAQSMDLTLDFQASDKNISNYNFTG AKLKQVDKLGSAGSYNAYIDDDRLIIKNRDVPLLNETVTLNKNTGMIGVPEVTEEGVKVKYLLDPSSRPGASLTIESDLN PAANGTFVIYKLSYDISNRDTPFYHTAECRRLGLWQTLL >Mature_279_residues MELDPRIISLSIEIDGKLHVYTDLYISASGQKTAGSLQNECTIKIANLKQSDRNFLITETSPLNRPRRRKKIILFAGRKS YGTFKVFEGDIIGCTPSQPPDIMLTMKARTGAFFMTDMLSSSYAAAVPLSKIAADTAQSMDLTLDFQASDKNISNYNFTG AKLKQVDKLGSAGSYNAYIDDDRLIIKNRDVPLLNETVTLNKNTGMIGVPEVTEEGVKVKYLLDPSSRPGASLTIESDLN PAANGTFVIYKLSYDISNRDTPFYHTAECRRLGLWQTLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30884; Mature: 30884
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELDPRIISLSIEIDGKLHVYTDLYISASGQKTAGSLQNECTIKIANLKQSDRNFLITET CCCCCEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEC SPLNRPRRRKKIILFAGRKSYGTFKVFEGDIIGCTPSQPPDIMLTMKARTGAFFMTDMLS CCCCCCCCCEEEEEEECCCCCCEEEEEECCEEECCCCCCCCEEEEEECCCCEEEEEHHHC SSYAAAVPLSKIAADTAQSMDLTLDFQASDKNISNYNFTGAKLKQVDKLGSAGSYNAYID CCCEEECCHHHHHHCCCCCEEEEEEEECCCCCCCCEEECCHHHHHHHHCCCCCCCCEEEC DDRLIIKNRDVPLLNETVTLNKNTGMIGVPEVTEEGVKVKYLLDPSSRPGASLTIESDLN CCEEEEECCCCCEECEEEEEECCCCEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCCC PAANGTFVIYKLSYDISNRDTPFYHTAECRRLGLWQTLL CCCCCEEEEEEEEECCCCCCCCCEECHHHHHCCCHHHCC >Mature Secondary Structure MELDPRIISLSIEIDGKLHVYTDLYISASGQKTAGSLQNECTIKIANLKQSDRNFLITET CCCCCEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEEEEC SPLNRPRRRKKIILFAGRKSYGTFKVFEGDIIGCTPSQPPDIMLTMKARTGAFFMTDMLS CCCCCCCCCEEEEEEECCCCCCEEEEEECCEEECCCCCCCCEEEEEECCCCEEEEEHHHC SSYAAAVPLSKIAADTAQSMDLTLDFQASDKNISNYNFTGAKLKQVDKLGSAGSYNAYID CCCEEECCHHHHHHCCCCCEEEEEEEECCCCCCCCEEECCHHHHHHHHCCCCCCCCEEEC DDRLIIKNRDVPLLNETVTLNKNTGMIGVPEVTEEGVKVKYLLDPSSRPGASLTIESDLN CCEEEEECCCCCEECEEEEEECCCCEEECCCCCCCCEEEEEEECCCCCCCCEEEEECCCC PAANGTFVIYKLSYDISNRDTPFYHTAECRRLGLWQTLL CCCCCEEEEEEEEECCCCCCCCCEECHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA