| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023476
Identifier: 170023476
GI number: 170023476
Start: 1357970
End: 1358467
Strand: Direct
Name: 170023476
Synonym: YPK_1230
Alternate gene names: NA
Gene position: 1357970-1358467 (Clockwise)
Preceding gene: 170023475
Following gene: 170023477
Centisome position: 28.96
GC content: 53.41
Gene sequence:
>498_bases ATGGCCGGGCAGTGGCGCGGTAGCGGCGGCAGCAAAATAGCGCGTATTCGTCGTGAAATTGCCGAACTCAATAGTATGCA AACGCGTGTTGGATGGATGGAATCAGCGCGGTACGCGGACGGGAAGCCGGTTGCCGGGATCGCTGTGGTACAGGAATACG GCACCGAAGATTTAACCATCCCGCCGCGATCATTTATGCGAACCACACAAGATGAGAAAAAAATCGAGTGGGACAGCAAT ATGAAAAAAGGTTTCACAGCTGTCATTAAAGGGACTCGCACTAGCGCACAGGTAATGGAAGCTCTCGGCTTAATGGCGGC GGGTGACGTTCGCAAAAAAATTACACAGATATTCACCCCGCCACTGGCCATTAGCACGATAAAAGCCCGTGCGCGAAAGG CGGGACCGAGCGCACGCGCGATATCTATCAAGCCGTTAAATGACTCAGGGCTGATGCTAGCGACGCTCACACACGTAGTT ACCGGGGGGGATGAATAA
Upstream 100 bases:
>100_bases AATTGTGGGCGTTCCTCAATATCAAATCAGCGGGCGGGGCATATGTCGGCGGCTTACCTGAGCGCACCGCTTTTCGTAAA GTGGGCGGGGTGTTCTGGTA
Downstream 100 bases:
>100_bases TGATACCGGGTATCAATTTGTTAAACGTCGCGCTGGGCGTTATTGGCTCACAGCCGGTAGTCTATTTTCGCGACAGTGGC CAGCGCGAAACCTTGGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MAGQWRGSGGSKIARIRREIAELNSMQTRVGWMESARYADGKPVAGIAVVQEYGTEDLTIPPRSFMRTTQDEKKIEWDSN MKKGFTAVIKGTRTSAQVMEALGLMAAGDVRKKITQIFTPPLAISTIKARARKAGPSARAISIKPLNDSGLMLATLTHVV TGGDE
Sequences:
>Translated_165_residues MAGQWRGSGGSKIARIRREIAELNSMQTRVGWMESARYADGKPVAGIAVVQEYGTEDLTIPPRSFMRTTQDEKKIEWDSN MKKGFTAVIKGTRTSAQVMEALGLMAAGDVRKKITQIFTPPLAISTIKARARKAGPSARAISIKPLNDSGLMLATLTHVV TGGDE >Mature_164_residues AGQWRGSGGSKIARIRREIAELNSMQTRVGWMESARYADGKPVAGIAVVQEYGTEDLTIPPRSFMRTTQDEKKIEWDSNM KKGFTAVIKGTRTSAQVMEALGLMAAGDVRKKITQIFTPPLAISTIKARARKAGPSARAISIKPLNDSGLMLATLTHVVT GGDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17877; Mature: 17746
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGQWRGSGGSKIARIRREIAELNSMQTRVGWMESARYADGKPVAGIAVVQEYGTEDLTI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC PPRSFMRTTQDEKKIEWDSNMKKGFTAVIKGTRTSAQVMEALGLMAAGDVRKKITQIFTP CCHHHHHCCCCHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC PLAISTIKARARKAGPSARAISIKPLNDSGLMLATLTHVVTGGDE CHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure AGQWRGSGGSKIARIRREIAELNSMQTRVGWMESARYADGKPVAGIAVVQEYGTEDLTI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC PPRSFMRTTQDEKKIEWDSNMKKGFTAVIKGTRTSAQVMEALGLMAAGDVRKKITQIFTP CCHHHHHCCCCHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC PLAISTIKARARKAGPSARAISIKPLNDSGLMLATLTHVVTGGDE CHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA