| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023473
Identifier: 170023473
GI number: 170023473
Start: 1355969
End: 1357102
Strand: Direct
Name: 170023473
Synonym: YPK_1227
Alternate gene names: NA
Gene position: 1355969-1357102 (Clockwise)
Preceding gene: 170023472
Following gene: 170023474
Centisome position: 28.92
GC content: 52.38
Gene sequence:
>1134_bases ATGAAACAATCAGTTACTCACAGTTCACTTGCACCGCGCAATGTCCGCCCGTTATCGCTGACAGCAAAAGACATCACTGG CAACGCGCATTTAGATTTAGGCCGACTGGGGATTAATATCTCGCGCGGCACTATTAGCAACATGATCAGCAGCATGGGTT TGGACAGCAATGATACCGGGCTAGCACCATCGCCACTACCCGGGCTGATGCCGGGCGGTTCGCCGACACCTATCCAATTT CTGCAAGCCTGGCTACCGGGCTTTGTGCGCATGATTACAGCCGCGCGCAAAATTGATGAGTTGATCGGCATTGCGACCGT TGGAGCCTGGGAAGATGAAGAAATTGTACAGGGGATGCTGGAGCCTATTGGCAGCGCGGCTATTTACTCTGACCACGGCA ATATTCCGCTGGCGTCTTGGCAAGTGGGTTATGCGCGTCGCAGCATTGTACGTTTTGAACAGGGTTTTTCGGTCGGCGCT CTTGAAGAAGCCCGCACAGCTAAAGCGAGCCTTGCGACAGCAGCGGAAAAACGCAGTAGCGCGGCACAGTCGTTAGATGT CTCACGTAATCGGGTAGGATTTTACGGCTACAACGATGGTCAGAATATGACCTACGGTTTTCTAAATGAACCGAACCTGT TACCTGCACTAACCGCGGCACCCGGCGCAGGTGGCGATACGACCTGGCAGAGTAAAACCTTTTTGGAAATTACCGCTGAT ATTCGCCGTATTTTGGTTGAACTCCAGGTGGCGAGCATGGACACCATCGACCCTGAAGCAATGCCGATCACTATCGCCCT CCCTACCGGCGTTAATCAGTACCTGAGCGTGACCTCAACCTATGGCAATTCGGTGCGCCAGTGGGTGAAAGAAAACTATC CCAATCTGCGTTTTGTCACCGCACCGGAGATGAAAGAGGCGGTGGGCGGTGAAAGCGTTACTTACGCATACCCTGATTCT GTCAATGACGGTTCAAGTGACGATGGCCAAGTGTGGTCGCAAAACGTGCCGAGCAAATTCACGGTGATCGGCGTTGAAAA ACGCAGCAAAGTTTATGTTGAAGATTTCAGTAACGCTACAGCGGGGGTGCTGCTCAAGCGTCCGTATCTTGTTATTCGCC TGATCGGCATTTAA
Upstream 100 bases:
>100_bases TATCTTGCAGTACCTAACGCCAAAGTAGCCCGACTCCCGCAGACGAGCGCCACGGGCGGTCTTATCGTCGCGCAACTGAC CAATTAATAAAGGACGAAAA
Downstream 100 bases:
>100_bases CAGTAACTATTGAACATCAAGGGGGCCAATGCCTCCTTTTTTATTTTTAGGAGTTTCTATGCACTATGTTTTTTCCACAA TTTCAACAGATGTTAAGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Protein
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKQSVTHSSLAPRNVRPLSLTAKDITGNAHLDLGRLGINISRGTISNMISSMGLDSNDTGLAPSPLPGLMPGGSPTPIQF LQAWLPGFVRMITAARKIDELIGIATVGAWEDEEIVQGMLEPIGSAAIYSDHGNIPLASWQVGYARRSIVRFEQGFSVGA LEEARTAKASLATAAEKRSSAAQSLDVSRNRVGFYGYNDGQNMTYGFLNEPNLLPALTAAPGAGGDTTWQSKTFLEITAD IRRILVELQVASMDTIDPEAMPITIALPTGVNQYLSVTSTYGNSVRQWVKENYPNLRFVTAPEMKEAVGGESVTYAYPDS VNDGSSDDGQVWSQNVPSKFTVIGVEKRSKVYVEDFSNATAGVLLKRPYLVIRLIGI
Sequences:
>Translated_377_residues MKQSVTHSSLAPRNVRPLSLTAKDITGNAHLDLGRLGINISRGTISNMISSMGLDSNDTGLAPSPLPGLMPGGSPTPIQF LQAWLPGFVRMITAARKIDELIGIATVGAWEDEEIVQGMLEPIGSAAIYSDHGNIPLASWQVGYARRSIVRFEQGFSVGA LEEARTAKASLATAAEKRSSAAQSLDVSRNRVGFYGYNDGQNMTYGFLNEPNLLPALTAAPGAGGDTTWQSKTFLEITAD IRRILVELQVASMDTIDPEAMPITIALPTGVNQYLSVTSTYGNSVRQWVKENYPNLRFVTAPEMKEAVGGESVTYAYPDS VNDGSSDDGQVWSQNVPSKFTVIGVEKRSKVYVEDFSNATAGVLLKRPYLVIRLIGI >Mature_377_residues MKQSVTHSSLAPRNVRPLSLTAKDITGNAHLDLGRLGINISRGTISNMISSMGLDSNDTGLAPSPLPGLMPGGSPTPIQF LQAWLPGFVRMITAARKIDELIGIATVGAWEDEEIVQGMLEPIGSAAIYSDHGNIPLASWQVGYARRSIVRFEQGFSVGA LEEARTAKASLATAAEKRSSAAQSLDVSRNRVGFYGYNDGQNMTYGFLNEPNLLPALTAAPGAGGDTTWQSKTFLEITAD IRRILVELQVASMDTIDPEAMPITIALPTGVNQYLSVTSTYGNSVRQWVKENYPNLRFVTAPEMKEAVGGESVTYAYPDS VNDGSSDDGQVWSQNVPSKFTVIGVEKRSKVYVEDFSNATAGVLLKRPYLVIRLIGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40601; Mature: 40601
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSVTHSSLAPRNVRPLSLTAKDITGNAHLDLGRLGINISRGTISNMISSMGLDSNDTG CCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEHHEEEEECHHHHHHHHHHCCCCCCCCC LAPSPLPGLMPGGSPTPIQFLQAWLPGFVRMITAARKIDELIGIATVGAWEDEEIVQGML CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHH EPIGSAAIYSDHGNIPLASWQVGYARRSIVRFEQGFSVGALEEARTAKASLATAAEKRSS HHCCCEEEEECCCCCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH AAQSLDVSRNRVGFYGYNDGQNMTYGFLNEPNLLPALTAAPGAGGDTTWQSKTFLEITAD HHHHHCCCCCEEEEEEECCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCEEEHHHHH IRRILVELQVASMDTIDPEAMPITIALPTGVNQYLSVTSTYGNSVRQWVKENYPNLRFVT HHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHEEHHHHHHHHHHHHHHCCCCEEEEE APEMKEAVGGESVTYAYPDSVNDGSSDDGQVWSQNVPSKFTVIGVEKRSKVYVEDFSNAT CCHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCEEEEECCCCCH AGVLLKRPYLVIRLIGI HHEEEECCEEEEEEECC >Mature Secondary Structure MKQSVTHSSLAPRNVRPLSLTAKDITGNAHLDLGRLGINISRGTISNMISSMGLDSNDTG CCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEHHEEEEECHHHHHHHHHHCCCCCCCCC LAPSPLPGLMPGGSPTPIQFLQAWLPGFVRMITAARKIDELIGIATVGAWEDEEIVQGML CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHH EPIGSAAIYSDHGNIPLASWQVGYARRSIVRFEQGFSVGALEEARTAKASLATAAEKRSS HHCCCEEEEECCCCCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH AAQSLDVSRNRVGFYGYNDGQNMTYGFLNEPNLLPALTAAPGAGGDTTWQSKTFLEITAD HHHHHCCCCCEEEEEEECCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCEEEHHHHH IRRILVELQVASMDTIDPEAMPITIALPTGVNQYLSVTSTYGNSVRQWVKENYPNLRFVT HHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHEEHHHHHHHHHHHHHHCCCCEEEEE APEMKEAVGGESVTYAYPDSVNDGSSDDGQVWSQNVPSKFTVIGVEKRSKVYVEDFSNAT CCHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCEEEEEEECCCCEEEEECCCCCH AGVLLKRPYLVIRLIGI HHEEEECCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA