Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is ygdI [C]

Identifier: 170023300

GI number: 170023300

Start: 1188790

End: 1188924

Strand: Direct

Name: ygdI [C]

Synonym: YPK_1051

Alternate gene names: 170023300

Gene position: 1188790-1188924 (Clockwise)

Preceding gene: 170023297

Following gene: 170023301

Centisome position: 25.35

GC content: 42.96

Gene sequence:

>135_bases
ATGCATATTGACGTTATACACATTGACGTTATACACATTAGTGATGGTCGCACTATCGTTACTGATGGTAAACCGAAAGT
AGACGATGAGATAGAGATGATCAGTCACCCCTGTGTGAATGGGGGCCGAGAATAG

Upstream 100 bases:

>100_bases
ATCCATTGGATTAAAAACTTTCATACTGTTGTTGGCATCCTGTGAGTGACCCCGAAATTTTTTTGCTTTTATCATGGTCG
CGTGTTTGAGCAATGATGTT

Downstream 100 bases:

>100_bases
GTAAATCGATCAGACGTAAAAGAAATGGTTAAAGATAACGAGTTTAATGCTAAACCGAGGGAGAGAAGAGACCGGATACA
ACATTAAGGTGGTAGCAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 44; Mature: 44

Protein sequence:

>44_residues
MHIDVIHIDVIHISDGRTIVTDGKPKVDDEIEMISHPCVNGGRE

Sequences:

>Translated_44_residues
MHIDVIHIDVIHISDGRTIVTDGKPKVDDEIEMISHPCVNGGRE
>Mature_44_residues
MHIDVIHIDVIHISDGRTIVTDGKPKVDDEIEMISHPCVNGGRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4893; Mature: 4893

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIDVIHIDVIHISDGRTIVTDGKPKVDDEIEMISHPCVNGGRE
CEEEEEEEEEEEECCCCEEEECCCCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MHIDVIHIDVIHISDGRTIVTDGKPKVDDEIEMISHPCVNGGRE
CEEEEEEEEEEEECCCCEEEECCCCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA