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The map label for this gene is ppdA [H]

Identifier: 170023286

GI number: 170023286

Start: 1166769

End: 1167338

Strand: Direct

Name: ppdA [H]

Synonym: YPK_1037

Alternate gene names: 170023286

Gene position: 1166769-1167338 (Clockwise)

Preceding gene: 170023285

Following gene: 170023287

Centisome position: 24.88

GC content: 45.96

Gene sequence:

>570_bases
ATGAAAATCTATAGCATAAAAACCGGCAAGCTATTACCAAAGGCACCTTTGCTTAGAAAGCAAAAAGTTTTTATAAAACA
AAGATCACTAATAAAACAAAGAGGAATAAGCCTAATCGAACTGTTAGTAGTCATTACATTGGTCAGTGTCATGACCTTAT
GGGGAGGGCAGAGCTGGCATCATTACCGACAGCGGGCAAAGCTTGCCGACAGTGCTCGCCAATTGCTCGCTTTCTTAACT
CATTTACAGGCAGAAGCTAATCGCAATAACCGTACTGCCATATTGTGGGCCCAACCGGATGGGCAAGGGTGTTTGGGGAG
TGGTCATAAACCGACACCTCCCTGTACTGGGCTGGCTGGGTCGTTATTTATCCCGCCTTACCGCGATATTGCAATAACGC
TCCCGCTACAAAAAGAGATGGGTTTTTACGGTGTTCGAAATACAGCCCAAGCGGGTAACATCATACTCAGTAGCCCCGCA
GGACGTATTCGTCTGGTTATCTCAAGCCGTGGGCGTATAAGGTTATGTAGTGAACAACAATCCATGGCAGGCATCCATTT
ATGCCTTTAG

Upstream 100 bases:

>100_bases
CTCCCTGTATTTCTGTATCCATTGATTATGTTTTGCGTACCCCTTCCAACACCGGACGTTTGCCTCTGGAACTCAAATTT
CAGCAACGTAAACTCACGGC

Downstream 100 bases:

>100_bases
TGGTCAATGTCTTGTCTACCCCACTCAACGCGCAGCCAACACGAACCGCGGGTTTTACCTTGCCTGAAATGATGCTGGCG
CTAAGTTTCGGTAGCCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKIYSIKTGKLLPKAPLLRKQKVFIKQRSLIKQRGISLIELLVVITLVSVMTLWGGQSWHHYRQRAKLADSARQLLAFLT
HLQAEANRNNRTAILWAQPDGQGCLGSGHKPTPPCTGLAGSLFIPPYRDIAITLPLQKEMGFYGVRNTAQAGNIILSSPA
GRIRLVISSRGRIRLCSEQQSMAGIHLCL

Sequences:

>Translated_189_residues
MKIYSIKTGKLLPKAPLLRKQKVFIKQRSLIKQRGISLIELLVVITLVSVMTLWGGQSWHHYRQRAKLADSARQLLAFLT
HLQAEANRNNRTAILWAQPDGQGCLGSGHKPTPPCTGLAGSLFIPPYRDIAITLPLQKEMGFYGVRNTAQAGNIILSSPA
GRIRLVISSRGRIRLCSEQQSMAGIHLCL
>Mature_189_residues
MKIYSIKTGKLLPKAPLLRKQKVFIKQRSLIKQRGISLIELLVVITLVSVMTLWGGQSWHHYRQRAKLADSARQLLAFLT
HLQAEANRNNRTAILWAQPDGQGCLGSGHKPTPPCTGLAGSLFIPPYRDIAITLPLQKEMGFYGVRNTAQAGNIILSSPA
GRIRLVISSRGRIRLCSEQQSMAGIHLCL

Specific function: Not yet known [H]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789190, Length=150, Percent_Identity=31.3333333333333, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 20931; Mature: 20931

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYSIKTGKLLPKAPLLRKQKVFIKQRSLIKQRGISLIELLVVITLVSVMTLWGGQSWH
CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHH
HYRQRAKLADSARQLLAFLTHLQAEANRNNRTAILWAQPDGQGCLGSGHKPTPPCTGLAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
SLFIPPYRDIAITLPLQKEMGFYGVRNTAQAGNIILSSPAGRIRLVISSRGRIRLCSEQQ
CCCCCCCCCEEEEEECHHHCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCEEEECCCC
SMAGIHLCL
CCCCEEECC
>Mature Secondary Structure
MKIYSIKTGKLLPKAPLLRKQKVFIKQRSLIKQRGISLIELLVVITLVSVMTLWGGQSWH
CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHH
HYRQRAKLADSARQLLAFLTHLQAEANRNNRTAILWAQPDGQGCLGSGHKPTPPCTGLAG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
SLFIPPYRDIAITLPLQKEMGFYGVRNTAQAGNIILSSPAGRIRLVISSRGRIRLCSEQQ
CCCCCCCCCEEEEEECHHHCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCEEEECCCC
SMAGIHLCL
CCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3520484; 9278503; 7934814 [H]