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The map label for this gene is 170023193

Identifier: 170023193

GI number: 170023193

Start: 1062691

End: 1063056

Strand: Direct

Name: 170023193

Synonym: YPK_0944

Alternate gene names: NA

Gene position: 1062691-1063056 (Clockwise)

Preceding gene: 170023192

Following gene: 170023195

Centisome position: 22.66

GC content: 50.27

Gene sequence:

>366_bases
ATGGTTATCAGTGATTATGTCGGCGGCGGGATGAGTCACGAAGAAGCTGGACAAACAGTTAATGACTATTTGACGTTTGG
TGATCTGGCTATATTAAAAGTGCGCAATGGGTGGGGAGATGTCGTTGATTTAGTTCCCTTACCGGGGCTGTATGTGCGCC
GGCGAAAAGACGGGGATTTCTCTGTACTGCAAAAAGGCCCGCCGCTGATTTACCCGCCGAGCGATGTGATATTTCGTAAG
CTGTATGATCCACAACAGCAAGTCTACGGCCTGCCGGATTACATTGGCGGGATGCACAGCGCGTTACTCAATAATCATCC
CAATCGGCTTTATGCGGGGTTGGCGGCAATGTCACCCAACCATTGA

Upstream 100 bases:

>100_bases
GACCGCCGACCACTGGCGGCAACCCATCGACCGACTCGCGCTGGCGCAACTTGCGAACATGTGCGGGCACCACGGCGGGG
TGTTACACGCCCGCCGCAAT

Downstream 100 bases:

>100_bases
CCGCGTTGGCGGCTTTTTCTGCGGACAACTGGCCAACATTGGCTGTGTCTTGTGGATTGATATCATTATCCGCCGCAATG
ATGATTTTCGCGGCAGGCCA

Product: putative portal vertex protein

Products: NA

Alternate protein names: Phage Portal Protein Pbsx Family; Portal Vertex Protein; Phage Portal Protein; Phage Capsid Portal Protein; Portal Protein; Portal Vertex Protein Bacteriophage Origin

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MVISDYVGGGMSHEEAGQTVNDYLTFGDLAILKVRNGWGDVVDLVPLPGLYVRRRKDGDFSVLQKGPPLIYPPSDVIFRK
LYDPQQQVYGLPDYIGGMHSALLNNHPNRLYAGLAAMSPNH

Sequences:

>Translated_121_residues
MVISDYVGGGMSHEEAGQTVNDYLTFGDLAILKVRNGWGDVVDLVPLPGLYVRRRKDGDFSVLQKGPPLIYPPSDVIFRK
LYDPQQQVYGLPDYIGGMHSALLNNHPNRLYAGLAAMSPNH
>Mature_121_residues
MVISDYVGGGMSHEEAGQTVNDYLTFGDLAILKVRNGWGDVVDLVPLPGLYVRRRKDGDFSVLQKGPPLIYPPSDVIFRK
LYDPQQQVYGLPDYIGGMHSALLNNHPNRLYAGLAAMSPNH

Specific function: Unknown

COG id: COG5518

COG function: function code R; Bacteriophage capsid portal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13370; Mature: 13370

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVISDYVGGGMSHEEAGQTVNDYLTFGDLAILKVRNGWGDVVDLVPLPGLYVRRRKDGDF
CEECCCCCCCCCCHHHCCCHHHHHEECCEEEEEEECCCCCEEECCCCCCCEEEECCCCCE
SVLQKGPPLIYPPSDVIFRKLYDPQQQVYGLPDYIGGMHSALLNNHPNRLYAGLAAMSPN
EEECCCCCEEECCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCC
H
C
>Mature Secondary Structure
MVISDYVGGGMSHEEAGQTVNDYLTFGDLAILKVRNGWGDVVDLVPLPGLYVRRRKDGDF
CEECCCCCCCCCCHHHCCCHHHHHEECCEEEEEEECCCCCEEECCCCCCCEEEECCCCCE
SVLQKGPPLIYPPSDVIFRKLYDPQQQVYGLPDYIGGMHSALLNNHPNRLYAGLAAMSPN
EEECCCCCEEECCHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA