| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023186
Identifier: 170023186
GI number: 170023186
Start: 1055746
End: 1056447
Strand: Reverse
Name: 170023186
Synonym: YPK_0937
Alternate gene names: NA
Gene position: 1056447-1055746 (Counterclockwise)
Preceding gene: 170023187
Following gene: 170023185
Centisome position: 22.53
GC content: 55.27
Gene sequence:
>702_bases GTGCAGGCCGAATTACTGGCGGGCCGGCTCATGCAGGCTGATTTTACGCTCAACGCCGCGCAGTGGGGCGCGCTCAGGGA TACGCTGAGAAACCTTGAATTAACCCCGGCAATCCGGCGGCGGCTGTTGTGGCGAATATTGAAACTCGGCGTCATGCCGG CGGCTAAGCGTCATCAGCGGAAACAGGAAAATGCAGAGGGGGTGAAGTGGCCCGGTCGTGCTGACGGAAAGCGGGTAAAG ATGATGCGCAAACTGCCGGGAATGATGGTGATTGGCGAATTGCCGGCCTCGGATTCAGCAAAGATTTATTTGCGGGGTAA TCATAAAACCCCGCCCGGCGTGATTGGGCGTATGCAACAAACCGGCGTTACGACCACAGAAAACGCCGCGTCAGCGGCTA AACGGCAAAATGGTGATGAGTCTGCGACGTTGCGCCAGGCTAAAAAATTACTGGATCTGGGTTACGTCGTATTTCCCGTT AGCGCCCCCCGAGCGCCGTCAGTTGCGGAAATCATTCGGACACTCTCAATGAAAAAAGCCGGGGTGATTATTCGCAGTCT TGAAGAGCGGGAAGCAAAGCAGAGCTGGACAATCACAGTACCCCCGCGCGCCTGGCTTGGGGTCAGTGATGAAGAATTTA ATCAAATACTGGCGCGTCAGATGCAGGCCATTAACTACGGTAACGGAAGGAACAGACGATGA
Upstream 100 bases:
>100_bases AAAGAAGATGCCGAGGCGGGGACTATCCCGCTGGGCGGCAAACAATATCGAGTCATTGAAGATGCGCGGGTCAATGTTGC TAAAGCCGCGTGGATCCACG
Downstream 100 bases:
>100_bases CATTCCCCACAGTCAATATAAATCAATTTAATCAGCGCCAGGGCCGAATTAACGAAGTAGAGCGAACATTGTTATTTGTC GGTCGCGCAAATGAAAACGC
Product: phage-like protein
Products: NA
Alternate protein names: Phage Gene; Phage Protein
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MQAELLAGRLMQADFTLNAAQWGALRDTLRNLELTPAIRRRLLWRILKLGVMPAAKRHQRKQENAEGVKWPGRADGKRVK MMRKLPGMMVIGELPASDSAKIYLRGNHKTPPGVIGRMQQTGVTTTENAASAAKRQNGDESATLRQAKKLLDLGYVVFPV SAPRAPSVAEIIRTLSMKKAGVIIRSLEEREAKQSWTITVPPRAWLGVSDEEFNQILARQMQAINYGNGRNRR
Sequences:
>Translated_233_residues MQAELLAGRLMQADFTLNAAQWGALRDTLRNLELTPAIRRRLLWRILKLGVMPAAKRHQRKQENAEGVKWPGRADGKRVK MMRKLPGMMVIGELPASDSAKIYLRGNHKTPPGVIGRMQQTGVTTTENAASAAKRQNGDESATLRQAKKLLDLGYVVFPV SAPRAPSVAEIIRTLSMKKAGVIIRSLEEREAKQSWTITVPPRAWLGVSDEEFNQILARQMQAINYGNGRNRR >Mature_233_residues MQAELLAGRLMQADFTLNAAQWGALRDTLRNLELTPAIRRRLLWRILKLGVMPAAKRHQRKQENAEGVKWPGRADGKRVK MMRKLPGMMVIGELPASDSAKIYLRGNHKTPPGVIGRMQQTGVTTTENAASAAKRQNGDESATLRQAKKLLDLGYVVFPV SAPRAPSVAEIIRTLSMKKAGVIIRSLEEREAKQSWTITVPPRAWLGVSDEEFNQILARQMQAINYGNGRNRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26030; Mature: 26030
Theoretical pI: Translated: 11.63; Mature: 11.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAELLAGRLMQADFTLNAAQWGALRDTLRNLELTPAIRRRLLWRILKLGVMPAAKRHQR CCCHHHHHHHHHCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH KQENAEGVKWPGRADGKRVKMMRKLPGMMVIGELPASDSAKIYLRGNHKTPPGVIGRMQQ HHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHH TGVTTTENAASAAKRQNGDESATLRQAKKLLDLGYVVFPVSAPRAPSVAEIIRTLSMKKA CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHH GVIIRSLEEREAKQSWTITVPPRAWLGVSDEEFNQILARQMQAINYGNGRNRR HHHHHHHHHHHHHCCEEEEECCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQAELLAGRLMQADFTLNAAQWGALRDTLRNLELTPAIRRRLLWRILKLGVMPAAKRHQR CCCHHHHHHHHHCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH KQENAEGVKWPGRADGKRVKMMRKLPGMMVIGELPASDSAKIYLRGNHKTPPGVIGRMQQ HHHCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHH TGVTTTENAASAAKRQNGDESATLRQAKKLLDLGYVVFPVSAPRAPSVAEIIRTLSMKKA CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHH GVIIRSLEEREAKQSWTITVPPRAWLGVSDEEFNQILARQMQAINYGNGRNRR HHHHHHHHHHHHHCCEEEEECCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA