| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023180
Identifier: 170023180
GI number: 170023180
Start: 1052012
End: 1052635
Strand: Reverse
Name: 170023180
Synonym: YPK_0931
Alternate gene names: NA
Gene position: 1052635-1052012 (Counterclockwise)
Preceding gene: 170023181
Following gene: 170023179
Centisome position: 22.45
GC content: 45.99
Gene sequence:
>624_bases ATGGATAAGTTGCCGAAAATCACCTTGCCGGCATGGATGAACAAGGGCGAACCCGTCAAGTTAATGCGCGCTTGCCTGGC GTTTTGGCAAAAAGTTTACACATGGTTAAAGTGGCCGCTTAATCAAACCGATCCGCTTCTTTGCGTTGTGCCGCTGCTCA ATGTTCTTGCGTATCAGCGCGATGTCGCGCGGTTCCCTGATGAGCCGCTGTCACTGTTTCGTAAGCGAGTAAATTACGCG TTTATTAACGCCAGGGATGCCGGCTCGCTGGCGGGGTTTGCGGCAATATTTGAGCGGCTCGGTATCGGCGTTATTACGCA ACATGAGCGGCAGCCAGGTTACGACTGGGACATTATTTTAATTCGCGTTAATGATGTTCAACTTTCAGAAAATAATAATT TAATGATGGCATTAGTTCGGCAATATGGGCGCACATGCCGCCGTTATATATTTCAAGTTGTCAACGCTACGACATTGAAT ATACACGGTGGAATGTTTGGCGGTGATTATTATTATCATCATGCACAATTAAATATTGTACCGGGTCTGATGCCAGGAAA CATTATGTTAACGCCTGCACAAATGCAGCACACACACGCAGTATATTCGGCAAAATTAGATTAA
Upstream 100 bases:
>100_bases GCAAATTTTGCTGAAATTGAGTCACTGACATTTTCCCAGGGCGACATTGTCAGTGGGCTATCTGTCCCCCGCCTGGGCGT ACTAACACTGGAGAAAGCGA
Downstream 100 bases:
>100_bases GGATTATTTATGGCTACGGTAATTACCCGTGCTTTTGAAAACTGGCAGGCGCAACAAACATTAAATAACTTACCTGCCCG TCCGGACACTGTTATTTTTG
Product: putative bacteriophage protein
Products: NA
Alternate protein names: Phage-Like Protein; Bacteriophage Protein; Hemolysins-Like Protein Containing CBS Domains
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MDKLPKITLPAWMNKGEPVKLMRACLAFWQKVYTWLKWPLNQTDPLLCVVPLLNVLAYQRDVARFPDEPLSLFRKRVNYA FINARDAGSLAGFAAIFERLGIGVITQHERQPGYDWDIILIRVNDVQLSENNNLMMALVRQYGRTCRRYIFQVVNATTLN IHGGMFGGDYYYHHAQLNIVPGLMPGNIMLTPAQMQHTHAVYSAKLD
Sequences:
>Translated_207_residues MDKLPKITLPAWMNKGEPVKLMRACLAFWQKVYTWLKWPLNQTDPLLCVVPLLNVLAYQRDVARFPDEPLSLFRKRVNYA FINARDAGSLAGFAAIFERLGIGVITQHERQPGYDWDIILIRVNDVQLSENNNLMMALVRQYGRTCRRYIFQVVNATTLN IHGGMFGGDYYYHHAQLNIVPGLMPGNIMLTPAQMQHTHAVYSAKLD >Mature_207_residues MDKLPKITLPAWMNKGEPVKLMRACLAFWQKVYTWLKWPLNQTDPLLCVVPLLNVLAYQRDVARFPDEPLSLFRKRVNYA FINARDAGSLAGFAAIFERLGIGVITQHERQPGYDWDIILIRVNDVQLSENNNLMMALVRQYGRTCRRYIFQVVNATTLN IHGGMFGGDYYYHHAQLNIVPGLMPGNIMLTPAQMQHTHAVYSAKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23751; Mature: 23751
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLPKITLPAWMNKGEPVKLMRACLAFWQKVYTWLKWPLNQTDPLLCVVPLLNVLAYQR CCCCCCEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHH DVARFPDEPLSLFRKRVNYAFINARDAGSLAGFAAIFERLGIGVITQHERQPGYDWDIIL HHHHCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEEEE IRVNDVQLSENNNLMMALVRQYGRTCRRYIFQVVNATTLNIHGGMFGGDYYYHHAQLNIV EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEEEEEE PGLMPGNIMLTPAQMQHTHAVYSAKLD CCCCCCCEEEECHHHHHHHHHHEECCC >Mature Secondary Structure MDKLPKITLPAWMNKGEPVKLMRACLAFWQKVYTWLKWPLNQTDPLLCVVPLLNVLAYQR CCCCCCEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHH DVARFPDEPLSLFRKRVNYAFINARDAGSLAGFAAIFERLGIGVITQHERQPGYDWDIIL HHHHCCCHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCEEEEE IRVNDVQLSENNNLMMALVRQYGRTCRRYIFQVVNATTLNIHGGMFGGDYYYHHAQLNIV EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEEEEEE PGLMPGNIMLTPAQMQHTHAVYSAKLD CCCCCCCEEEECHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA