| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023177
Identifier: 170023177
GI number: 170023177
Start: 1049182
End: 1049892
Strand: Reverse
Name: 170023177
Synonym: YPK_0928
Alternate gene names: NA
Gene position: 1049892-1049182 (Counterclockwise)
Preceding gene: 170023178
Following gene: 170023176
Centisome position: 22.39
GC content: 58.23
Gene sequence:
>711_bases GTGACGTGGCATAAATCGACGTTACGCATTCCGAAAAATCTGGCCCCGGTCAGCTGCTCGACCGTGGCCGTTCATCCCTG GGCGTTTGGCGTAGGCCAGACGGAGAAATCAGGTTCGTTTCTGAGTCCGGCTAATGCAATTAACGCACTCGCCAGCCGGT TAGCCGGCGCAGACAGTGATCAGGATGTGCTGATATTGCTTATTACTGCGAAAACCCTGGCTGAATTTATTACGTTGTTG ACCGCCGCCGCTGAAGTGTTCCCGATACCGTCGCTAACGCAAGTTCAGCGACGGGCTAAGGCGGCGTTAAGTCTCGATAG CAGTAAAATGCAAATCCCGGCAAAGCCCGGCGGCTTGCCCGCCAGTGCGCCGCTGTCAGTTGCGACTACGCGCCAGGCGT CCGGGGCGCAAGCCTTGCAAAAAGCGATCAGTGATACCGCCGCCGGCAGCAGTAGCGCGGCTATCGGTACCGCGCTGGCT GCATTCGCACAGCAGCGCGCCGCAATGCTGGCCGAGGTAATGAGTGGGCTGGAACAATTGCAGGGGGCGAGTGTCCCGGT CTGGTCGCTGGCCGTTGATGGCAACACGCAGACGGCAATCGCAGAGATGAAGAAAGAGATCCCCGATAGCCAGGCCATTT TTAGCCTGGCGTTACTGTTTGTGGGCGCAGATTTGGCCCCACTGCGGGCAATGGTGGTAAATCATGACTGA
Upstream 100 bases:
>100_bases CGGGTACAGAGCAAGAACAAGAGCGACTGGCTGCATTAAAACAGTATCGTATTGCATTGATGCGACTTGATATTAATGAG CAGTGGCCGGTGTTGCCTGC
Downstream 100 bases:
>100_bases TATTGTGATGTTGGCGCTTGACGGCGAAGCTATTCCGCTAAAAAACATCATTGTGACGCTCTCTATGTCAATACAAGACA AAGACCAAAGCGGGCAGGCC
Product: putative bacteriophage protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTWHKSTLRIPKNLAPVSCSTVAVHPWAFGVGQTEKSGSFLSPANAINALASRLAGADSDQDVLILLITAKTLAEFITLL TAAAEVFPIPSLTQVQRRAKAALSLDSSKMQIPAKPGGLPASAPLSVATTRQASGAQALQKAISDTAAGSSSAAIGTALA AFAQQRAAMLAEVMSGLEQLQGASVPVWSLAVDGNTQTAIAEMKKEIPDSQAIFSLALLFVGADLAPLRAMVVNHD
Sequences:
>Translated_236_residues MTWHKSTLRIPKNLAPVSCSTVAVHPWAFGVGQTEKSGSFLSPANAINALASRLAGADSDQDVLILLITAKTLAEFITLL TAAAEVFPIPSLTQVQRRAKAALSLDSSKMQIPAKPGGLPASAPLSVATTRQASGAQALQKAISDTAAGSSSAAIGTALA AFAQQRAAMLAEVMSGLEQLQGASVPVWSLAVDGNTQTAIAEMKKEIPDSQAIFSLALLFVGADLAPLRAMVVNHD >Mature_235_residues TWHKSTLRIPKNLAPVSCSTVAVHPWAFGVGQTEKSGSFLSPANAINALASRLAGADSDQDVLILLITAKTLAEFITLLT AAAEVFPIPSLTQVQRRAKAALSLDSSKMQIPAKPGGLPASAPLSVATTRQASGAQALQKAISDTAAGSSSAAIGTALAA FAQQRAAMLAEVMSGLEQLQGASVPVWSLAVDGNTQTAIAEMKKEIPDSQAIFSLALLFVGADLAPLRAMVVNHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24297; Mature: 24166
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWHKSTLRIPKNLAPVSCSTVAVHPWAFGVGQTEKSGSFLSPANAINALASRLAGADSD CCCCCCHHCCCCCCCCCCCCEEEECCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC QDVLILLITAKTLAEFITLLTAAAEVFPIPSLTQVQRRAKAALSLDSSKMQIPAKPGGLP CCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCC ASAPLSVATTRQASGAQALQKAISDTAAGSSSAAIGTALAAFAQQRAAMLAEVMSGLEQL CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGASVPVWSLAVDGNTQTAIAEMKKEIPDSQAIFSLALLFVGADLAPLRAMVVNHD CCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCC >Mature Secondary Structure TWHKSTLRIPKNLAPVSCSTVAVHPWAFGVGQTEKSGSFLSPANAINALASRLAGADSD CCCCCHHCCCCCCCCCCCCEEEECCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC QDVLILLITAKTLAEFITLLTAAAEVFPIPSLTQVQRRAKAALSLDSSKMQIPAKPGGLP CCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCC ASAPLSVATTRQASGAQALQKAISDTAAGSSSAAIGTALAAFAQQRAAMLAEVMSGLEQL CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGASVPVWSLAVDGNTQTAIAEMKKEIPDSQAIFSLALLFVGADLAPLRAMVVNHD CCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA