| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023175
Identifier: 170023175
GI number: 170023175
Start: 1046941
End: 1048638
Strand: Reverse
Name: 170023175
Synonym: YPK_0926
Alternate gene names: NA
Gene position: 1048638-1046941 (Counterclockwise)
Preceding gene: 170023176
Following gene: 170023146
Centisome position: 22.36
GC content: 55.71
Gene sequence:
>1698_bases ATGAAATCCGTTGTCACGCTGAGGGTCGGTGATGATGTGATTGCTGCAAATAAATTAAATCTTTCACTTTCGTTAAACGG CTGTGGGATGGGGTTTGTTACAGCAATAACGGATCGGGACTGTACTGGCGAGCTGGTGCGGCTGGATTTGGGTTATAACA CATCAATATATCGCTGGCTGACGGGATTTGTTGAACGTAGCGCGCCGGCTGAAAATGGCGCACAACGATTAATGGTGCGC GAGCTGGTCGGCGTGTTCGAACGTTCGTGTCCGTGCTCACTGCAACACCCTACATTACGCGACGTCACCGAGGCTATCGG CGCGGCAACGAATATGCGGTTTGTCTTGCCCGCCGGCACGGCTTATACAGACACCCCGATCCCCCATTTTCAACACAATG GCAGTGGTTATCTGCTTTTAAAGGATTTGGGCCGCGCGTTCAGTATTCCGGATTATTGCTGGTACCAGCTGCCAGACGGA ACGGTTTATGTCGGCAGTTATGCAGACTCCCGTTTTGCATTGACGCCAGTCGATATCCCGCCGGAATTCGCCCAGGGCGG TAGCGGCGGTAATAGCCTGGAATTGCCGCTTATCCCTGCCATTCGTCCCGGCGTGATTGTTAATGGCCGGCGCATCACTA GAGTTGATGTAAGTCATGACACTATGACCTTGATCTGGACGCCGCTCGACAGCCAGGGCCAGCCGGCACAGAAAACAGCA GAGCAGCGCCAGATTGATAAAATTTACCCAGAGCTGGGCGCGGGCTTACATTTGCCCCGTCTGGCGCGGGTGATGAGTCC GACAGATGCGGCTGAGCTGGGCGACCCGTCAGACCCCTTTCGCCCGCGTTACGCTGTCAACGTTCAGTTACTTGACGAGA ACGGCAACGCCGCCGCCGGCGCACAGGAATATAACGCGGTACCGCTACCGGTACCGATGGCTGGCAGTGAGGGCGGCATG TTCCAGTTCCCGTCAGAGGGGACATTGGTAGAAATTGGTTTTGCGGATGGCCGGCCAGATAAGCCGATGATCCGGCAAAC GCTGTCTGAAGGACTATCACTACCCGCCGTCAAGCCAGGCGAGCAGTTGCAGCAACAGCGCGCCGGCGTCAGTCAGCGCG TGACGGTAGACGGCAGTTGGCAGCGTGATACCGATCAGGCGATCGAGGAAACCAGTAGCCGGCGCAGCGTGACCAGCGAC GAGGAAAACCGCACTACCACAACCCGCAGTGCCACGATAAAAGCCAATGACAGCACTACAGTTTTGGGGACTAAAACACT CATGGCCGGCCAGGTGGTGCAACTTGCCGAGGGTGACTACTCAATAGGGACATCGGCCAATATGTTGACCAAGGTCGGCA AAGACAGAACTGACGATGTTGGCCATAACCAAAATGTCACGGTTGGCCAGGACCAGACTACTGATATCGGCGGGGCGCTC ACTGAGAAAATCGCCGGTATTCGTCGCAGTGTTGCCGCCGCGCAGGAACTGATCGCCCCGTCAGTTCGTTTGGGTACTGA TGAAGTTAACGTGTTGACGCTGCTCACTGATACGCTTGATGTCATACAAACGCTGGCACAGCAGACAGCAAATCACACGC ACAACAACACCGGCGGTCCGCTTAACGCGGGTGATTTTACTGCCACCGCAAATCGCGCATCATCACTCGCTGTCAAGTAC GGCCCGTTCATCGCTTAA
Upstream 100 bases:
>100_bases CCGCCGGCGCGGCAGACGGTGAAACAGCAGAAACCCGCACGTGGTTTGAAAGTGTGCTGCAAAAAGTCGATAACGCTATC GGTCCCGCCGGGGGTGAAGC
Downstream 100 bases:
>100_bases CCACTCGACTGCAGCACAGACGTAAATGTCTGTGCTCGACACCCAGGCAATAAACCCGCAGCAATCACCCCCCATAAAAC ACGCTCAGAGCCTCACCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MKSVVTLRVGDDVIAANKLNLSLSLNGCGMGFVTAITDRDCTGELVRLDLGYNTSIYRWLTGFVERSAPAENGAQRLMVR ELVGVFERSCPCSLQHPTLRDVTEAIGAATNMRFVLPAGTAYTDTPIPHFQHNGSGYLLLKDLGRAFSIPDYCWYQLPDG TVYVGSYADSRFALTPVDIPPEFAQGGSGGNSLELPLIPAIRPGVIVNGRRITRVDVSHDTMTLIWTPLDSQGQPAQKTA EQRQIDKIYPELGAGLHLPRLARVMSPTDAAELGDPSDPFRPRYAVNVQLLDENGNAAAGAQEYNAVPLPVPMAGSEGGM FQFPSEGTLVEIGFADGRPDKPMIRQTLSEGLSLPAVKPGEQLQQQRAGVSQRVTVDGSWQRDTDQAIEETSSRRSVTSD EENRTTTTRSATIKANDSTTVLGTKTLMAGQVVQLAEGDYSIGTSANMLTKVGKDRTDDVGHNQNVTVGQDQTTDIGGAL TEKIAGIRRSVAAAQELIAPSVRLGTDEVNVLTLLTDTLDVIQTLAQQTANHTHNNTGGPLNAGDFTATANRASSLAVKY GPFIA
Sequences:
>Translated_565_residues MKSVVTLRVGDDVIAANKLNLSLSLNGCGMGFVTAITDRDCTGELVRLDLGYNTSIYRWLTGFVERSAPAENGAQRLMVR ELVGVFERSCPCSLQHPTLRDVTEAIGAATNMRFVLPAGTAYTDTPIPHFQHNGSGYLLLKDLGRAFSIPDYCWYQLPDG TVYVGSYADSRFALTPVDIPPEFAQGGSGGNSLELPLIPAIRPGVIVNGRRITRVDVSHDTMTLIWTPLDSQGQPAQKTA EQRQIDKIYPELGAGLHLPRLARVMSPTDAAELGDPSDPFRPRYAVNVQLLDENGNAAAGAQEYNAVPLPVPMAGSEGGM FQFPSEGTLVEIGFADGRPDKPMIRQTLSEGLSLPAVKPGEQLQQQRAGVSQRVTVDGSWQRDTDQAIEETSSRRSVTSD EENRTTTTRSATIKANDSTTVLGTKTLMAGQVVQLAEGDYSIGTSANMLTKVGKDRTDDVGHNQNVTVGQDQTTDIGGAL TEKIAGIRRSVAAAQELIAPSVRLGTDEVNVLTLLTDTLDVIQTLAQQTANHTHNNTGGPLNAGDFTATANRASSLAVKY GPFIA >Mature_565_residues MKSVVTLRVGDDVIAANKLNLSLSLNGCGMGFVTAITDRDCTGELVRLDLGYNTSIYRWLTGFVERSAPAENGAQRLMVR ELVGVFERSCPCSLQHPTLRDVTEAIGAATNMRFVLPAGTAYTDTPIPHFQHNGSGYLLLKDLGRAFSIPDYCWYQLPDG TVYVGSYADSRFALTPVDIPPEFAQGGSGGNSLELPLIPAIRPGVIVNGRRITRVDVSHDTMTLIWTPLDSQGQPAQKTA EQRQIDKIYPELGAGLHLPRLARVMSPTDAAELGDPSDPFRPRYAVNVQLLDENGNAAAGAQEYNAVPLPVPMAGSEGGM FQFPSEGTLVEIGFADGRPDKPMIRQTLSEGLSLPAVKPGEQLQQQRAGVSQRVTVDGSWQRDTDQAIEETSSRRSVTSD EENRTTTTRSATIKANDSTTVLGTKTLMAGQVVQLAEGDYSIGTSANMLTKVGKDRTDDVGHNQNVTVGQDQTTDIGGAL TEKIAGIRRSVAAAQELIAPSVRLGTDEVNVLTLLTDTLDVIQTLAQQTANHTHNNTGGPLNAGDFTATANRASSLAVKY GPFIA
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60538; Mature: 60538
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSVVTLRVGDDVIAANKLNLSLSLNGCGMGFVTAITDRDCTGELVRLDLGYNTSIYRWL CCCEEEEEECCCEEEEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHH TGFVERSAPAENGAQRLMVRELVGVFERSCPCSLQHPTLRDVTEAIGAATNMRFVLPAGT HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCC AYTDTPIPHFQHNGSGYLLLKDLGRAFSIPDYCWYQLPDGTVYVGSYADSRFALTPVDIP CCCCCCCCCEEECCCCEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEEECCCC PEFAQGGSGGNSLELPLIPAIRPGVIVNGRRITRVDVSHDTMTLIWTPLDSQGQPAQKTA HHHHCCCCCCCEEEECCCCCCCCCEEECCCEEEEEECCCCEEEEEEECCCCCCCCHHHHH EQRQIDKIYPELGAGLHLPRLARVMSPTDAAELGDPSDPFRPRYAVNVQLLDENGNAAAG HHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHCCCCCCCCCCEEEEEEEEEECCCCCCCC AQEYNAVPLPVPMAGSEGGMFQFPSEGTLVEIGFADGRPDKPMIRQTLSEGLSLPAVKPG CHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCH EQLQQQRAGVSQRVTVDGSWQRDTDQAIEETSSRRSVTSDEENRTTTTRSATIKANDSTT HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCEE VLGTKTLMAGQVVQLAEGDYSIGTSANMLTKVGKDRTDDVGHNQNVTVGQDQTTDIGGAL EEEEHHHHHCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCHHH TEKIAGIRRSVAAAQELIAPSVRLGTDEVNVLTLLTDTLDVIQTLAQQTANHTHNNTGGP HHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCC LNAGDFTATANRASSLAVKYGPFIA CCCCCCEEECCCCCCEEEECCCCCC >Mature Secondary Structure MKSVVTLRVGDDVIAANKLNLSLSLNGCGMGFVTAITDRDCTGELVRLDLGYNTSIYRWL CCCEEEEEECCCEEEEEEEEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCHHHHHH TGFVERSAPAENGAQRLMVRELVGVFERSCPCSLQHPTLRDVTEAIGAATNMRFVLPAGT HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCC AYTDTPIPHFQHNGSGYLLLKDLGRAFSIPDYCWYQLPDGTVYVGSYADSRFALTPVDIP CCCCCCCCCEEECCCCEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEEECCCC PEFAQGGSGGNSLELPLIPAIRPGVIVNGRRITRVDVSHDTMTLIWTPLDSQGQPAQKTA HHHHCCCCCCCEEEECCCCCCCCCEEECCCEEEEEECCCCEEEEEEECCCCCCCCHHHHH EQRQIDKIYPELGAGLHLPRLARVMSPTDAAELGDPSDPFRPRYAVNVQLLDENGNAAAG HHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHCCCCCCCCCCEEEEEEEEEECCCCCCCC AQEYNAVPLPVPMAGSEGGMFQFPSEGTLVEIGFADGRPDKPMIRQTLSEGLSLPAVKPG CHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCH EQLQQQRAGVSQRVTVDGSWQRDTDQAIEETSSRRSVTSDEENRTTTTRSATIKANDSTT HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCEE VLGTKTLMAGQVVQLAEGDYSIGTSANMLTKVGKDRTDDVGHNQNVTVGQDQTTDIGGAL EEEEHHHHHCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCHHH TEKIAGIRRSVAAAQELIAPSVRLGTDEVNVLTLLTDTLDVIQTLAQQTANHTHNNTGGP HHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCC LNAGDFTATANRASSLAVKYGPFIA CCCCCCEEECCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA