| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023167
Identifier: 170023167
GI number: 170023167
Start: 1035830
End: 1037485
Strand: Direct
Name: 170023167
Synonym: YPK_0918
Alternate gene names: NA
Gene position: 1035830-1037485 (Clockwise)
Preceding gene: 170023166
Following gene: 170023168
Centisome position: 22.09
GC content: 57.43
Gene sequence:
>1656_bases ATGAAACCTATCCGCAGGCTGATGCTGTCCGGCGATACGGTGCCGCTGGTTGATGCCACTCTGGTGCTGGAGCTGAACGC CTGCGGGCGCGGCTTTATCACCGCTGAAACCACTACAGATTACACCGGCAAACTGGTACGGCTGGATGCGGGTTACCCTG AATTGGTATTGCGCTGGTTTACCGGTTATGTGGAGCGTTCGCAACCGGCAGAGAACGGCGCACAGCGGCTATTTGTGCGT GAGTTAACCGGTATTTTTGAGCGTATGTGGCCGGTATCGATGCAACACCCGACCCTGCGCCAGTTGGCCGACTGGCTGAC CGATAACAGCGGGCTGACGTTCCAGCTTGCCGCCAGCGCTGACTATAACGATAAGCCAATCCCGCATTTTACCCACAGCG GCAGTGGTTATCAGTTGTTGGCCAATATCGGCAACGCCTTTGGTATCGTGGATTATGTCTGGTACCAGTTACCCGACGGC GCGGTCTATGTGGGCAGTTGGCAGCATTCATTGTTCGCCGGTAAACCGATAGATATCCCGTCAGAATTCAGCACCGCAGC GGCGGCAGGCAATACCATGACCGTGCCTATGATCCAATCGGTGCGCCCCGGCGTGGAATTGAATGGCCAGCGGTTAACCA CTGTTCGGCTGAATAATGATGATTTGGTGTTAACGTGGACGCCGCGTAATAAAACCACCGGCCAACCGTTGCAGAAAACC CCCATCCAGCGCCAGATTGATAATGCTTACCCGGAGTTATCAGCCGGGTTGCATCTGCCGAAAATGGCCCGTGTTGAGGG GCCAAGCGAGGCGGTGACCTGCGGTGATATGGCCGACCCGTTCCGGCCCCGCTATGCCGTGAATCTGCAATTGCTGGATG ATGATGGTCAGGCCGCAGCGGATACGCCGGTTTACCCTGCGGTGCCGCTTCCCCTGCCGATGGCGGGGGCGGAGTCGGGC ATGTTCCAGTTCCCGCCAGCGGGTACCTTAGTGGAAGTGGGCTTTACTGGCGGCAGGCCGGATAAACCCTTTGTGCGTCA GACGCTATCACAGGGCAATAACCTGCCCACCGTGCAGCCGGGTGAGCAACTACAGCAACAGCGCGCCGGAGTATCGCAGC GGGTGACGGTGGCAGGGGACTGGGAGCGCAAAACCGATCAGGTGATCCGTGAGGAATCAATGAGCCGGGTGATTACCGCC GATGATGAAACCCGCACACTGGTGGTCAGAGAAACCACGGTTCAGGCTACCGATAAAACCACGGTACTGGGAACGGCCAC CTTACTGGCCGGTGCTATCCAGCAGATTAGTGAGGGGGATTACAGTCTGGCGACCCAAGCCAGTTACATGGCCAAAGTGG GCAAAACCTTAACCACCGATGTGGGGCAGGACTTGATAGAGAAGATTGGTAATATCCGCAGTAGCATCGCCGCCGCCCGG CAGGATGTGATAGCGCCGGTAGTATGGATGGGTAGCCAGCAGATTAACGTGATGGCCCTCATGCTGGATACGCTGGATGT GGTGAAAGAGCTGGCAGCACTGACCGCAGCACACACCCATACCAATACTGATGGCCCGCTGAACGCCGGGAGTATCACCG CCACCGGGGCCAAGTCTGATGGATTACGCAGTAAATATTCCCCTGTGATCGGCTAA
Upstream 100 bases:
>100_bases GTGGGGCCGCAGGCAGTGAGGCGGGCGAGGATGCCGAGCAGTTAAGCTGGTTTGAGCGCAAGGTGTTGAAGCCCGTCAAT GATGCACTGGGGCCAGACTC
Downstream 100 bases:
>100_bases TCGATCTCGCCTAATCTGCCCGCCGCGCGCGGGCTTTTTTACGCCTATCCAAAAGCACCGCCAGCAGCCCAACACGCCAC GCAATAAACCCACCATTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MKPIRRLMLSGDTVPLVDATLVLELNACGRGFITAETTTDYTGKLVRLDAGYPELVLRWFTGYVERSQPAENGAQRLFVR ELTGIFERMWPVSMQHPTLRQLADWLTDNSGLTFQLAASADYNDKPIPHFTHSGSGYQLLANIGNAFGIVDYVWYQLPDG AVYVGSWQHSLFAGKPIDIPSEFSTAAAAGNTMTVPMIQSVRPGVELNGQRLTTVRLNNDDLVLTWTPRNKTTGQPLQKT PIQRQIDNAYPELSAGLHLPKMARVEGPSEAVTCGDMADPFRPRYAVNLQLLDDDGQAAADTPVYPAVPLPLPMAGAESG MFQFPPAGTLVEVGFTGGRPDKPFVRQTLSQGNNLPTVQPGEQLQQQRAGVSQRVTVAGDWERKTDQVIREESMSRVITA DDETRTLVVRETTVQATDKTTVLGTATLLAGAIQQISEGDYSLATQASYMAKVGKTLTTDVGQDLIEKIGNIRSSIAAAR QDVIAPVVWMGSQQINVMALMLDTLDVVKELAALTAAHTHTNTDGPLNAGSITATGAKSDGLRSKYSPVIG
Sequences:
>Translated_551_residues MKPIRRLMLSGDTVPLVDATLVLELNACGRGFITAETTTDYTGKLVRLDAGYPELVLRWFTGYVERSQPAENGAQRLFVR ELTGIFERMWPVSMQHPTLRQLADWLTDNSGLTFQLAASADYNDKPIPHFTHSGSGYQLLANIGNAFGIVDYVWYQLPDG AVYVGSWQHSLFAGKPIDIPSEFSTAAAAGNTMTVPMIQSVRPGVELNGQRLTTVRLNNDDLVLTWTPRNKTTGQPLQKT PIQRQIDNAYPELSAGLHLPKMARVEGPSEAVTCGDMADPFRPRYAVNLQLLDDDGQAAADTPVYPAVPLPLPMAGAESG MFQFPPAGTLVEVGFTGGRPDKPFVRQTLSQGNNLPTVQPGEQLQQQRAGVSQRVTVAGDWERKTDQVIREESMSRVITA DDETRTLVVRETTVQATDKTTVLGTATLLAGAIQQISEGDYSLATQASYMAKVGKTLTTDVGQDLIEKIGNIRSSIAAAR QDVIAPVVWMGSQQINVMALMLDTLDVVKELAALTAAHTHTNTDGPLNAGSITATGAKSDGLRSKYSPVIG >Mature_551_residues MKPIRRLMLSGDTVPLVDATLVLELNACGRGFITAETTTDYTGKLVRLDAGYPELVLRWFTGYVERSQPAENGAQRLFVR ELTGIFERMWPVSMQHPTLRQLADWLTDNSGLTFQLAASADYNDKPIPHFTHSGSGYQLLANIGNAFGIVDYVWYQLPDG AVYVGSWQHSLFAGKPIDIPSEFSTAAAAGNTMTVPMIQSVRPGVELNGQRLTTVRLNNDDLVLTWTPRNKTTGQPLQKT PIQRQIDNAYPELSAGLHLPKMARVEGPSEAVTCGDMADPFRPRYAVNLQLLDDDGQAAADTPVYPAVPLPLPMAGAESG MFQFPPAGTLVEVGFTGGRPDKPFVRQTLSQGNNLPTVQPGEQLQQQRAGVSQRVTVAGDWERKTDQVIREESMSRVITA DDETRTLVVRETTVQATDKTTVLGTATLLAGAIQQISEGDYSLATQASYMAKVGKTLTTDVGQDLIEKIGNIRSSIAAAR QDVIAPVVWMGSQQINVMALMLDTLDVVKELAALTAAHTHTNTDGPLNAGSITATGAKSDGLRSKYSPVIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59666; Mature: 59666
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPIRRLMLSGDTVPLVDATLVLELNACGRGFITAETTTDYTGKLVRLDAGYPELVLRWF CCHHHHHHHCCCCEEEEEEEEEEEECCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHH TGYVERSQPAENGAQRLFVRELTGIFERMWPVSMQHPTLRQLADWLTDNSGLTFQLAASA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEECC DYNDKPIPHFTHSGSGYQLLANIGNAFGIVDYVWYQLPDGAVYVGSWQHSLFAGKPIDIP CCCCCCCCCEECCCCCHHHHHHHCCHHHHHHHHHEECCCCEEEEECCCCHHCCCCCCCCC SEFSTAAAAGNTMTVPMIQSVRPGVELNGQRLTTVRLNNDDLVLTWTPRNKTTGQPLQKT CCHHHHHHCCCEEEEHHHHHCCCCCEECCCEEEEEEECCCCEEEEECCCCCCCCCCHHHC PIQRQIDNAYPELSAGLHLPKMARVEGPSEAVTCGDMADPFRPRYAVNLQLLDDDGQAAA CHHHHHHHCCCHHHCCCCCCHHHCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCCC DTPVYPAVPLPLPMAGAESGMFQFPPAGTLVEVGFTGGRPDKPFVRQTLSQGNNLPTVQP CCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCC GEQLQQQRAGVSQRVTVAGDWERKTDQVIREESMSRVITADDETRTLVVRETTVQATDKT HHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCEEEECCCCCEEEEEEEEEEECCCCE TVLGTATLLAGAIQQISEGDYSLATQASYMAKVGKTLTTDVGQDLIEKIGNIRSSIAAAR EEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH QDVIAPVVWMGSQQINVMALMLDTLDVVKELAALTAAHTHTNTDGPLNAGSITATGAKSD HHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCC GLRSKYSPVIG CCCCCCCCCCC >Mature Secondary Structure MKPIRRLMLSGDTVPLVDATLVLELNACGRGFITAETTTDYTGKLVRLDAGYPELVLRWF CCHHHHHHHCCCCEEEEEEEEEEEECCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHH TGYVERSQPAENGAQRLFVRELTGIFERMWPVSMQHPTLRQLADWLTDNSGLTFQLAASA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEECC DYNDKPIPHFTHSGSGYQLLANIGNAFGIVDYVWYQLPDGAVYVGSWQHSLFAGKPIDIP CCCCCCCCCEECCCCCHHHHHHHCCHHHHHHHHHEECCCCEEEEECCCCHHCCCCCCCCC SEFSTAAAAGNTMTVPMIQSVRPGVELNGQRLTTVRLNNDDLVLTWTPRNKTTGQPLQKT CCHHHHHHCCCEEEEHHHHHCCCCCEECCCEEEEEEECCCCEEEEECCCCCCCCCCHHHC PIQRQIDNAYPELSAGLHLPKMARVEGPSEAVTCGDMADPFRPRYAVNLQLLDDDGQAAA CHHHHHHHCCCHHHCCCCCCHHHCCCCCCCCEEECCCCCCCCCCEEEEEEEECCCCCCCC DTPVYPAVPLPLPMAGAESGMFQFPPAGTLVEVGFTGGRPDKPFVRQTLSQGNNLPTVQP CCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCCC GEQLQQQRAGVSQRVTVAGDWERKTDQVIREESMSRVITADDETRTLVVRETTVQATDKT HHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCEEEECCCCCEEEEEEEEEEECCCCE TVLGTATLLAGAIQQISEGDYSLATQASYMAKVGKTLTTDVGQDLIEKIGNIRSSIAAAR EEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH QDVIAPVVWMGSQQINVMALMLDTLDVVKELAALTAAHTHTNTDGPLNAGSITATGAKSD HHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCC GLRSKYSPVIG CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA