| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023162
Identifier: 170023162
GI number: 170023162
Start: 1031744
End: 1032379
Strand: Direct
Name: 170023162
Synonym: YPK_0913
Alternate gene names: NA
Gene position: 1031744-1032379 (Clockwise)
Preceding gene: 170023161
Following gene: 170023163
Centisome position: 22.0
GC content: 52.04
Gene sequence:
>636_bases ATGCCTGATTTCATTAGCCGATTAACAAGCCTGCGCCTGCCGTCATGGATGGATAAAGGCGAGGCTAACAAGTTATTACA GGTGTGCCGCCAGCACTGGCAGTGGGTTAATGGCTGGCTGAATTGGCCGCTTAATCAGTTTGATGCCGCCACCTGCGCGG TGCCGTTGTTGAACGTGTTGGCCTATCAGCGCGATATCAACCGCTTTAACGGTGAGCCGTTGAGCCTGTTTCGTAAGCGA GTGCAATACGCTTTTATTAACGCCGCTGATGCCGGTTCAGTCGCGGGATTCAGCGCCATCTTTAAGCGGTTAGATATTGG TGTGATAACGCAACTGGAGCGCCAGCCGGGCCATGACTGGGACGTCATTCTTATCCGGGTGAATGATAACCAGATAGCGG AAAACAACACGTTGATGATGGCGCTGATCCGCCAGTATGGCCGCACATGCCGTCGCTACATTTTCCAAGTGCTCAACGCC AGAACAGTGACGATGCACTGTGGGGAATTCAGCAACGAATACCGCAACCACCACGCAAAATTAATGATCGCACCCGGCAC GATTAAGGGCGCGGTGGCAGTGATACCCACCCAGTTACAGCATTCGCATGAAATCTATGCGGCAAAATTGAAATAA
Upstream 100 bases:
>100_bases AAGACGTTTTCACTGATTGAGTCATTGAGTTTTTCACTGACGGACATTGTGAGTGAACTCAGTGTGCCGCGCCTGAACAG CGTAACGGTGGTAATTGAAA
Downstream 100 bases:
>100_bases GGATATTGATATGGCAACGGTGATTACCCGCGCATTTGAACACTGGCAAGCGGGGCAGGTGTTAAATAACTTACCGGCCC GCCCGGATACCATTATTTTT
Product: phage-like protein
Products: NA
Alternate protein names: Phage-Like Protein; Bacteriophage Protein; Hemolysins-Like Protein Containing CBS Domains
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MPDFISRLTSLRLPSWMDKGEANKLLQVCRQHWQWVNGWLNWPLNQFDAATCAVPLLNVLAYQRDINRFNGEPLSLFRKR VQYAFINAADAGSVAGFSAIFKRLDIGVITQLERQPGHDWDVILIRVNDNQIAENNTLMMALIRQYGRTCRRYIFQVLNA RTVTMHCGEFSNEYRNHHAKLMIAPGTIKGAVAVIPTQLQHSHEIYAAKLK
Sequences:
>Translated_211_residues MPDFISRLTSLRLPSWMDKGEANKLLQVCRQHWQWVNGWLNWPLNQFDAATCAVPLLNVLAYQRDINRFNGEPLSLFRKR VQYAFINAADAGSVAGFSAIFKRLDIGVITQLERQPGHDWDVILIRVNDNQIAENNTLMMALIRQYGRTCRRYIFQVLNA RTVTMHCGEFSNEYRNHHAKLMIAPGTIKGAVAVIPTQLQHSHEIYAAKLK >Mature_210_residues PDFISRLTSLRLPSWMDKGEANKLLQVCRQHWQWVNGWLNWPLNQFDAATCAVPLLNVLAYQRDINRFNGEPLSLFRKRV QYAFINAADAGSVAGFSAIFKRLDIGVITQLERQPGHDWDVILIRVNDNQIAENNTLMMALIRQYGRTCRRYIFQVLNAR TVTMHCGEFSNEYRNHHAKLMIAPGTIKGAVAVIPTQLQHSHEIYAAKLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24235; Mature: 24104
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDFISRLTSLRLPSWMDKGEANKLLQVCRQHWQWVNGWLNWPLNQFDAATCAVPLLNVL CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AYQRDINRFNGEPLSLFRKRVQYAFINAADAGSVAGFSAIFKRLDIGVITQLERQPGHDW HHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCE DVILIRVNDNQIAENNTLMMALIRQYGRTCRRYIFQVLNARTVTMHCGEFSNEYRNHHAK EEEEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCEE LMIAPGTIKGAVAVIPTQLQHSHEIYAAKLK EEECCCCCCCHHEEECHHHHHCCHHEEEECC >Mature Secondary Structure PDFISRLTSLRLPSWMDKGEANKLLQVCRQHWQWVNGWLNWPLNQFDAATCAVPLLNVL CHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AYQRDINRFNGEPLSLFRKRVQYAFINAADAGSVAGFSAIFKRLDIGVITQLERQPGHDW HHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCHHHHHHHHCCCCCCE DVILIRVNDNQIAENNTLMMALIRQYGRTCRRYIFQVLNARTVTMHCGEFSNEYRNHHAK EEEEEEECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCEE LMIAPGTIKGAVAVIPTQLQHSHEIYAAKLK EEECCCCCCCHHEEECHHHHHCCHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA