| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023159
Identifier: 170023159
GI number: 170023159
Start: 1028266
End: 1030242
Strand: Direct
Name: 170023159
Synonym: YPK_0910
Alternate gene names: NA
Gene position: 1028266-1030242 (Clockwise)
Preceding gene: 170023158
Following gene: 170023160
Centisome position: 21.93
GC content: 50.68
Gene sequence:
>1977_bases ATGAAAAGTCTCGATTTTACCTTAAGCATGATTGATAAAATCACACGGCCATTAAAATCCGTGCAAGCCTCTGTAAAAGG ATTTGCGGAAAGTTCTCAGGCGGCTTTCGGTAAAATTGCCATTGGCGGGGCCGCGCTGTTCGGTGTCGTACAGGGAATGA AGGGCGCACTGGGACCCGCAGCTGAATTTGCCGGCGCGCTTAATGAGGCCAGCGCCAAGGGCGTGAGTGATAGCGCCTTG CAAAAGATGAGCGCTGACGCCCTGAAATTCAGTATGCAGTATGGCCGCAGCGCCGTGGATGTTGTGCGTTCAAGTGCAGA CGTGCGCAGTGCAATCGGTACGCTGTCGGACCGGGATTTGCCCCGCTTCACCCTGGCCACCAATGTGTTGGCCGCTGGCA TGAAAACCACTGGCAGCGAAGCCGCCGCCTACATGGGGCAAATGTATAACCAATTTGACAGCTACGCCGCCCGCATAGGT AAAGTGAAGTTTGCCGAAGAGGTGGCCGGTAAAACGGCATATATGGCGCAGTCATTTGGCGTCAGTATGCAGACTATGGC TGACTTGATGGCCGGTTCAAAAGGGGTTGGCGCTAACTACGGTGTCGGCATTGATGAGCAATTTGCCGTATTGGGTCAGT TACAAAAAACCTTAGGAACCGAAGCCAGCGGCAGTTATGAAAACTTTATGAAGGGGGCCGCAGACGGTGCAAAAACGCTG GGGTTGAGCTTTGTGAATGCCTCCGGTCAGATGCTGACCATGCCGGAAATGCTGGATAAGTTACAAGGCCGCTACGGTAA AACCATTGAGGGCAATTTAAAGGCACAGGCCGAGCTGGATAAAGCCTTTGGTGATGGTGCCAATGTTATTAAACAGCTAT ACGGCAATGTCGATTTACTGAAACGCAATATCGGTGAGCTGGGCAGTAATGACGGGATGAAACGGGCCGGTGAGATGGCC AAGAAAATGGCCGACCCATGGGAACGGCTGATGGCTATCTGGACGGGAATGCGGGTAATTTTGGGCTTAACCCTGTTACC TGTGCTGTATCCCATCATGAACCGCGTGTCTGAAATCGGCGAGAGGTTCGCCCGCTGGATGCAGTTATTCCCCAATATCG CGCGGCTGATCGGTTATGCCATGCTGGCGTTGCTGAGTTTTGCCGCTGCCGGGGCCATCGCCAATATGGTGATGGGGATC AGCATGTTTATCTGGATGGGGTTAAAACTGCTGTGGGGCGCATTGTGTGCGGTGACAAAAATCCACACGGCGGCTATTTG GTTATATAACACGGCAATCATCGCTGTTAACGCCACCATGCGGATTATGCGCGGCGTGTTACTGGCGGTACGTATGGCGG CAATATCGGCGGGCATTTCCTTTAGTTTCATGACATGGCCTATCCTGCTTATCATTGTGGCCATTGCTGCGTTGGCGGCA GGTATTTATTACTTGATTACCTACTGGGATGAGATTAAAGCGGCCATTGCTGACACTGCGGCTTTCCAGTGGTTATCCGG GGTAGTGACCGCAGTTGGGGCCGTATTTAGTGTTGTATGGAAAGGTATTGTTGCTGGGTGGGAGTGGCTGGTATCGGCTA TCACCGGGTTATCACCACTGGCCGGTATCAGTGCCATGGCTGATACCATTGGCAATGTGTTCAGTGGATTATGGGACTGG CTGAAAAGTACCTTTGCCGAAACTTACAATTGGATCATCGATAAACTGAATTATATCCCCGGTGTAAATATTGAGGCGAA AAGTATCCCTTCACAGGAAAGTAGCCCAATCAGTTCAGCCAATAATTTATTAACCGGTGGCCAGATCCAAAATATTGAAA AGGGCGGGATTAATAAAGAAATCAGCAATAACGCCAAAACGGTGACCGATAACAGTAAGCGGTTTGAGAACGTGAATATT AATATGCAGGGTGGCATGACGCCAGAGCAGCTAATGGAATGGCAGGAATTAAATTAA
Upstream 100 bases:
>100_bases TAGAGAGTCTGGCCCGTGCCGTTTGGTTAGATAACCGTTATTGGGATAATACCCGTATTTCTATTGCCAATGGAATTGGT CTGGCATTTAAAGGCGATTA
Downstream 100 bases:
>100_bases TGACGGAATTGATGTATATCGACCTGCTGATAAAAGACGGCGACTTTGTATTAAATACCGGTAATGAACCGACTCTATGC AATAACCGGATTAGCATTGG
Product: TP901 family phage tail tape measure protein
Products: NA
Alternate protein names: Phage Tail Tape Measure Protein Core Region; Tail Tape Measure Protein; Tail Length Determinator; Phage Tail Length Determinator; Tail Tape Measure Protein Bacteriophage Origin; Phage-Related Tail Protein; Prophage; Phage-Like Protein; Phage Gene; Phage Tail Tape Measure Family Protein; Phage Tail Tape Measure Protein Family; Phage Tail Protein; Phage Tail Tape Measure Protein Core Region
Number of amino acids: Translated: 658; Mature: 658
Protein sequence:
>658_residues MKSLDFTLSMIDKITRPLKSVQASVKGFAESSQAAFGKIAIGGAALFGVVQGMKGALGPAAEFAGALNEASAKGVSDSAL QKMSADALKFSMQYGRSAVDVVRSSADVRSAIGTLSDRDLPRFTLATNVLAAGMKTTGSEAAAYMGQMYNQFDSYAARIG KVKFAEEVAGKTAYMAQSFGVSMQTMADLMAGSKGVGANYGVGIDEQFAVLGQLQKTLGTEASGSYENFMKGAADGAKTL GLSFVNASGQMLTMPEMLDKLQGRYGKTIEGNLKAQAELDKAFGDGANVIKQLYGNVDLLKRNIGELGSNDGMKRAGEMA KKMADPWERLMAIWTGMRVILGLTLLPVLYPIMNRVSEIGERFARWMQLFPNIARLIGYAMLALLSFAAAGAIANMVMGI SMFIWMGLKLLWGALCAVTKIHTAAIWLYNTAIIAVNATMRIMRGVLLAVRMAAISAGISFSFMTWPILLIIVAIAALAA GIYYLITYWDEIKAAIADTAAFQWLSGVVTAVGAVFSVVWKGIVAGWEWLVSAITGLSPLAGISAMADTIGNVFSGLWDW LKSTFAETYNWIIDKLNYIPGVNIEAKSIPSQESSPISSANNLLTGGQIQNIEKGGINKEISNNAKTVTDNSKRFENVNI NMQGGMTPEQLMEWQELN
Sequences:
>Translated_658_residues MKSLDFTLSMIDKITRPLKSVQASVKGFAESSQAAFGKIAIGGAALFGVVQGMKGALGPAAEFAGALNEASAKGVSDSAL QKMSADALKFSMQYGRSAVDVVRSSADVRSAIGTLSDRDLPRFTLATNVLAAGMKTTGSEAAAYMGQMYNQFDSYAARIG KVKFAEEVAGKTAYMAQSFGVSMQTMADLMAGSKGVGANYGVGIDEQFAVLGQLQKTLGTEASGSYENFMKGAADGAKTL GLSFVNASGQMLTMPEMLDKLQGRYGKTIEGNLKAQAELDKAFGDGANVIKQLYGNVDLLKRNIGELGSNDGMKRAGEMA KKMADPWERLMAIWTGMRVILGLTLLPVLYPIMNRVSEIGERFARWMQLFPNIARLIGYAMLALLSFAAAGAIANMVMGI SMFIWMGLKLLWGALCAVTKIHTAAIWLYNTAIIAVNATMRIMRGVLLAVRMAAISAGISFSFMTWPILLIIVAIAALAA GIYYLITYWDEIKAAIADTAAFQWLSGVVTAVGAVFSVVWKGIVAGWEWLVSAITGLSPLAGISAMADTIGNVFSGLWDW LKSTFAETYNWIIDKLNYIPGVNIEAKSIPSQESSPISSANNLLTGGQIQNIEKGGINKEISNNAKTVTDNSKRFENVNI NMQGGMTPEQLMEWQELN >Mature_658_residues MKSLDFTLSMIDKITRPLKSVQASVKGFAESSQAAFGKIAIGGAALFGVVQGMKGALGPAAEFAGALNEASAKGVSDSAL QKMSADALKFSMQYGRSAVDVVRSSADVRSAIGTLSDRDLPRFTLATNVLAAGMKTTGSEAAAYMGQMYNQFDSYAARIG KVKFAEEVAGKTAYMAQSFGVSMQTMADLMAGSKGVGANYGVGIDEQFAVLGQLQKTLGTEASGSYENFMKGAADGAKTL GLSFVNASGQMLTMPEMLDKLQGRYGKTIEGNLKAQAELDKAFGDGANVIKQLYGNVDLLKRNIGELGSNDGMKRAGEMA KKMADPWERLMAIWTGMRVILGLTLLPVLYPIMNRVSEIGERFARWMQLFPNIARLIGYAMLALLSFAAAGAIANMVMGI SMFIWMGLKLLWGALCAVTKIHTAAIWLYNTAIIAVNATMRIMRGVLLAVRMAAISAGISFSFMTWPILLIIVAIAALAA GIYYLITYWDEIKAAIADTAAFQWLSGVVTAVGAVFSVVWKGIVAGWEWLVSAITGLSPLAGISAMADTIGNVFSGLWDW LKSTFAETYNWIIDKLNYIPGVNIEAKSIPSQESSPISSANNLLTGGQIQNIEKGGINKEISNNAKTVTDNSKRFENVNI NMQGGMTPEQLMEWQELN
Specific function: Unknown
COG id: COG5283
COG function: function code S; Phage-related tail protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70421; Mature: 70421
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLDFTLSMIDKITRPLKSVQASVKGFAESSQAAFGKIAIGGAALFGVVQGMKGALGPA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AEFAGALNEASAKGVSDSALQKMSADALKFSMQYGRSAVDVVRSSADVRSAIGTLSDRDL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC PRFTLATNVLAAGMKTTGSEAAAYMGQMYNQFDSYAARIGKVKFAEEVAGKTAYMAQSFG CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC VSMQTMADLMAGSKGVGANYGVGIDEQFAVLGQLQKTLGTEASGSYENFMKGAADGAKTL CHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHH GLSFVNASGQMLTMPEMLDKLQGRYGKTIEGNLKAQAELDKAFGDGANVIKQLYGNVDLL HHHEECCCCCEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHH KRNIGELGSNDGMKRAGEMAKKMADPWERLMAIWTGMRVILGLTLLPVLYPIMNRVSEIG HHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERFARWMQLFPNIARLIGYAMLALLSFAAAGAIANMVMGISMFIWMGLKLLWGALCAVTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHTAAIWLYNTAIIAVNATMRIMRGVLLAVRMAAISAGISFSFMTWPILLIIVAIAALAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH GIYYLITYWDEIKAAIADTAAFQWLSGVVTAVGAVFSVVWKGIVAGWEWLVSAITGLSPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AGISAMADTIGNVFSGLWDWLKSTFAETYNWIIDKLNYIPGVNIEAKSIPSQESSPISSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH NNLLTGGQIQNIEKGGINKEISNNAKTVTDNSKRFENVNINMQGGMTPEQLMEWQELN CCCCCCCCCCCCHHCCCCCHHCCCCCCCCCCCHHHCEEEEEECCCCCHHHHHHHHCCC >Mature Secondary Structure MKSLDFTLSMIDKITRPLKSVQASVKGFAESSQAAFGKIAIGGAALFGVVQGMKGALGPA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AEFAGALNEASAKGVSDSALQKMSADALKFSMQYGRSAVDVVRSSADVRSAIGTLSDRDL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC PRFTLATNVLAAGMKTTGSEAAAYMGQMYNQFDSYAARIGKVKFAEEVAGKTAYMAQSFG CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC VSMQTMADLMAGSKGVGANYGVGIDEQFAVLGQLQKTLGTEASGSYENFMKGAADGAKTL CHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHH GLSFVNASGQMLTMPEMLDKLQGRYGKTIEGNLKAQAELDKAFGDGANVIKQLYGNVDLL HHHEECCCCCEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCHHHH KRNIGELGSNDGMKRAGEMAKKMADPWERLMAIWTGMRVILGLTLLPVLYPIMNRVSEIG HHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ERFARWMQLFPNIARLIGYAMLALLSFAAAGAIANMVMGISMFIWMGLKLLWGALCAVTK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IHTAAIWLYNTAIIAVNATMRIMRGVLLAVRMAAISAGISFSFMTWPILLIIVAIAALAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH GIYYLITYWDEIKAAIADTAAFQWLSGVVTAVGAVFSVVWKGIVAGWEWLVSAITGLSPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AGISAMADTIGNVFSGLWDWLKSTFAETYNWIIDKLNYIPGVNIEAKSIPSQESSPISSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH NNLLTGGQIQNIEKGGINKEISNNAKTVTDNSKRFENVNINMQGGMTPEQLMEWQELN CCCCCCCCCCCCHHCCCCCHHCCCCCCCCCCCHHHCEEEEEECCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA