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The map label for this gene is 170023147

Identifier: 170023147

GI number: 170023147

Start: 1020712

End: 1021566

Strand: Direct

Name: 170023147

Synonym: YPK_0898

Alternate gene names: NA

Gene position: 1020712-1021566 (Clockwise)

Preceding gene: 170023143

Following gene: 170023148

Centisome position: 21.77

GC content: 44.56

Gene sequence:

>855_bases
ATGTCTAATTCACATTTAATGACTGACTGGATTTGTGTTTGCACGGAGGGGGAAACCGTTGATGGGCGTGAAATTAAACG
AAAATGGCTCACTGACGCCGCAGAAACCTATAACCCGCAATTGTATACCGCATTGTTGTGGCCTGAGCACTCCCGCAATT
TTGGGAATATGGGGCAGGTACTGGAATTAATGAGTGGGGAAGACGGTGAGGGTATCTTACGACTTTACGCTCGCCTCTGT
CCTAACCTCTCTCTAATGCAGGCCAATGTGGCTGGGCAACTGATTTTTTGTTCCGCTGAGTTTACGCCTGACGGCAACTT
TCGAGGAACGGGAAAAAGTTATCTGGAAGGGTTAGGGGTGACAGATGAACCCGCCAGTGTTTACACCGAAAGAATGCGTT
TTAACAGCCGTAATAAAAACAAACGTTATGGTGCGCTAAAGCCATTAGTTATTGATGAAGTCACACCGATTAAAGAGGCA
AGAGAAATGGCAGTAGGTAAAAATAAAAGTAAATGGCGCAGTCTGTTTAATATTCAGGACGAGGAACAGCCGGGCGAGGA
AACAGCTCCAGCACCAGACGATAAGATCCAAGTATTGGCACAGGCAGTTGCCGATTTAGAAGCACGAGTGTTGTCACTGG
AAAATAAAACAGATGCGACGGACACCGCAGTAGAAGAGGTTGTTGCAGATGTTGAAGTGGTAAAGGAAGTGGTGGATACC
GAAGATTTTGCAAAATTGCGTAATAATCTTCCGGGTATTATTAAGAACTTTGGCAAACTGGAAAATAAAATCACTACATT
GCCAAAACGTGCGCCTAATGGTGACGGTAAAAAACCGTTTAAGCACCTTATTTAA

Upstream 100 bases:

>100_bases
GGTTATATCCGAACTGAACCGAAATAAGGGCCGTGCGTCTATTAAAATAATCCGCAATACTGCCTATCTCGAAACAAGCA
CAATATTTAAAAGTAGGGTT

Downstream 100 bases:

>100_bases
TTTATACCACCTTTTAGAAAAAATTTTATTTCACCGTAAAGGTGGGGGATAGCTATGCAATTAAATCAAAGGGCGCGTCA
ATATATTGACTCATACAGCG

Product: putative capsid scaffolding protein

Products: NA

Alternate protein names: Capsid Scaffolding; Phage Capsid Scaffolding; Capsid Scaffolding Protein; Capsid Scaffolding Protein O; Phage Capsid Scaffolding Protein GpO; Phage-Related Capsid Scaffolding Protein; V Protein Bacteriophage; Scaffold Protein; Capsid Scaffolding Protein Bacteriophage Origin; Bacteriophage Protein; Bacteriophage P2 GPO Capsid Protein; Scaffold; Capsid Protein; Presumed Capsid Scaffolding Protein; Capsid Scafolding Protein; Phage-Related Capsid Scaffold Protein; Phage-Related Capsid Scaffold Bacteriophage Protein; Phage P2 Capsid Scaffolding GpO-Like Protein; Prophage Capsid Scaffolding Protein; Flagellar Biosynthesis/Type III Secretory Pathway Protein

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MSNSHLMTDWICVCTEGETVDGREIKRKWLTDAAETYNPQLYTALLWPEHSRNFGNMGQVLELMSGEDGEGILRLYARLC
PNLSLMQANVAGQLIFCSAEFTPDGNFRGTGKSYLEGLGVTDEPASVYTERMRFNSRNKNKRYGALKPLVIDEVTPIKEA
REMAVGKNKSKWRSLFNIQDEEQPGEETAPAPDDKIQVLAQAVADLEARVLSLENKTDATDTAVEEVVADVEVVKEVVDT
EDFAKLRNNLPGIIKNFGKLENKITTLPKRAPNGDGKKPFKHLI

Sequences:

>Translated_284_residues
MSNSHLMTDWICVCTEGETVDGREIKRKWLTDAAETYNPQLYTALLWPEHSRNFGNMGQVLELMSGEDGEGILRLYARLC
PNLSLMQANVAGQLIFCSAEFTPDGNFRGTGKSYLEGLGVTDEPASVYTERMRFNSRNKNKRYGALKPLVIDEVTPIKEA
REMAVGKNKSKWRSLFNIQDEEQPGEETAPAPDDKIQVLAQAVADLEARVLSLENKTDATDTAVEEVVADVEVVKEVVDT
EDFAKLRNNLPGIIKNFGKLENKITTLPKRAPNGDGKKPFKHLI
>Mature_283_residues
SNSHLMTDWICVCTEGETVDGREIKRKWLTDAAETYNPQLYTALLWPEHSRNFGNMGQVLELMSGEDGEGILRLYARLCP
NLSLMQANVAGQLIFCSAEFTPDGNFRGTGKSYLEGLGVTDEPASVYTERMRFNSRNKNKRYGALKPLVIDEVTPIKEAR
EMAVGKNKSKWRSLFNIQDEEQPGEETAPAPDDKIQVLAQAVADLEARVLSLENKTDATDTAVEEVVADVEVVKEVVDTE
DFAKLRNNLPGIIKNFGKLENKITTLPKRAPNGDGKKPFKHLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31690; Mature: 31559

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSHLMTDWICVCTEGETVDGREIKRKWLTDAAETYNPQLYTALLWPEHSRNFGNMGQV
CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHH
LELMSGEDGEGILRLYARLCPNLSLMQANVAGQLIFCSAEFTPDGNFRGTGKSYLEGLGV
HHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCHHHHHCCCC
TDEPASVYTERMRFNSRNKNKRYGALKPLVIDEVTPIKEAREMAVGKNKSKWRSLFNIQD
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCC
EEQPGEETAPAPDDKIQVLAQAVADLEARVLSLENKTDATDTAVEEVVADVEVVKEVVDT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
EDFAKLRNNLPGIIKNFGKLENKITTLPKRAPNGDGKKPFKHLI
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
SNSHLMTDWICVCTEGETVDGREIKRKWLTDAAETYNPQLYTALLWPEHSRNFGNMGQV
CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHH
LELMSGEDGEGILRLYARLCPNLSLMQANVAGQLIFCSAEFTPDGNFRGTGKSYLEGLGV
HHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEEEECCCCCCCCCCHHHHHCCCC
TDEPASVYTERMRFNSRNKNKRYGALKPLVIDEVTPIKEAREMAVGKNKSKWRSLFNIQD
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCC
EEQPGEETAPAPDDKIQVLAQAVADLEARVLSLENKTDATDTAVEEVVADVEVVKEVVDT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
EDFAKLRNNLPGIIKNFGKLENKITTLPKRAPNGDGKKPFKHLI
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA