| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is dam [C]
Identifier: 170023137
GI number: 170023137
Start: 1011942
End: 1012814
Strand: Direct
Name: dam [C]
Synonym: YPK_0888
Alternate gene names: 170023137
Gene position: 1011942-1012814 (Clockwise)
Preceding gene: 170023136
Following gene: 170023138
Centisome position: 21.58
GC content: 40.09
Gene sequence:
>873_bases ATGAAAGAAACAAAACTAAATCGCTCACCACTTAAGTGGGCTGGCTCAAAGGCGCGTATTATGCCTGTCCTACGTCCACA TTTACCTGCCGGTAAGCGATTGGTGGAGCCGTTTGCTGGTTCATGCTCTGTCATGTTGAATACTGATTATGATGAGTATT TGATTGCTGATATTAATGCGCATCTGATTAATTTTTATAATATGGCAAGGTGTGAAACTAATGATTTAATAAATATGGCT AGCTCACTATTTTTCACTGCAAACACACCAGAACAGTATTATATATTTCGTAATATTTTCAACTCGGGTAATCGTGATGA GCTATCAATGGCTGTGATTTTTCTTTATTTAAATCGTCATTGTTTTAACGGACTATGCAGATATAACAAATTGGGTGGTT TTAATGTCCCCTATGGTAAGTACAAATCTCCTTATTTTCCAGAAGCTGAAATACGTTTCTTTGCCGAGAAAGCCAAGAAA GCAATATTTATATGTTGTGACTTCTCCGAAGCATTAGAGATGACTTTGCCCGGAGATGTGATTTATTGTGATCCGCCTTA TATCCCTGCATCTATCACGGCTAACTTTACTGGCTATCATGCTGATGGATTTAATAACGACCAGCAATACCGACTATCCG TGTTATTGGCGCGCGCTGCTGAAAATGGCTGTCATGCTATTGCTTCAAATAGTGACACGCATATTAGCCGCGATCTTTAT CACAACTTTACTCTCCACGATATCGTCGCGCCTCGCTCTGTCAATTGCAAGGGTGAAGGTCGTAGCAGTGTGAGTGAAAT AATAGCGACTAAATCCCCAGCCTCAGTATCTGAGAAAATATATCGGGCTTCTAATAAGGCGATCCCATTTTGA
Upstream 100 bases:
>100_bases TAGTGATGATTGCACCATAAACATTAAGAATTAACTATAACTGTAATACATGGCGTTTTACTCGCCGGGTTTCGTATTGC CTAAAAACGGGAGTTATATA
Downstream 100 bases:
>100_bases ATAATAATATTAAATCAATCCGGTTTATAGGAGTTGATTTGGCTAATCCCGGCAGTGAACACACTGTGATGTCAGTCGAA TCAATGGAGCTAATGCTCAA
Product: DNA adenine methylase
Products: NA
Alternate protein names: M.Eco67Dam; ORF1-EC67 DAM [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKETKLNRSPLKWAGSKARIMPVLRPHLPAGKRLVEPFAGSCSVMLNTDYDEYLIADINAHLINFYNMARCETNDLINMA SSLFFTANTPEQYYIFRNIFNSGNRDELSMAVIFLYLNRHCFNGLCRYNKLGGFNVPYGKYKSPYFPEAEIRFFAEKAKK AIFICCDFSEALEMTLPGDVIYCDPPYIPASITANFTGYHADGFNNDQQYRLSVLLARAAENGCHAIASNSDTHISRDLY HNFTLHDIVAPRSVNCKGEGRSSVSEIIATKSPASVSEKIYRASNKAIPF
Sequences:
>Translated_290_residues MKETKLNRSPLKWAGSKARIMPVLRPHLPAGKRLVEPFAGSCSVMLNTDYDEYLIADINAHLINFYNMARCETNDLINMA SSLFFTANTPEQYYIFRNIFNSGNRDELSMAVIFLYLNRHCFNGLCRYNKLGGFNVPYGKYKSPYFPEAEIRFFAEKAKK AIFICCDFSEALEMTLPGDVIYCDPPYIPASITANFTGYHADGFNNDQQYRLSVLLARAAENGCHAIASNSDTHISRDLY HNFTLHDIVAPRSVNCKGEGRSSVSEIIATKSPASVSEKIYRASNKAIPF >Mature_290_residues MKETKLNRSPLKWAGSKARIMPVLRPHLPAGKRLVEPFAGSCSVMLNTDYDEYLIADINAHLINFYNMARCETNDLINMA SSLFFTANTPEQYYIFRNIFNSGNRDELSMAVIFLYLNRHCFNGLCRYNKLGGFNVPYGKYKSPYFPEAEIRFFAEKAKK AIFICCDFSEALEMTLPGDVIYCDPPYIPASITANFTGYHADGFNNDQQYRLSVLLARAAENGCHAIASNSDTHISRDLY HNFTLHDIVAPRSVNCKGEGRSSVSEIIATKSPASVSEKIYRASNKAIPF
Specific function: Methylates DNA within the sequence GATC and protects the DNA from cleavage by the restriction endonuclease MboI. May play a regulatory role in the functions of the retron [H]
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789789, Length=274, Percent_Identity=45.2554744525547, Blast_Score=249, Evalue=2e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023095 - InterPro: IPR002052 - InterPro: IPR012327 [H]
Pfam domain/function: PF02086 MethyltransfD12 [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 32686; Mature: 32686
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKETKLNRSPLKWAGSKARIMPVLRPHLPAGKRLVEPFAGSCSVMLNTDYDEYLIADINA CCCCCCCCCCCHHCCCCCEEEEEECCCCCCCHHHHHCCCCCEEEEEECCCCCEEEEECHH HLINFYNMARCETNDLINMASSLFFTANTPEQYYIFRNIFNSGNRDELSMAVIFLYLNRH HHHHHHHHHHCCHHHHHHHHHHEEEECCCCCCEEHHHHHHCCCCCCHHHHHHHHHHHHHH CFNGLCRYNKLGGFNVPYGKYKSPYFPEAEIRFFAEKAKKAIFICCDFSEALEMTLPGDV HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHEECCCCE IYCDPPYIPASITANFTGYHADGFNNDQQYRLSVLLARAAENGCHAIASNSDTHISRDLY EEECCCCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHH HNFTLHDIVAPRSVNCKGEGRSSVSEIIATKSPASVSEKIYRASNKAIPF HCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKETKLNRSPLKWAGSKARIMPVLRPHLPAGKRLVEPFAGSCSVMLNTDYDEYLIADINA CCCCCCCCCCCHHCCCCCEEEEEECCCCCCCHHHHHCCCCCEEEEEECCCCCEEEEECHH HLINFYNMARCETNDLINMASSLFFTANTPEQYYIFRNIFNSGNRDELSMAVIFLYLNRH HHHHHHHHHHCCHHHHHHHHHHEEEECCCCCCEEHHHHHHCCCCCCHHHHHHHHHHHHHH CFNGLCRYNKLGGFNVPYGKYKSPYFPEAEIRFFAEKAKKAIFICCDFSEALEMTLPGDV HHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHEECCCCE IYCDPPYIPASITANFTGYHADGFNNDQQYRLSVLLARAAENGCHAIASNSDTHISRDLY EEECCCCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHH HNFTLHDIVAPRSVNCKGEGRSSVSEIIATKSPASVSEKIYRASNKAIPF HCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1701261 [H]