Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is 170023056

Identifier: 170023056

GI number: 170023056

Start: 920836

End: 921603

Strand: Direct

Name: 170023056

Synonym: YPK_0807

Alternate gene names: NA

Gene position: 920836-921603 (Clockwise)

Preceding gene: 170023055

Following gene: 170023057

Centisome position: 19.64

GC content: 33.46

Gene sequence:

>768_bases
ATGATAAATATTAAAAAATTGACATTGAAATATTTTTATATTTTATTTTTTACACCCCACTTAGCACATGCTACGTATTA
TAATGAAGTGTCATTTGATGATTACATCGTTTTATTAGACAAAAATGAAAATGCAATTTTGCATGTAAAAAAAAACCATA
CTGACATTCAATGTGTAATTAAAAATTGGAATATAAAGTACAACAATGGCGCGGGTGTCATATCACTAACAACGGATAAG
AAGGCCATCCTTTTGGCCAATACACAGGCATATCTTTACGTAGATGAAGTGATTAATTGCAAGGAAGGGGGAGTTTCATT
ACACAAAGTCCCCGTTCCAAACTCACCCCCATTTGGCACCGTAATAGATTTAAACTTTGATAAAAAAATCTATCTTTCTG
TAGTATTAGAAGATATAAGGACCTTGAGTTATACTGCCATCGTGTCTAAATTCGATAGCAATAAAAATATAATTAATGCC
AAAGGGTTTGAAAATAAACAGACAACTAATAAAGATAATTCATTTTATTTAGAAGGATCAAGCGGCGGATACGGTGGTAA
AATATCCATAAATGGGAAGTATATCTTCCCTGTCAATCTGGACTGTTCCTCTGACTCATTCCCTGGGGTCTGGGATCTCG
AAAACAAAAAAAGAGTTGTATTCTCATCACATAAAAATAGCAGCATCACTATAGATGAAAAATGTCATAAACTTTTCAAC
GGTGTGGCCAGTCTAGAAGAACTTGGAGGGGAGTTAGTCTCAAAATAA

Upstream 100 bases:

>100_bases
GATGACAGTGTAGTGACAAAGGTCACTCAAGCGATTAATGGTGGTGACATTGGGCTGTCACAAAGAAAAGTAATGACTAA
TAACGCAAAGGGAAAATTAA

Downstream 100 bases:

>100_bases
GGGCCTCCTTAAGTTGTATAACTTCAAAAAAACTGGTCATGCATTCAATGCGGAGATCATCAGGTAAAATCCTCGCATTT
ATCTGAGAGGGTTTGATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MINIKKLTLKYFYILFFTPHLAHATYYNEVSFDDYIVLLDKNENAILHVKKNHTDIQCVIKNWNIKYNNGAGVISLTTDK
KAILLANTQAYLYVDEVINCKEGGVSLHKVPVPNSPPFGTVIDLNFDKKIYLSVVLEDIRTLSYTAIVSKFDSNKNIINA
KGFENKQTTNKDNSFYLEGSSGGYGGKISINGKYIFPVNLDCSSDSFPGVWDLENKKRVVFSSHKNSSITIDEKCHKLFN
GVASLEELGGELVSK

Sequences:

>Translated_255_residues
MINIKKLTLKYFYILFFTPHLAHATYYNEVSFDDYIVLLDKNENAILHVKKNHTDIQCVIKNWNIKYNNGAGVISLTTDK
KAILLANTQAYLYVDEVINCKEGGVSLHKVPVPNSPPFGTVIDLNFDKKIYLSVVLEDIRTLSYTAIVSKFDSNKNIINA
KGFENKQTTNKDNSFYLEGSSGGYGGKISINGKYIFPVNLDCSSDSFPGVWDLENKKRVVFSSHKNSSITIDEKCHKLFN
GVASLEELGGELVSK
>Mature_255_residues
MINIKKLTLKYFYILFFTPHLAHATYYNEVSFDDYIVLLDKNENAILHVKKNHTDIQCVIKNWNIKYNNGAGVISLTTDK
KAILLANTQAYLYVDEVINCKEGGVSLHKVPVPNSPPFGTVIDLNFDKKIYLSVVLEDIRTLSYTAIVSKFDSNKNIINA
KGFENKQTTNKDNSFYLEGSSGGYGGKISINGKYIFPVNLDCSSDSFPGVWDLENKKRVVFSSHKNSSITIDEKCHKLFN
GVASLEELGGELVSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28622; Mature: 28622

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIKKLTLKYFYILFFTPHLAHATYYNEVSFDDYIVLLDKNENAILHVKKNHTDIQCVI
CCEEEEHHHEEEEEEEECCHHHHEEEECCCCCCCEEEEEECCCCEEEEEECCCCEEEEEE
KNWNIKYNNGAGVISLTTDKKAILLANTQAYLYVDEVINCKEGGVSLHKVPVPNSPPFGT
EECEEEECCCCEEEEEECCCEEEEEECCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCE
VIDLNFDKKIYLSVVLEDIRTLSYTAIVSKFDSNKNIINAKGFENKQTTNKDNSFYLEGS
EEEECCCCEEEEHHHHHHHHHHHHEEEEECCCCCCCEEECCCCCCCCCCCCCCEEEEECC
SGGYGGKISINGKYIFPVNLDCSSDSFPGVWDLENKKRVVFSSHKNSSITIDEKCHKLFN
CCCCCCEEEECCEEEEEEEECCCCCCCCCEEECCCCCEEEEECCCCCEEEHHHHHHHHHH
GVASLEELGGELVSK
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MINIKKLTLKYFYILFFTPHLAHATYYNEVSFDDYIVLLDKNENAILHVKKNHTDIQCVI
CCEEEEHHHEEEEEEEECCHHHHEEEECCCCCCCEEEEEECCCCEEEEEECCCCEEEEEE
KNWNIKYNNGAGVISLTTDKKAILLANTQAYLYVDEVINCKEGGVSLHKVPVPNSPPFGT
EECEEEECCCCEEEEEECCCEEEEEECCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCE
VIDLNFDKKIYLSVVLEDIRTLSYTAIVSKFDSNKNIINAKGFENKQTTNKDNSFYLEGS
EEEECCCCEEEEHHHHHHHHHHHHEEEEECCCCCCCEEECCCCCCCCCCCCCCEEEEECC
SGGYGGKISINGKYIFPVNLDCSSDSFPGVWDLENKKRVVFSSHKNSSITIDEKCHKLFN
CCCCCCEEEECCEEEEEEEECCCCCCCCCEEECCCCCEEEEECCCCCEEEHHHHHHHHHH
GVASLEELGGELVSK
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA