| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is insA [H]
Identifier: 170023044
GI number: 170023044
Start: 904585
End: 904848
Strand: Direct
Name: insA [H]
Synonym: YPK_0795
Alternate gene names: 170023044
Gene position: 904585-904848 (Clockwise)
Preceding gene: 170023043
Following gene: 170023045
Centisome position: 19.29
GC content: 47.73
Gene sequence:
>264_bases ATGGCTTGCATTAACGTTCATTGTCCCCGTTGTGATTCTGCTTTGGTTTATCGACATGGTCAGAACCCTAAGGGCCAAAG CCGTTTCCGCTGCCGTGAGTGCCGCTCTGTATTCCAACTGACCTACACTTATCAGGCCAGAAAGCCCAGAGTTAAAGGGC AGATCGTTGATATGGCCTTTAACGGCGCAGGTGTGTGGGATATGGCAAGAACGCTAAAAATCGGTATCAATACCGTTATC CGCACTTTAAAAAACTCTTGCTGA
Upstream 100 bases:
>100_bases GGTAAAGAATATAAATTAAAAATAGCCGAATAATATTAATTTCGGTAATGACTCCAATTGGTTGAATTTGATGTACAATG CGATTTTTTGAGGTTTGCTC
Downstream 100 bases:
>100_bases AGCGAATAACGTCCTCGCCAGTCGCTCATCTGTGAACTCGATGAGCAGTGGAGTTTTGTCGGCAACAAGGCCCTTCAGTA GAAACTACGGAGTCATCAAT
Product: insertion element protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MACINVHCPRCDSALVYRHGQNPKGQSRFRCRECRSVFQLTYTYQARKPRVKGQIVDMAFNGAGVWDMARTLKIGINTVI RTLKNSC
Sequences:
>Translated_87_residues MACINVHCPRCDSALVYRHGQNPKGQSRFRCRECRSVFQLTYTYQARKPRVKGQIVDMAFNGAGVWDMARTLKIGINTVI RTLKNSC >Mature_86_residues ACINVHCPRCDSALVYRHGQNPKGQSRFRCRECRSVFQLTYTYQARKPRVKGQIVDMAFNGAGVWDMARTLKIGINTVIR TLKNSC
Specific function: Absolutely required for transposition of IS1 [H]
COG id: COG3677
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IS1 elements insA family [H]
Homologues:
Organism=Escherichia coli, GI1789852, Length=87, Percent_Identity=41.3793103448276, Blast_Score=79, Evalue=4e-17, Organism=Escherichia coli, GI1788204, Length=87, Percent_Identity=41.3793103448276, Blast_Score=79, Evalue=4e-17, Organism=Escherichia coli, GI1786204, Length=87, Percent_Identity=41.3793103448276, Blast_Score=79, Evalue=4e-17, Organism=Escherichia coli, GI1790747, Length=87, Percent_Identity=43.6781609195402, Blast_Score=79, Evalue=6e-17, Organism=Escherichia coli, GI87081814, Length=87, Percent_Identity=41.3793103448276, Blast_Score=79, Evalue=7e-17, Organism=Escherichia coli, GI1786471, Length=87, Percent_Identity=41.3793103448276, Blast_Score=79, Evalue=7e-17, Organism=Escherichia coli, GI1786460, Length=87, Percent_Identity=41.3793103448276, Blast_Score=79, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003220 [H]
Pfam domain/function: PF03811 Ins_element1 [H]
EC number: NA
Molecular weight: Translated: 9937; Mature: 9806
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 7.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACINVHCPRCDSALVYRHGQNPKGQSRFRCRECRSVFQLTYTYQARKPRVKGQIVDMAF CCEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE NGAGVWDMARTLKIGINTVIRTLKNSC CCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ACINVHCPRCDSALVYRHGQNPKGQSRFRCRECRSVFQLTYTYQARKPRVKGQIVDMAF CEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE NGAGVWDMARTLKIGINTVIRTLKNSC CCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6265806 [H]