| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is iutA [H]
Identifier: 170023031
GI number: 170023031
Start: 887665
End: 889845
Strand: Reverse
Name: iutA [H]
Synonym: YPK_0782
Alternate gene names: 170023031
Gene position: 889845-887665 (Counterclockwise)
Preceding gene: 170023032
Following gene: 170023028
Centisome position: 18.98
GC content: 50.3
Gene sequence:
>2181_bases ATGAAACACAAACACCTCTGGGTATTAAATCCGTGTCTGCTGGTCATGCTCACACCAGCGGCGTGGGCAGAGGATCAACT TGTGGTTTCAGCCAACCGCTCACACCGCAGCGTGGCAGAAATGGCGCAAACAACTTGGGTGATTGAAGGCCTTGAACTTG AACAACAAGTTCAAGGCGGCCTGGAAATCAAAGACATCTTGGCTCAATTGATCCCAGGTATCGACGTCAGCAGCCAAGGC CGTACCAACTACGGCATGAACATGCGTGGCCGCTCAATCATGGTGATGATCGACGGCGTGCGGCTGAACTCTTCACGTAG CGACAGCCGCCAACTCGATTCGATCGATCCGTTTAATATTGCACACATTGAAGTCATCTCCGGTGCGACGTCACTTTATG GCGGGGGTAGCACGGGGGGCTTGATCAATATCGTGACCAAAAAAGGCCAGGAAGGAAAACAGGTTGAGTTGCAAATTGGC GGCAAAACCGGCTTTAACAGCCATAACGACCACGATGAGAACATCTCGGCCGCCATGAGTGGGGGGACTGAGCGCGCATT CGGCCGATTCTCTGTTTCTTATCAACGTTATGGGGGGTGGTACGACGGCAAAGGCAATGAGGTTTTGATCGACAACACCC AGACCGGCTTGCAATATTCTAACCGTCTGGACGTGATGGGCACGGGAACCCTCAATATCGACGAAAACCAGCAATTGCAG CTAACCACTCAGTATTTCAACAGCGAATCCGATGGCAAACACGGCTTGTATCTGGGGCAAAACTTCTCAGCAGTAACGGG TACCGGGCAGGCCTCCAACAGCGCAGCGCTAAATTCAGACCGTATTCCGGGTACCGAACGCCATCTCATCAACTTGCAAT ACTCCAACACGGATTTCTGGGGGCAGGATTTAGTGGCGCAAGTGTATTACCGTGATGAATCACTAACCTTCTACCCATTC CCAACACTGAAAGATGGCAAGGTGAGCACTATCGGTGCATCACAGCAAAAAACCGATTTCTACGGCAGTAAACTGACATT GAACAGTGAACCTATCGATAGCCTAACACTGACTTACGGTATCGATTTGGAACATGAAAGTTTCAATGCCAATCAACAGT TCTTTAATCTGGCGAAGGCACAGCAATCCGGCGGCATGACGTTAGAAAATGCCTACAACGTTGGCCGTTACCCAAGTTAT ACCACCACCAACCTGGCTCCCTTCTTACAAACCCGCTATGACATCAACCCGATTTTCACTCTGAGCGGCGGTGTGCGTTA CCAGTACACAGAGAACAAGGTTGATGATTTTGTGGGTTACGCACAACAACAAGCGATTGCCAGCGGCTCCGCGACTTCCG CTGATCCCGTACCTGGTGGGAAAACGGATTACAACAACTTCCTGTTCAATGCCGGTTTACTGGCGCACCTGACAGAAAGC CAGCAGACCTGGTTCAACTTTTCACAAGGATTTGAGATCCCGGATCTGGCGAAATATTACGGTTCTGGCTCCTACACGCT GGTTAACGGTCACTATCAGTTGCAAAACAGTGTCAACGTGAATGACTCCAAACTGGAGGGCATCAAGGTTGATTCCTATG AGCTGGGCTGGCGCTATACCGGTGATAACCTGCGCACCCAAATGGCGGGTTATTACTCGCTTTCTGATCAGACTATCTCG ATCAACAAAACAGACATGACCATCAATGTGTTACCGGATAAGCGCCGAATCTATGGGGTAGAAGGCGCAGTAGATTACTT CTTCGATAACAGCGAATGGAGTGCCGGTGCAACATTTAACCTAATTAAGTCGGAAACTAAGGTTAGCGGTAAGTGGCAGA AACTGACTATCGATGCTGCCAGCCCGTCGAAAGCCACCGCCTACATTGGCTGGGCACCGGGTGATTGGAATCTGCGCGTG CAATCCCAACAAACGTTCGATGTTTCCGATAGCAAGGGTGACAAAATAGACGGTTACAACACCATCGATTTTCTCAGTAG CTACGCCCTACCCGTGGGAAAACTCAGCTTCAGTATCGAAAACTTGCTGGACAAAGAGTACACCACCGTTTGGGGTCAGC GCGCACCGATTCTGTATAGCCCAACCTACGGCTCACCCAACTTATACAGCTATAAGGGCCGTGGCCGGACTTTTGGTGTG AACTACTCAGTGTTGTTCTGA
Upstream 100 bases:
>100_bases ATCCCGTGCTCAACTGCATCGACATTTAAATACGGCACCAAGCGTCAAAATATAACAGGCGAATTTTAACGCCATAGACC AATATTGGGAGAAAGTCACA
Downstream 100 bases:
>100_bases TAGATAGTGTTGTTCTGATAGAGACGGGCGTTATCTCGTCTTCCGCCCGTTCATCACCCATCAATAATTAAGGGGCTTTG CGCAAAATTAAGACATTGCG
Product: TonB-dependent siderophore receptor
Products: NA
Alternate protein names: Cloacin receptor [H]
Number of amino acids: Translated: 726; Mature: 726
Protein sequence:
>726_residues MKHKHLWVLNPCLLVMLTPAAWAEDQLVVSANRSHRSVAEMAQTTWVIEGLELEQQVQGGLEIKDILAQLIPGIDVSSQG RTNYGMNMRGRSIMVMIDGVRLNSSRSDSRQLDSIDPFNIAHIEVISGATSLYGGGSTGGLINIVTKKGQEGKQVELQIG GKTGFNSHNDHDENISAAMSGGTERAFGRFSVSYQRYGGWYDGKGNEVLIDNTQTGLQYSNRLDVMGTGTLNIDENQQLQ LTTQYFNSESDGKHGLYLGQNFSAVTGTGQASNSAALNSDRIPGTERHLINLQYSNTDFWGQDLVAQVYYRDESLTFYPF PTLKDGKVSTIGASQQKTDFYGSKLTLNSEPIDSLTLTYGIDLEHESFNANQQFFNLAKAQQSGGMTLENAYNVGRYPSY TTTNLAPFLQTRYDINPIFTLSGGVRYQYTENKVDDFVGYAQQQAIASGSATSADPVPGGKTDYNNFLFNAGLLAHLTES QQTWFNFSQGFEIPDLAKYYGSGSYTLVNGHYQLQNSVNVNDSKLEGIKVDSYELGWRYTGDNLRTQMAGYYSLSDQTIS INKTDMTINVLPDKRRIYGVEGAVDYFFDNSEWSAGATFNLIKSETKVSGKWQKLTIDAASPSKATAYIGWAPGDWNLRV QSQQTFDVSDSKGDKIDGYNTIDFLSSYALPVGKLSFSIENLLDKEYTTVWGQRAPILYSPTYGSPNLYSYKGRGRTFGV NYSVLF
Sequences:
>Translated_726_residues MKHKHLWVLNPCLLVMLTPAAWAEDQLVVSANRSHRSVAEMAQTTWVIEGLELEQQVQGGLEIKDILAQLIPGIDVSSQG RTNYGMNMRGRSIMVMIDGVRLNSSRSDSRQLDSIDPFNIAHIEVISGATSLYGGGSTGGLINIVTKKGQEGKQVELQIG GKTGFNSHNDHDENISAAMSGGTERAFGRFSVSYQRYGGWYDGKGNEVLIDNTQTGLQYSNRLDVMGTGTLNIDENQQLQ LTTQYFNSESDGKHGLYLGQNFSAVTGTGQASNSAALNSDRIPGTERHLINLQYSNTDFWGQDLVAQVYYRDESLTFYPF PTLKDGKVSTIGASQQKTDFYGSKLTLNSEPIDSLTLTYGIDLEHESFNANQQFFNLAKAQQSGGMTLENAYNVGRYPSY TTTNLAPFLQTRYDINPIFTLSGGVRYQYTENKVDDFVGYAQQQAIASGSATSADPVPGGKTDYNNFLFNAGLLAHLTES QQTWFNFSQGFEIPDLAKYYGSGSYTLVNGHYQLQNSVNVNDSKLEGIKVDSYELGWRYTGDNLRTQMAGYYSLSDQTIS INKTDMTINVLPDKRRIYGVEGAVDYFFDNSEWSAGATFNLIKSETKVSGKWQKLTIDAASPSKATAYIGWAPGDWNLRV QSQQTFDVSDSKGDKIDGYNTIDFLSSYALPVGKLSFSIENLLDKEYTTVWGQRAPILYSPTYGSPNLYSYKGRGRTFGV NYSVLF >Mature_726_residues MKHKHLWVLNPCLLVMLTPAAWAEDQLVVSANRSHRSVAEMAQTTWVIEGLELEQQVQGGLEIKDILAQLIPGIDVSSQG RTNYGMNMRGRSIMVMIDGVRLNSSRSDSRQLDSIDPFNIAHIEVISGATSLYGGGSTGGLINIVTKKGQEGKQVELQIG GKTGFNSHNDHDENISAAMSGGTERAFGRFSVSYQRYGGWYDGKGNEVLIDNTQTGLQYSNRLDVMGTGTLNIDENQQLQ LTTQYFNSESDGKHGLYLGQNFSAVTGTGQASNSAALNSDRIPGTERHLINLQYSNTDFWGQDLVAQVYYRDESLTFYPF PTLKDGKVSTIGASQQKTDFYGSKLTLNSEPIDSLTLTYGIDLEHESFNANQQFFNLAKAQQSGGMTLENAYNVGRYPSY TTTNLAPFLQTRYDINPIFTLSGGVRYQYTENKVDDFVGYAQQQAIASGSATSADPVPGGKTDYNNFLFNAGLLAHLTES QQTWFNFSQGFEIPDLAKYYGSGSYTLVNGHYQLQNSVNVNDSKLEGIKVDSYELGWRYTGDNLRTQMAGYYSLSDQTIS INKTDMTINVLPDKRRIYGVEGAVDYFFDNSEWSAGATFNLIKSETKVSGKWQKLTIDAASPSKATAYIGWAPGDWNLRV QSQQTFDVSDSKGDKIDGYNTIDFLSSYALPVGKLSFSIENLLDKEYTTVWGQRAPILYSPTYGSPNLYSYKGRGRTFGV NYSVLF
Specific function: Receptor for cloacin DF13/aerobactin [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1790405, Length=176, Percent_Identity=28.9772727272727, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 80361; Mature: 80361
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHKHLWVLNPCLLVMLTPAAWAEDQLVVSANRSHRSVAEMAQTTWVIEGLELEQQVQGG CCCCEEEEECCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHEEEEECCCHHHHHHCC LEIKDILAQLIPGIDVSSQGRTNYGMNMRGRSIMVMIDGVRLNSSRSDSRQLDSIDPFNI CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCE AHIEVISGATSLYGGGSTGGLINIVTKKGQEGKQVELQIGGKTGFNSHNDHDENISAAMS EEEEEECCCCEECCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHC GGTERAFGRFSVSYQRYGGWYDGKGNEVLIDNTQTGLQYSNRLDVMGTGTLNIDENQQLQ CCCCCCCEEEEEEEECCCCEECCCCCEEEEECCCCCCEECCEEEEEECCEEECCCCCEEE LTTQYFNSESDGKHGLYLGQNFSAVTGTGQASNSAALNSDRIPGTERHLINLQYSNTDFW EEEEECCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC GQDLVAQVYYRDESLTFYPFPTLKDGKVSTIGASQQKTDFYGSKLTLNSEPIDSLTLTYG CHHHEEEEEEECCCEEEEECCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCEEEEEE IDLEHESFNANQQFFNLAKAQQSGGMTLENAYNVGRYPSYTTTNLAPFLQTRYDINPIFT EEECCCCCCCCHHHHHHHHHHHCCCEEEHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEE LSGGVRYQYTENKVDDFVGYAQQQAIASGSATSADPVPGGKTDYNNFLFNAGLLAHLTES ECCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCC QQTWFNFSQGFEIPDLAKYYGSGSYTLVNGHYQLQNSVNVNDSKLEGIKVDSYELGWRYT HHHHCCCCCCCCCCHHHHHHCCCCEEEEECEEEEECCCCCCCCCCCCEEECCEEECEEEC GDNLRTQMAGYYSLSDQTISINKTDMTINVLPDKRRIYGVEGAVDYFFDNSEWSAGATFN CCCCEEEEEEEEEECCCEEEEEECEEEEEECCCCCEEEEECCEEEEEECCCCCCCCCEEE LIKSETKVSGKWQKLTIDAASPSKATAYIGWAPGDWNLRVQSQQTFDVSDSKGDKIDGYN EEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEECCCCEEECCCCCCCCCCCCC TIDFLSSYALPVGKLSFSIENLLDKEYTTVWGQRAPILYSPTYGSPNLYSYKGRGRTFGV HHHHHHHHCCCCHHHEEEHHHHHCCHHHHHCCCCCCEEEECCCCCCCEEEECCCCEEEEE NYSVLF EEEEEC >Mature Secondary Structure MKHKHLWVLNPCLLVMLTPAAWAEDQLVVSANRSHRSVAEMAQTTWVIEGLELEQQVQGG CCCCEEEEECCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHEEEEECCCHHHHHHCC LEIKDILAQLIPGIDVSSQGRTNYGMNMRGRSIMVMIDGVRLNSSRSDSRQLDSIDPFNI CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCE AHIEVISGATSLYGGGSTGGLINIVTKKGQEGKQVELQIGGKTGFNSHNDHDENISAAMS EEEEEECCCCEECCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHC GGTERAFGRFSVSYQRYGGWYDGKGNEVLIDNTQTGLQYSNRLDVMGTGTLNIDENQQLQ CCCCCCCEEEEEEEECCCCEECCCCCEEEEECCCCCCEECCEEEEEECCEEECCCCCEEE LTTQYFNSESDGKHGLYLGQNFSAVTGTGQASNSAALNSDRIPGTERHLINLQYSNTDFW EEEEECCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC GQDLVAQVYYRDESLTFYPFPTLKDGKVSTIGASQQKTDFYGSKLTLNSEPIDSLTLTYG CHHHEEEEEEECCCEEEEECCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCEEEEEE IDLEHESFNANQQFFNLAKAQQSGGMTLENAYNVGRYPSYTTTNLAPFLQTRYDINPIFT EEECCCCCCCCHHHHHHHHHHHCCCEEEHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEE LSGGVRYQYTENKVDDFVGYAQQQAIASGSATSADPVPGGKTDYNNFLFNAGLLAHLTES ECCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCC QQTWFNFSQGFEIPDLAKYYGSGSYTLVNGHYQLQNSVNVNDSKLEGIKVDSYELGWRYT HHHHCCCCCCCCCCHHHHHHCCCCEEEEECEEEEECCCCCCCCCCCCEEECCEEECEEEC GDNLRTQMAGYYSLSDQTISINKTDMTINVLPDKRRIYGVEGAVDYFFDNSEWSAGATFN CCCCEEEEEEEEEECCCEEEEEECEEEEEECCCCCEEEEECCEEEEEECCCCCCCCCEEE LIKSETKVSGKWQKLTIDAASPSKATAYIGWAPGDWNLRVQSQQTFDVSDSKGDKIDGYN EEECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEECCCCEEECCCCCCCCCCCCC TIDFLSSYALPVGKLSFSIENLLDKEYTTVWGQRAPILYSPTYGSPNLYSYKGRGRTFGV HHHHHHHHCCCCHHHEEEHHHHHCCHHHHHCCCCCCEEEECCCCCCCEEEECCCCEEEEE NYSVLF EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA