| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023002
Identifier: 170023002
GI number: 170023002
Start: 846791
End: 847861
Strand: Direct
Name: 170023002
Synonym: YPK_0753
Alternate gene names: NA
Gene position: 846791-847861 (Clockwise)
Preceding gene: 170023001
Following gene: 170023003
Centisome position: 18.06
GC content: 51.73
Gene sequence:
>1071_bases ATGAGACAGCCAAAAACTATCTTGGTGGTTGGTGGGCAGGGGGCCGTAGGGCAAGCGGCTGTCACGCAATTGTCTCAGCG AGGTTATCGGGTGATCACCGCTGGGAGGCGGGAACATCCTAATCATCCCCATCATATTGTATTCGATCTCTTTGATCATA AAGCCCTTGCTGATAGCTGCCGTCAGGTGGATTTAGTGCTAAACGCCGCTGGCCCTGCCTCTGATATCGAAGCGCATATT GCCCTGACGGCATTAGCCGAGGGGAAACATTATGTGGATGTGGCCGGTGATCCTGTTATCGAACGAACATTATTAGTGCC GATGGCGGCCTCTTCCTCGGCCTGTGTATTGGGGGCTGGGTTTATTCCTGGATTGGCCGCCATGTTACCGCGGTATGCCG TTGACTGTTTGTCGCCGGTGACTCAGCTAACGGTCTACAGCGGAGGTATCGAGACCTTTACGCCGACCTCTGCCCACGAT TTTCTGTCCAGCCAATACACGGGCCGGGCACAGGGTAAAAGCGGTTATGTGTGGTATGACGGAGGGTTGTGTAAAGAGAG TCTGAAAAAAGCGGTATCGATACCAACAGCACAACGGCTATTTGATGCTCTGCCTTATTTCAGTTTTGAACATGAGCGGC TGGTCACCGTGCATTCGCTCTCCCATCTTGCTGCTTATAACCTGATCGCCGATCAACGCTTACTCGTTGGGCTTGGCGGG GAAGGGGGGGCGGCGGCTCAAACACTGATAGCCTTTAGCCAACAATTGACGAGGCAAGAGGGGGAGCAACAGCATCTCTT TATGGTAGCGAAGGGGTTATTAGCCGGGCAGCCTGCCGCATTGCAACTTCAAATCCGCTTTACGAACAGCTATCAATTGA CGGGCACTATTGCTGCTTTGGCCGCCCACCACGTGTTATGTACCCACCGTGTGGGATTGTATTGGTTAACGGACTTACTG CCCATCAAGGTATTGCTGTCACAACTTAATGAATTGGCTTTATTCAGTCATTTCCATATCCACTGTCAACTCGATAATAA CGCAGTGAATTTTCAGGAGGGGGCATTATGA
Upstream 100 bases:
>100_bases TAAACAGCCTCACCTTGCCAGGCGATCACTTTACGTGCCTGTCGGCGGATAATATCTCGCCACTCATTCAGCATCTTGAA CAATGCAAAGGAGTGCGGGG
Downstream 100 bases:
>100_bases TCCAACCTCAGAAAATCGTGGTCTGCGGCACTTTATTTGGGCAGGTTTATCTCTCCGCCTTTAAGACGGCCTTTGAGAAG GGAGCGTTGGCGGGCATTCT
Product: saccharopine dehydrogenase
Products: NA
Alternate protein names: NAD-Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MRQPKTILVVGGQGAVGQAAVTQLSQRGYRVITAGRREHPNHPHHIVFDLFDHKALADSCRQVDLVLNAAGPASDIEAHI ALTALAEGKHYVDVAGDPVIERTLLVPMAASSSACVLGAGFIPGLAAMLPRYAVDCLSPVTQLTVYSGGIETFTPTSAHD FLSSQYTGRAQGKSGYVWYDGGLCKESLKKAVSIPTAQRLFDALPYFSFEHERLVTVHSLSHLAAYNLIADQRLLVGLGG EGGAAAQTLIAFSQQLTRQEGEQQHLFMVAKGLLAGQPAALQLQIRFTNSYQLTGTIAALAAHHVLCTHRVGLYWLTDLL PIKVLLSQLNELALFSHFHIHCQLDNNAVNFQEGAL
Sequences:
>Translated_356_residues MRQPKTILVVGGQGAVGQAAVTQLSQRGYRVITAGRREHPNHPHHIVFDLFDHKALADSCRQVDLVLNAAGPASDIEAHI ALTALAEGKHYVDVAGDPVIERTLLVPMAASSSACVLGAGFIPGLAAMLPRYAVDCLSPVTQLTVYSGGIETFTPTSAHD FLSSQYTGRAQGKSGYVWYDGGLCKESLKKAVSIPTAQRLFDALPYFSFEHERLVTVHSLSHLAAYNLIADQRLLVGLGG EGGAAAQTLIAFSQQLTRQEGEQQHLFMVAKGLLAGQPAALQLQIRFTNSYQLTGTIAALAAHHVLCTHRVGLYWLTDLL PIKVLLSQLNELALFSHFHIHCQLDNNAVNFQEGAL >Mature_356_residues MRQPKTILVVGGQGAVGQAAVTQLSQRGYRVITAGRREHPNHPHHIVFDLFDHKALADSCRQVDLVLNAAGPASDIEAHI ALTALAEGKHYVDVAGDPVIERTLLVPMAASSSACVLGAGFIPGLAAMLPRYAVDCLSPVTQLTVYSGGIETFTPTSAHD FLSSQYTGRAQGKSGYVWYDGGLCKESLKKAVSIPTAQRLFDALPYFSFEHERLVTVHSLSHLAAYNLIADQRLLVGLGG EGGAAAQTLIAFSQQLTRQEGEQQHLFMVAKGLLAGQPAALQLQIRFTNSYQLTGTIAALAAHHVLCTHRVGLYWLTDLL PIKVLLSQLNELALFSHFHIHCQLDNNAVNFQEGAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38388; Mature: 38388
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQPKTILVVGGQGAVGQAAVTQLSQRGYRVITAGRREHPNHPHHIVFDLFDHKALADSC CCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCHHHHHHH RQVDLVLNAAGPASDIEAHIALTALAEGKHYVDVAGDPVIERTLLVPMAASSSACVLGAG HEEEEEEECCCCCCCCHHEEEEEEEECCCEEEEECCCCHHHHEEEEEECCCCCCEEEECC FIPGLAAMLPRYAVDCLSPVTQLTVYSGGIETFTPTSAHDFLSSQYTGRAQGKSGYVWYD HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEC GGLCKESLKKAVSIPTAQRLFDALPYFSFEHERLVTVHSLSHLAAYNLIADQRLLVGLGG CCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEECC EGGAAAQTLIAFSQQLTRQEGEQQHLFMVAKGLLAGQPAALQLQIRFTNSYQLTGTIAAL CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEHHHHHHH AAHHVLCTHRVGLYWLTDLLPIKVLLSQLNELALFSHFHIHCQLDNNAVNFQEGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEECCCCCCC >Mature Secondary Structure MRQPKTILVVGGQGAVGQAAVTQLSQRGYRVITAGRREHPNHPHHIVFDLFDHKALADSC CCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCHHHHHHH RQVDLVLNAAGPASDIEAHIALTALAEGKHYVDVAGDPVIERTLLVPMAASSSACVLGAG HEEEEEEECCCCCCCCHHEEEEEEEECCCEEEEECCCCHHHHEEEEEECCCCCCEEEECC FIPGLAAMLPRYAVDCLSPVTQLTVYSGGIETFTPTSAHDFLSSQYTGRAQGKSGYVWYD HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEC GGLCKESLKKAVSIPTAQRLFDALPYFSFEHERLVTVHSLSHLAAYNLIADQRLLVGLGG CCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEECC EGGAAAQTLIAFSQQLTRQEGEQQHLFMVAKGLLAGQPAALQLQIRFTNSYQLTGTIAAL CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEHHHHHHH AAHHVLCTHRVGLYWLTDLLPIKVLLSQLNELALFSHFHIHCQLDNNAVNFQEGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA