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The map label for this gene is gbpA [H]

Identifier: 170022941

GI number: 170022941

Start: 751068

End: 752465

Strand: Reverse

Name: gbpA [H]

Synonym: YPK_0692

Alternate gene names: 170022941

Gene position: 752465-751068 (Counterclockwise)

Preceding gene: 170022942

Following gene: 170022940

Centisome position: 16.05

GC content: 47.78

Gene sequence:

>1398_bases
ATGAAATACAGAACGCCCAATATTATCAGCCGCAACAAAAGTAATGGTATCTCTTCGTTTCATGGCCACGTGTTTTCTCC
CGCTTCACGTGTCTATTTTGCCTGGCTAGCGGGTCAAATTGATGAAGGTGCCCTGAACCAACGCGAGGCCGGTAAATTTT
TCCCTGAAACAGCCGAGGGCCTTTCGGACCCCTTTGCACCTGATGATCAGCCTAATAGTTTGCCTCCATTAGATGGCAAA
ATCGCCAGTGCTAACCAACTAACGGGGCAATTTTTGGATGAACCCGGTACCCACTGGCAAAAACATGATGTGTTAGCTGG
CGATATATTAGAAATATCATGGGGTTATGGGAAGGAACATAAAACCCGTCGCTGGAGCTATTTTATGACACGGTCTGATT
GGAATCCCAACCTTCCTCTTAGCCGAGCTCAGTTTGAAAAAGAGCCGTTTTATATGGTTCAACTGAATGAAAAACCTCAC
TGGTCGGTAAATGCAGAGTTTGCATTAATGCCTCTAGACCCTACAGTACATGAGGTTATACTGCCGCAGCGCAGCGGTTA
TCATGTCTTGCTGGCGGTCTGGGACGTGGCTGATACCGGCAATGCTTTTTATAATGTGATTGATTTGGACTTCGTGGGCG
AAGGTGGCAGTGATCAACCTCTCCCCCCTGCAAACCTACATGCGACTAGCATCACCAAGGATTCAGTATCACTTGCCTGG
AATGCCCCTGTTTCCGATGTTGCTCATTACCAGATTTATCGCGATGGCGTCTTCCTGGCACAAACAACTACATTGAACTG
GATTGATTCAAACCTGAAAGCCGGTACCAAATATATCTATACGGTAAGCACGATCGATACAACGGGCATCGCCTCCTCTC
TCAGTTCACCTTTGTTGGTAGAAACGCTAGCGGAGAACAGTGACAACGCACCGCCTTCTGCCCCTAAAAGCTTACATAGC
ATGAACGTCACCGAGAACAGTCTGGAGTTGATGTGGGGAACATCGACGAGTTCGACTGGGCTGAAAAGCTATCTGGTCTA
TCGGGAAGGAGAAGAAATTGCTGAGGTTCTGGTACCACAATACACTTTCCAAGAGACCGGATTGTCACCTGATACCACCT
ACCGTTATTTTGTCGCAGCACAGGATACTCAAGGCCGTTTATCCGTACCGAGTAACGTCTATTCTGTTACAACCCTTGCC
AAATCTGATGGTGGTGGTGATGGCGGCGGTAATGGCAGTATTCACCCTGCCTGGAAACTTGGTGCAACCTATAACGTTGG
CGATAAAGTCAGTAATCTCGGTAGAGATTGGGTGTGTATAGCTTTCCATATAGCCCATGAGCCGACCTGGGCTCCAGGGG
ATATAGACTATGAGACGCTTTGGTCGCTCATTTCGTAA

Upstream 100 bases:

>100_bases
CATTATGGCAGCTCGTCGTACAGCGCTAAATTTCGCGGGTTCGGTACCTTATACCCTAAAGAATTCCACTGAAAACATTA
ATATTATTAAGGAATATATG

Downstream 100 bases:

>100_bases
TCGCTGTTTTTGATAAACATAGCCAATGAGTTTGGCAATGAGGTTAATAAAAGGGTCAGCATTGCTGGCCCTTTTACTTT
TATTTTTACTCTTACTCTTA

Product: fibronectin type III domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MKYRTPNIISRNKSNGISSFHGHVFSPASRVYFAWLAGQIDEGALNQREAGKFFPETAEGLSDPFAPDDQPNSLPPLDGK
IASANQLTGQFLDEPGTHWQKHDVLAGDILEISWGYGKEHKTRRWSYFMTRSDWNPNLPLSRAQFEKEPFYMVQLNEKPH
WSVNAEFALMPLDPTVHEVILPQRSGYHVLLAVWDVADTGNAFYNVIDLDFVGEGGSDQPLPPANLHATSITKDSVSLAW
NAPVSDVAHYQIYRDGVFLAQTTTLNWIDSNLKAGTKYIYTVSTIDTTGIASSLSSPLLVETLAENSDNAPPSAPKSLHS
MNVTENSLELMWGTSTSSTGLKSYLVYREGEEIAEVLVPQYTFQETGLSPDTTYRYFVAAQDTQGRLSVPSNVYSVTTLA
KSDGGGDGGGNGSIHPAWKLGATYNVGDKVSNLGRDWVCIAFHIAHEPTWAPGDIDYETLWSLIS

Sequences:

>Translated_465_residues
MKYRTPNIISRNKSNGISSFHGHVFSPASRVYFAWLAGQIDEGALNQREAGKFFPETAEGLSDPFAPDDQPNSLPPLDGK
IASANQLTGQFLDEPGTHWQKHDVLAGDILEISWGYGKEHKTRRWSYFMTRSDWNPNLPLSRAQFEKEPFYMVQLNEKPH
WSVNAEFALMPLDPTVHEVILPQRSGYHVLLAVWDVADTGNAFYNVIDLDFVGEGGSDQPLPPANLHATSITKDSVSLAW
NAPVSDVAHYQIYRDGVFLAQTTTLNWIDSNLKAGTKYIYTVSTIDTTGIASSLSSPLLVETLAENSDNAPPSAPKSLHS
MNVTENSLELMWGTSTSSTGLKSYLVYREGEEIAEVLVPQYTFQETGLSPDTTYRYFVAAQDTQGRLSVPSNVYSVTTLA
KSDGGGDGGGNGSIHPAWKLGATYNVGDKVSNLGRDWVCIAFHIAHEPTWAPGDIDYETLWSLIS
>Mature_465_residues
MKYRTPNIISRNKSNGISSFHGHVFSPASRVYFAWLAGQIDEGALNQREAGKFFPETAEGLSDPFAPDDQPNSLPPLDGK
IASANQLTGQFLDEPGTHWQKHDVLAGDILEISWGYGKEHKTRRWSYFMTRSDWNPNLPLSRAQFEKEPFYMVQLNEKPH
WSVNAEFALMPLDPTVHEVILPQRSGYHVLLAVWDVADTGNAFYNVIDLDFVGEGGSDQPLPPANLHATSITKDSVSLAW
NAPVSDVAHYQIYRDGVFLAQTTTLNWIDSNLKAGTKYIYTVSTIDTTGIASSLSSPLLVETLAENSDNAPPSAPKSLHS
MNVTENSLELMWGTSTSSTGLKSYLVYREGEEIAEVLVPQYTFQETGLSPDTTYRYFVAAQDTQGRLSVPSNVYSVTTLA
KSDGGGDGGGNGSIHPAWKLGATYNVGDKVSNLGRDWVCIAFHIAHEPTWAPGDIDYETLWSLIS

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 51213; Mature: 51213

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50853 FN3 ; PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYRTPNIISRNKSNGISSFHGHVFSPASRVYFAWLAGQIDEGALNQREAGKFFPETAEG
CCCCCCCCCCCCCCCCCCHHCCCEECCHHHEEEEEECCCCCCCCCCHHHCCCCCCHHHHH
LSDPFAPDDQPNSLPPLDGKIASANQLTGQFLDEPGTHWQKHDVLAGDILEISWGYGKEH
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEECCEEEEECCCCCCC
KTRRWSYFMTRSDWNPNLPLSRAQFEKEPFYMVQLNEKPHWSVNAEFALMPLDPTVHEVI
CCEEEEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCCEEECCCEEEEECCCCHHHHC
LPQRSGYHVLLAVWDVADTGNAFYNVIDLDFVGEGGSDQPLPPANLHATSITKDSVSLAW
CCCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEE
NAPVSDVAHYQIYRDGVFLAQTTTLNWIDSNLKAGTKYIYTVSTIDTTGIASSLSSPLLV
CCCHHHHHEEEEEECCEEEEEEEEEEEECCCCCCCCEEEEEEEECCCHHHHHHCCCCHHH
ETLAENSDNAPPSAPKSLHSMNVTENSLELMWGTSTSSTGLKSYLVYREGEEIAEVLVPQ
HHHHCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEECCHHHHHHHCCC
YTFQETGLSPDTTYRYFVAAQDTQGRLSVPSNVYSVTTLAKSDGGGDGGGNGSIHPAWKL
EEHHHCCCCCCCEEEEEEEECCCCCCEECCCCEEEEEEEECCCCCCCCCCCCCCCCEEEC
GATYNVGDKVSNLGRDWVCIAFHIAHEPTWAPGDIDYETLWSLIS
CCEECCCHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHC
>Mature Secondary Structure
MKYRTPNIISRNKSNGISSFHGHVFSPASRVYFAWLAGQIDEGALNQREAGKFFPETAEG
CCCCCCCCCCCCCCCCCCHHCCCEECCHHHEEEEEECCCCCCCCCCHHHCCCCCCHHHHH
LSDPFAPDDQPNSLPPLDGKIASANQLTGQFLDEPGTHWQKHDVLAGDILEISWGYGKEH
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEECCEEEEECCCCCCC
KTRRWSYFMTRSDWNPNLPLSRAQFEKEPFYMVQLNEKPHWSVNAEFALMPLDPTVHEVI
CCEEEEEEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCCEEECCCEEEEECCCCHHHHC
LPQRSGYHVLLAVWDVADTGNAFYNVIDLDFVGEGGSDQPLPPANLHATSITKDSVSLAW
CCCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEE
NAPVSDVAHYQIYRDGVFLAQTTTLNWIDSNLKAGTKYIYTVSTIDTTGIASSLSSPLLV
CCCHHHHHEEEEEECCEEEEEEEEEEEECCCCCCCCEEEEEEEECCCHHHHHHCCCCHHH
ETLAENSDNAPPSAPKSLHSMNVTENSLELMWGTSTSSTGLKSYLVYREGEEIAEVLVPQ
HHHHCCCCCCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEECCHHHHHHHCCC
YTFQETGLSPDTTYRYFVAAQDTQGRLSVPSNVYSVTTLAKSDGGGDGGGNGSIHPAWKL
EEHHHCCCCCCCEEEEEEEECCCCCCEECCCCEEEEEEEECCCCCCCCCCCCCCCCEEEC
GATYNVGDKVSNLGRDWVCIAFHIAHEPTWAPGDIDYETLWSLIS
CCEECCCHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA