| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
Click here to switch to the map view.
The map label for this gene is icc [H]
Identifier: 170022908
GI number: 170022908
Start: 717215
End: 718057
Strand: Direct
Name: icc [H]
Synonym: YPK_0657
Alternate gene names: 170022908
Gene position: 717215-718057 (Clockwise)
Preceding gene: 170022907
Following gene: 170022909
Centisome position: 15.29
GC content: 50.65
Gene sequence:
>843_bases ATGGCCTTGCCTGCAGATAGTCATAATACGCATAACTATCTGGTTGGGGGGCGGCAAAAACAAGGATACCATTTGGAAAG CCTGTTTAAACTGCCTATGGCGAGTGGGGCCAGGGTTAGAATTTTACAAATAACAGATACCCACCTCTTTGCTGGCGAAC ATGAGACATTGCTGGGTGTGAATACTTTTCACAGCTATCGCGCGGTATTGGACGCGATTATTGCGGAACAGCACCCGTTT GATCTGGTTGTTGCCACGGGCGATTTGGCTCAGGACCACTCTGTCGCCGCCTATCAGAATTTTGCGAAGGGAATATCTCG CCTGCCTGTGCCTTGCGTTTGGCTGCCCGGTAATCACGATTTCCAGCCAGCAATGGTTGGTGCATTGGCTGAGGCGGGGA TTGCCCCTTCAAAACAGGTCCTGGCGGGAGAACACTGGCAGATCCTGTTGCTGGACAGCCAAGTATTTGGCGTACCTTAT GGTGAGTTGAGCGACTATCAGTTGGAGTGGATGGAGCGCTGTCTAATCGCGTATCCGGAACATTACACCTTGATATTGTT GCACCATCATCCTATGCCGTCAGGTTGCACCTGGCTTGATCAACACAGTTTGCGCAACGCGCATATGTTGGCGGCGATCC TGACTCGTTATCCCCGAGTTACTACGTTATTGTGCGGTCATATTCATCAAGATTTAGATCTTGACTGGTATGGTAAGCGC TTGCTAGCCAGCCCTTCGACCTGTGTGCAATTTAAACCACATTGTACTAACTTTACGCTTGATGCTGTGGCACCAGGGTG GCGTTATCTCGATTTACTGCCTGACGGGGGGGCTGGAAACTGA
Upstream 100 bases:
>100_bases AGCGGGATGAAAAGCATCAAATTAACCAGTTTCTTGCTGATTGGTTGCGCTATTGTTTGGCGCATGGAGCGGTGGCCGTT CCGGTTTGTTAGACAGACTT
Downstream 100 bases:
>100_bases GGTTCATCGGTTAGACAGTGACGAATTTTGCCCTGATATGGACTCGGATGGTTATTGATGAGTACACTTTTATATATTCA TGGTTTTAATAGCTCTCCCC
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MALPADSHNTHNYLVGGRQKQGYHLESLFKLPMASGARVRILQITDTHLFAGEHETLLGVNTFHSYRAVLDAIIAEQHPF DLVVATGDLAQDHSVAAYQNFAKGISRLPVPCVWLPGNHDFQPAMVGALAEAGIAPSKQVLAGEHWQILLLDSQVFGVPY GELSDYQLEWMERCLIAYPEHYTLILLHHHPMPSGCTWLDQHSLRNAHMLAAILTRYPRVTTLLCGHIHQDLDLDWYGKR LLASPSTCVQFKPHCTNFTLDAVAPGWRYLDLLPDGGAGN
Sequences:
>Translated_280_residues MALPADSHNTHNYLVGGRQKQGYHLESLFKLPMASGARVRILQITDTHLFAGEHETLLGVNTFHSYRAVLDAIIAEQHPF DLVVATGDLAQDHSVAAYQNFAKGISRLPVPCVWLPGNHDFQPAMVGALAEAGIAPSKQVLAGEHWQILLLDSQVFGVPY GELSDYQLEWMERCLIAYPEHYTLILLHHHPMPSGCTWLDQHSLRNAHMLAAILTRYPRVTTLLCGHIHQDLDLDWYGKR LLASPSTCVQFKPHCTNFTLDAVAPGWRYLDLLPDGGAGN >Mature_279_residues ALPADSHNTHNYLVGGRQKQGYHLESLFKLPMASGARVRILQITDTHLFAGEHETLLGVNTFHSYRAVLDAIIAEQHPFD LVVATGDLAQDHSVAAYQNFAKGISRLPVPCVWLPGNHDFQPAMVGALAEAGIAPSKQVLAGEHWQILLLDSQVFGVPYG ELSDYQLEWMERCLIAYPEHYTLILLHHHPMPSGCTWLDQHSLRNAHMLAAILTRYPRVTTLLCGHIHQDLDLDWYGKRL LASPSTCVQFKPHCTNFTLDAVAPGWRYLDLLPDGGAGN
Specific function: Affects the expression of the lacZ gene [H]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789410, Length=252, Percent_Identity=71.031746031746, Blast_Score=360, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013622 - InterPro: IPR004843 - ProDom: PD587589 [H]
Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]
EC number: NA
Molecular weight: Translated: 31153; Mature: 31022
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPADSHNTHNYLVGGRQKQGYHLESLFKLPMASGARVRILQITDTHLFAGEHETLLGV CCCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCEEEEEEEECCEEECCCCCEEEEE NTFHSYRAVLDAIIAEQHPFDLVVATGDLAQDHSVAAYQNFAKGISRLPVPCVWLPGNHD HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC FQPAMVGALAEAGIAPSKQVLAGEHWQILLLDSQVFGVPYGELSDYQLEWMERCLIAYPE CCHHHHHHHHHCCCCCCHHHHCCCCEEEEEECCEEECCCCCCCCCHHHHHHHHHHHCCCC HYTLILLHHHPMPSGCTWLDQHSLRNAHMLAAILTRYPRVTTLLCGHIHQDLDLDWYGKR CEEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHCHH LLASPSTCVQFKPHCTNFTLDAVAPGWRYLDLLPDGGAGN HHCCCCCEEEECCCCCCEEEECCCCCCEEEEEECCCCCCC >Mature Secondary Structure ALPADSHNTHNYLVGGRQKQGYHLESLFKLPMASGARVRILQITDTHLFAGEHETLLGV CCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCEEEEEEEECCEEECCCCCEEEEE NTFHSYRAVLDAIIAEQHPFDLVVATGDLAQDHSVAAYQNFAKGISRLPVPCVWLPGNHD HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCC FQPAMVGALAEAGIAPSKQVLAGEHWQILLLDSQVFGVPYGELSDYQLEWMERCLIAYPE CCHHHHHHHHHCCCCCCHHHHCCCCEEEEEECCEEECCCCCCCCCHHHHHHHHHHHCCCC HYTLILLHHHPMPSGCTWLDQHSLRNAHMLAAILTRYPRVTTLLCGHIHQDLDLDWYGKR CEEEEEEECCCCCCCCCCHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHCHH LLASPSTCVQFKPHCTNFTLDAVAPGWRYLDLLPDGGAGN HHCCCCCEEEECCCCCCEEEECCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]